MATLAB tutorial for programmers [closed] - matlab

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I'm getting some new students soon, who will be writing MATLAB code. They're new to MATLAB, but they have experience coding in Java and C++.
I'm going to have them go through the Getting Started section of the MATLAB help. In addition, I want to give a small tutorial with the goal to prevent them from making some of the most common mistakes people make when switching to MATLAB (e.g. "MATLAB starts counting at 1"), and show them some features that they may not be aware of when coming from other languages (e.g. "you can subtract a scalar directly from an array, and for vectors, there's bsxfun").
What are the most important things I should tell them?

I agree with previous answers, but I'd say indexing is the first and the most important and complex concept in studying MATLAB. I saw many C programmers starting with MATLAB just write loops, a lot of loops, something ridiculous like
for i=1:10
a(i)=i;
end
instead of simple a=1:10;.
So I'd suggest them to read about matrix programming concepts:
How to create simple vectors and matrices
Which variables can be used for indexing
How to create and apply indexes
Logical operations and functions, logical and numeric indexes (find function)
Indexing right and left side of expression
Difference between indexing numerical matrices and cell arrays
How to use indexes as output from different functions, like sort, unique, ismember, etc.
You cannot apply indexes to intermediate results
As for productivity, I would add that knowing how to use editor's cell mode is very useful.

Enough snippy comments, here's something of an answer too:
The Matlab desktop: what all the windows are for, dragging code from the history back into the command window, the variable inspector, etc.
Plotting: not just the plot command, but how to use the plot GUI tools, and how to create an M-file from a graphic.
M-files for scripts and functions, and the key differences between them.
M-Lint, the profiler.
Use Matlab as a vehicle for teaching the perils and pitfalls of floating-point arithmetic.
Getting help: at the command line, on the web, documentation, the file exchange, ...
Set path and the current working directory.
Importing data from files, exporting data to files, loading and saving.
That should be enough to keep them busy for an hour or so.
To clarify, I propose these topics to help you teach your students to avoid common Matlab errors including;
Unproductive use of the tool, retyping commands which can easily be recalled from the history, using C (or Java) style file reading commands instead of uuimport, slowly typing scripts to draw graphics when Matlab can do it for you, wondering what all the little orange lines in the editor right margin mean and the squiggly underlines, trying to figure things out for themselves when the help facilities could tell them, tons of other stuff that many much more experience Matlab users have taken ages to learn.
Floating point arithmetic is not real.
and probably a lot of other stuff too.

For those coming from C-family languages, the element-wise operators are new. It took me a couple of months to discover the ./ and .* operators. Before that, I used to write for loops for element-wise operations. So perhaps that's something that should be pointed out.

With respect to unexpected or non-intuitive MATLAB features that may cause them confusion, there are some good pointers in this question:
Corner Cases, Unexpected and Unusual MATLAB
With respect to cool time-saving/efficiency tricks, this other question has some nice examples:
What are your favourite MATLAB/Octave programming tricks?
And for a few potentially more advanced topics, you can refer to the answers to this question:
MATLAB interview questions?
Now for my $0.02. Based on the sorts of questions I've seen asked most frequently on SO, I'd say you will want to make sure they have a good understanding of the following concepts:
Reading and writing data files of different formats, such as using CSVREAD, DLMREAD, TEXTREAD, FREAD, FSCANF, LOAD, and all their write equivalents.
How to deal effectively with cell arrays.
The different image formats, how these are represented, and how to modify them (which will involve a discussion of various data types and how to deal with multi-dimensional arrays).
How to use handle graphics to control the appearance of various graphics objects.
And here are some neat features that are already implemented in MATLAB that may save them some time and effort:
Functions for performing various array operations, like KRON, DIAG, and TRIU.
Functions to create specialized matrices, like HANKEL and TOEPLITZ.
Predefined dialog boxes, like UIGETFILE and INPUTDLG.

MATLAB is conceptually in some ways very different from other languages you mentioned:
cells are used were Java uses upcasting
global and persistent variables are static in Java
gui handles being just numbers of type double
nested functions are closures, neither Java nor C/C++ has such feature
seldom used private and #TYPE folders for visibility scoping
array handling tricks
very easy interoperability with Java/COM/.Net using MATLAB syntax
variadic function arguments, handling of function arguments with varargin / varargout
memory management

Related

Should I use Object Oriented Programming in MATLAB?

I have an issue, where I need to handle a lot of figures in matlab and the code is starting to get messy. Different kinds of plot objects are added to the code in different stages and some have legends and some does not. The problem is that there is no NULL legends. As soon as an object is created, so is a legend. However, until the legend(handles,...) is called they are not shown. This means that if things are plotted and some, need a legend entry and some not, a lot of handles needs to be passed around.
Now, the file is starting to be quite long, about 1500 lines, with some globals that spans over many functions in the file and so. To prevent the "Do not use globals" comments to pour in, yes I know globals are normally unnecessary, but the code was like that when I laid my hands on it. However, now the code is getting more and more messy and I think about using Object Oriented Programming (OOP) to handle figures.
The idea is to have the custom figure objects handling themselves and thus make more readable code, split up in smaller blocks. The idea is to have a design like
class Figure
private:
MainFrame;
SubFrame;
Lines;
Legends;
Title;
X-Label;
Y-Label;
Methods:
To be defined, for example formatting plotting, edit title,…
The complete design is not really thought through completely, but the point of this questions is really about using OOP in matlab. What I have seen so far it os not really used were much. Are there a reason for this? Could anyone give pros and cons to OOP in matlab? Is OOP recommended or not in matlab?
I have added the information about my issue since I understand that OOP is more needed for large complex issues, so an answer would preferably take the drawbacks in comparison with the complexity of the problem into account. (For example, do never use OOP in matlab, do it only when you have complex problems, do it whenever you like,...)
Okay the question is about OOP in Matlab - but is it not OOP in Matlab in your organisation?
By that I mean to think who is going to use/develop and maintain the code going forward.
Background: I have used OOP for my own toolbox (because its complex/large enough to warrant it - and I develop/maintain it) - however in consultancy jobs for the majority of my clients I create functions (which in some instances call my toolbox) - because when the job is finished they get the source code and the majority are (much) more comfortable working with functions rather than classes.
In summary - I decide on whether to use OOP on the job specifics and the situation where the code will be used (developed & maintained) in the future.
So back to your topic - I would consider where you think the code is going to go and who will develop/maintain it. Will they be comfortable with classes - or will they be more comfortable with functions?
FYI: Last year I was talking to Mathworks and they said that they run multiple "Intro to Matlab" courses per week - but only 1 "Matlab Classes" per quarter!! That gives you an indication on the level of Matlab class use in industry.

Numerical Integral of large numbers in Fortran 90

so I have the following Integral that i need to do numerically:
Int[Exp(0.5*(aCosx + bSinx + cCos2x + dSin2x))] x=0..2Pi
The problem is that the output at any given value of x can be extremely large, e^2000, so larger than I can deal with in double precision.
I havn't had much luck googling for the following, how do you deal with large numbers in fortran, not high precision, i dont care if i know it to beyond double precision, and at the end i'll just be taking the log, but i just need to be able to handle the large numbers untill i can take the log..
Are there integration packes that have the ability to handle arbitrarily large numbers? Mathematica clearly can.. so there must be something like this out there.
Cheers
This is probably an extended comment rather than an answer but here goes anyway ...
As you've already observed Fortran isn't equipped, out of the box, with the facility for handling such large numbers as e^2000. I think you have 3 options.
Use mathematics to reduce your problem to one which does (or a number of related ones which do) fall within the numerical range that your Fortran compiler can compute.
Use Mathematica or one of the other computer algebra systems (eg Maple, SAGE, Maxima). All (I think) of these can be integrated into a Fortran program (with varying degrees of difficulty and integration).
Use a library for high-precision (often called either arbitray-precision or multiple-precision too) arithmetic. Your favourite search engine will turn up a number of these for you, some written in Fortran (and therefore easy to integrate), some written in C/C++ or other languages (and therefore slightly harder to integrate). You might start your search at Lawrence Berkeley or the GNU bignum library.
(Yes I know that I wrote that you have 3 options, but your question suggests that you aren't ready to consider this yet) You could write your own high-/arbitrary-/multiple-precision functions. Fortran provides everything you need to construct such a library, there is a lot of work already done in the field to learn from, and it might be something of interest to you.
In practice it generally makes sense to apply as much mathematics as possible to a problem before resorting to a computer, that process can not only assist in solving the problem but guide your selection or construction of a program to solve what's left of the problem.
I agree with High Peformance Mark that the best option here numerically is to use analytics to scale or simplify the result first.
I will mention that if you do want to brute force it, gfortran (as of 4.6, with the libquadmath library) has support for quadruple precision reals, which you can use by selecting the appropriate kind. As long as your answers (and the intermediate results!) don't get too much bigger than what you're describing, that may work, but it will generally be much slower than double precision.
This requires looking deeper at the problem you are trying to solve and the behavior of the underlying mathematics. To add to the good advice already provided by Mark and Jonathan, consider expanding the exponential and trig functions into Taylor series and truncating to the desired level of precision.
Also, take a step back and ask why you are trying to accomplish by calculating this value. As an example, I recently had to debug why I was getting outlandish results from a property correlation which was calculating vapor pressure of a fluid to see if condensation was occurring. I spent a long time trying to understand what was wrong with the temperature being fed into the correlation until I realized the case causing the error was a simulation of vapor detonation. The problem was not in the numerics but in the logic of checking for condensation during a literal explosion; physically, a condensation check made no sense. The real problem was the code was asking an unnecessary question; it already had the answer.
I highly recommend Forman Acton's Numerical Methods That (Usually) Work and Real Computing Made Real. Both focus on problems like this and suggest techniques to tame ill-mannered computations.

About to begin learning MATLAB on my own

so essentially I have the task to learn matlab decently well in the next few weeks, and I want to really be able to impress the people i'm learning it for, so if you guys have advice, I would greatly appreciate it.
What I'm dealing with Throughout the course of my job I will be dealing largely in two areas.
Formatting and importing data from excel
Interpreting the data in a meaningful way.
I realize the second category is extremely broad, but essentially i'm working with arrays of pricing information to set some standard price for a commodity, so the analysis that I will be doing will be less computationally heavy and will focus more on error getting the data in correctly and accurately and making sure all of the functions that I want to perform are executed correctly. Very basic stuff.
So here's what I'm looking for:
What are the most important topics so that I can import data from excel into matlab perfectly?
What should I study just to get basic functions down that will be applied to entire matrices/arrays?
What should I study prior to studying anything else to get a firm foundation in the subject? (So I don't make stupid syntax errors, etc.)?
Your help is greatly appreciated :)
The first two things you'll want to learn about are (1) the Matlab GUI and (2) the basics of Matlab syntax. A quick visit to the Getting Started section of the Matlab documentation will do you wonders. It should take you less than a day to get through the basics. Do note that the Matlab documentation is generally excellent, and you should use it often.
Beyond that, there are a number of questions here about importing Excel into Matlab (importing from excel, exporting to excel), and there's some excellent docs on the Mathworks site as well (xlsread, xlswrite). Read them and become familiar with the details and common problems. Good luck!
Since you will be using excel it is likely the data you import could come out in cell format. Look into the differences between indexing using matrices and cells. Also, learn early on the difference between [operator] and .[operator] for vector calculations. The second one is element-wise and will most likely solve a lot of issues you'll come across if your records are meant to only relate to one row/column of data
Perhaps you have gained the MATLAB skills you need now, but hopefully this will help someone following the same path later.
The Math Works (developers of MATLAB) run a site called MATLAB Cody.
This site offers a range of problems and a web based MATLAB interpreter so you can test your solutions. When you have a correct solution, you can compare with other solutions to the same problem. Then you can look up the functions others have used in the online MATLAB documentation for more understanding.
The problems focus on regular expressions and cell manipulation which will be very relevant to importing and manipulating Excel data.

Matlab vs Aforge vs OpenCV

I am about to start a project in visual image-processing and have no had experience with Matlab, Aforge, OpenCV and was wondering if anyone had any experiences with these different software packages.
I was also wondering which of the three packages were most efficient I assume OpenCV but has anyone had any experience?
Thanks
Jamie.
The question you need to ask yourself is which is more important - your time or the computer's time. If your task is really simple, you may be able to code it up in MATLAB and have it work right off the bat. MATLAB is by far the easiest for development - a scripted language with built-in memory management, a huge array of provided functions, and a great interface for displaying and manipulating data while debugging.
On the other hand, MATLAB is at least an order of magnitude slower than compiled openCV code for many tasks. This is especially true if you use the intel performance primitives libraries.
If you know how to code in MATLAB, I would suggest writing and debugging your algorithms in that language, then porting them to c/c++ with openCV for speed. If there are only a couple of simple functions that you need to speed up, you can call c code from MATLAB, but it's hard to get this working right the first few times you try it, so you're probably better off just rewriting your finished code entirely in c/c++
First, please elaborate about your project's needs. It has the biggest impact on the choice, in addition to other factors - your general programming knowledge (If you haven't dealt with dot net but just with C++, AForge is not a good choice, for example).
Generally,
Both AForge and OpenCV has a built-in interface to .Net, and OpenCV also with C++, python, and more. Matlab might be more efficient, but if you don't have any experience with it - you should also learn its syntax. Take it into consideration.
Matlab probably has the largest variety of functions, but it is more complicated than the other projects. OpenCV and AForge themselves have some differences - see them described in this StackOverflow question/ answers.
I worked last year in two similar projects with cars on the highway. Afaik, Matlab allows to process only one picture frame at a time (surely you could elaborate an algorithm to compute a stream) but using Simulink you can process the stream directly.
On the other hand, i found AForge a lot friendlier and easier to use since you can easily adjust the processing parameters from a GUI (not so fast/easy) to do in Matlab/simulink.
I'd go for Aforge.Net. It's also fast enough if you're worrying about processing speed. (using 640x480)
If you are asking about using one of these in .net,easily you can get info by this:
1-matlab mostly used in simulation of projects not the End-prototype project; my numer : 30;
2-aforge (as I'v used in many project) if you do not need the circular process like capturing image, or recognition of something in images or ... you'll find it very good, cause it is easy to use but useful for single processes; my number : 50
3-opencv very good at speed and useful for circular processes, for example you can capture images from a webcam and Instantly cartoonize it without any delay, But not easy-to-use as aforge. I like it anyway cause of its speed and MANY functions it gives us mostly anything we need in programming; my number : 80
Dr.Taha - Tahasoft.net

Using MATLAB's plotting features as an interactive part of a Fortran program

Although many of you will have a decent idea of what I'm aiming at, just from reading the title -- allow me a simple introduction still.
I have a Fortran program - it consists of a program, some internal subroutines, 7 modules with its own procedures, and ... uhmm, that's it.
Without going into much detail, for I don't think it's necessary at this point, what would be the easiest way to use MATLAB's plotting features (mainly plot(x,y) with some customizations) as an interactive part of my program ? For now I'm using some of my own custom plotting routines (based on HPGL and Calcomp's routines), but just as part of an exercise on my part, I'd like to see where this could go and how would it work (is it even possible what I'm suggesting?). Also, how much effort would it take on my part ?
I know this subject has been rather extensively described in many "tutorials" on the net, but for some reason I have trouble finding the really simple yet illustrative introductory ones. So if anyone can post an example or two, simple ones, I'd be really grateful. Or just take me by the hand and guide me through one working example.
platform: IVF 11.something :) on Win XP SP2, Matlab 2008b
The easiest way would be to have your Fortran program write to file, and have your Matlab program read those files for the information you want to plot. I do most of my number-crunching on Linux, so I'm not entirely sure how Windows handles one process writing a file and another reading it at the same time.
That's a bit of a kludge though, so you might want to think about using Matlab to call the Fortran program (or parts of it) and get data directly for plotting. In this case you'll want to investigate Creating Fortran MEX Files in the Matlab documentation. This is relatively straightforward to do and would serve your needs if you were happy to use Matlab to drive the process and Fortran to act as a compute service. I'd look in the examples distributed with Matlab for simple Fortran MEX files.
Finally, you could call Matlab from your Fortran program, search the documentation for Calling the Matlab Engine. It's a little more difficult for me to see how this might fit your needs, and it's not something I'm terribly familiar with.
If you post again with more detail I may be able to provide more specific tips, but you should probably start rolling your sleeves up and diving in to MEX files.
Continuing the discussion of DISLIN as a solution, with an answer that won't fit into a comment...
#M. S. B. - hello. I apologize for writing in your answer, but these comments are much too short, and answering a question in the form of an answer with an answer is ... anyway ...
There is the Quick Plot feature of DISLIN -- routine QPLOT needs only three arguments to plot a curve: X array, Y array and number N. See Chapter 16 of the manual. Plus only several additional calls to select output device and label the axes. I haven't used this, so I don't know how good the auto-scaling is.
Yes, I know of Quickplot, and it's related routines, but it is too fixed for my needs (cannot change anything), and yes, it's autoscaling is somewhat quircky. Also, too big margins inside the graf.
Or if you want to use the power of GRAF to setup your graph box, there is subroutine GAXPAR to automatically generate recommended values. -2 as the first argument to LABDIG automatically determines the number of digits in tick-mark labels.
Have you tried the routines?
Sorry, I cannot find the GAXPAR routine you're reffering to in dislin's index. Are you sure it is called exactly like that ?
Reply by M.S.B.: Yes, I am sure about the spelling of GAXPAR. It is the last routine in Chapter 4 of the DISLIN 9.5 PDF manual. Perhaps it is a new routine? Also there is another path to automatic scaling: SETSCL -- see Chapter 6.
So far, what I've been doing (apart from some "duck tape" solutions) is
use dislin; implicit none
real, dimension(5) :: &
x = [.5, 2., 3., 4., 5.], &
y = [10., 22., 34., 43., 15.]
real :: xa, xe, xor, xstp, &
ya, ye, yor, ystp
call setpag('da4p'); call metafl('xwin');
call disini(); call winkey('return');
call setscl(x,size(x),'x');
call setscl(y,size(y),'y')
call axslen(1680,2376) !(8/10)*2100 and 2970, respectively
call setgrf('name','name','line','line')
call incmrk(1); call hsymbl(3);
call graf(xa, xe, xor, xstp, ya, ye, yor, ystp); call curve(x,y,size(x))
call disfin()
end
which will put the extreme values right on the axis. Do you know perhaps how could I go to have one "major tick margin" on the outside, as to put some area between the curve and the axis (while still keeping setscl's effects) ?
Even if you don't like the built-in auto-scaling, if you are already using DISLIN, rolling your own auto-scaling will be easier than calling Fortran from MATLAB. You can use the Fortran intrinsic functions minval and maxval to find the smallest and largest values in the data, than write a subroutine to round outwards to "nice" round values. Similarly, a subroutine to decide on the tick-mark spacing.
This is actually not so easy to accomplish (and ideas to prove me wrong will be gladly appreciated). Or should I say, it is easy if you know the rough range in which your values will lie. But if you don't, and you don't know
whether your values will lie in the range of 13-34 or in the 1330-3440, then ...
... if I'm on the wrong track completely here, please, explain if you ment something different. My english is somewhat lacking, so I can only hope the above is understandable.
Inside a subroutine to determine round graph start/end values, you could scale the actual min/max values to always be between 1 and 10, then have a table to pick nice round values, then unscale back to the correct range.
--
Dump Matlab because its proprietary, expensive, bloated/slow and codes are not easy to parallelize.
What you should do is use something on the lines of DISLIN, PLplot, GINO, gnuplotfortran etc.