I'm not able to run simple .sml file in emacs. Please, help me.
Standard ML of New Jersey v110.76 [built: Sun Jul 14 09:59:19 2013]
- use "s.sml" ;
[opening s.sml]
[use failed: Io: openIn failed on "s.sml", Win32TextPrimIO:openRd: failed]
uncaught exception Error
raised at: ../compiler/TopLevel/interact/interact.sml:24.14-24.28
Thanks,
Darshan
I would suggest the following
1.Close Emacs,then open it
2.Create new file by C-x C-f
3.enter valid sml code in the file wc you created and named test.sml say
4.C-x C-s to save it
5.M-x run-sml and press return twice
6.In the sml REPL enter use "test.sml";press return
7.This is it!!!
Make sure that the directory before you run sml is the same one as the one where the file exists. Otherwise, you must use the file's absolute path. Take a look at this question which deals with the same problem (and suggests it might be an issue with file not being specified correctly).
Related
Currently I am working a project that has have been using the pathlib library so I can work on my Windows desktop when I need too and on my MacBook Pro. Essentially be able to work between both operating systems. I have not have any issues at all until right now. Here is the set up:
I have a pipeline set up to automatically save a .joblib and a whole lot of .png files that will go to a directory called
output_dir = Path('../Trained_Models/Differential_gene_analysis/A Kidney Cancer Transcriptome Molecular Signature Identifies Tumors with Tumor Thrombus/Models train on TCGA data and test on Rodriguez data/Oct-XX-20XX')
For example, if I want to save a .joblib file under the name RandomForest_TumorThrombus_104.joblib,I would use the command
joblib.dump(model ,output_dir / 'RandomForest_TumorThrombus_104.joblib')
On my MacBook Pro, I have no issues when this is ran, but on Windows it gives me the following error
FileNotFoundError: [Errno 2] No such file or directory: '..\\Trained_Models\\Differential_gene_analysis\\A Kidney Cancer Transcriptome Molecular Signature Identifies Tumors with Tumor Thrombus\\Models train on TCGA data and test on Rodriguez data\\Oct-17-2022\\RandomForest_TumorThrombus_104.joblib'
I have tried to use the .resolve() method to get the absolute path but still gives me the same error. I have tried to experiment to try to see what is goin on such as using os.path.exists(). When using the os.path.exists() method I get True for the follwoing command:
os.path.exists(output_dir)
So it does indeed recognize that the directory exists. The next thing I tried was to rename the file to something like dddddd.joblib and that worked. But I find that only a few names for the file would allow me to save the files. During debug I found that the most recent Traceback occurs here:
with open(filename, 'wb') as f:```
I was wondering if anyone here had any idea what was going on here and how I can fix this issue? Please and Thank you.
The solution was to enable long paths on Windows.
Hi would like to have multiple kickstart files which use a central kickstart file for the bulk of the install and a second file for the small differences. I'm building DVDs for distribution.
The first ks contains small config and has a %include line which points to a common ks file which should do most of the work.
I'm having trouble with %include line.
Fist of all have I understood what %include is for?
Second I think I have the syntax wrong because when I boot I get the following error message:
unable to open input kickstart file: Could not open/read file:///mnt/sysimage/media/dvd/ks/common.cfg
I am installing from a DVD what is the correct path or syntax to the files stored in a sub directory called /ks/ of the DVD's root?
I have tried the following:
%include /mnt/sysimage/media/dvd/ks/common.cfg
%include cdrom:/ks/common.cfg
Does anyone have any working examples?
Thanks in advance for your support
I eventually found part of the answer
%include /mnt/stage2/ks/common.cfg
The dvd is mounted as stage2
However I now get an error message saying it cant read the file
%%include
I can see the file and less it if I hit ctrl + alt + F1
Does anyone have a working simple example of how this should be written?
Open your isolinux/isolinux.cfg from the OS and give the ks file path as below . You can enter your kick start option in boot: prompt of dvd
label 1
kernel vmlinuz
append initrd=initrd.img nofb skipddc lang= devfs=nomount ramdisk_size=8192 ks=cdrom:/option1.cfg 1
label 2
kernel vmlinuz
append initrd=initrd.img nofb skipddc lang= devfs=nomount ramdisk_size=8192 ks=cdrom:/option2 2
label 3
kernel vmlinuz
append initrd=initrd.img nofb skipddc lang= devfs=nomount ramdisk_size=8192 ks=cdrom:/option3.cfg 3
Then edit /isolinux/boot.msg and add the enter the below details
Select installation:
1) option 1
2) option 2
3) option 3
I'm trying to start up WildFly 8 with a custom start.bat file that calls standalone.bat and then also a custom property file. When I run my start.bat I get this error in the command line:
C:\PWServer8>propworks_start.bat
C:\PWServer8\bin>call standalone.bat -P=../propworks/conf/propworks.properties -b 10.10.100.122
Calling "C:\PWServer8\bin\standalone.conf.bat"
Files\Java\jdk1.7.0_40"" was unexpected at this time.
I've done a search for "was unexpected at this time" within all the files in my WildFly folder but nothing turned up so I couldn't pinpoint where the error is coming from. Here is my custom start.bat and afterwards is my property file. If anyone knows what's going on it would be a big help.
propworks_start.bat
C:
cd C:\PWServer8\bin
SET JAVA_HOME="C:\Program Files\Java\jdk1.7.0_40"
call standalone.bat -P=../propworks/conf/propworks.properties -b 10.10.100.122
propworks.properties
#PROPworks Configuration Properties
#Wed Jun 18 17:18:03 EDT 2014
propworks.bind.address=10.10.100.122
propworks.database.class=Oracle10g
propworks.database.connection.sql=select 1 From Dual
propworks.database.desc=support#mcosrvorcl001
propworks.database.dialect=com.airit.propworks.server.dialect.PWOracleDialect
propworks.database.driver=oracle
propworks.database.password=-5522f65bbe2cc1c6
propworks.database.schema=uc2014
propworks.database.url=jdbc\:oracle\:thin\:#10.10.201.10\:1521\:bsdev
propworks.database.user=uc2014
propworks.http.port=8080
propworks.indb.use=NONE
propworks.jdk.home=C\:\\Program Files\\Java\\jdk1.7.0_40
propworks.messaging.port=5445
propworks.remoting.port=4447
archiver.enabled=N
orafin.database.driver=oracle
orafin.database.password=
orafin.database.user=
org.quartz.dataSource.QUARTZ.jndiURL=java\:/propworksDS
org.quartz.dataSource.QUARTZ_NO_TX.jndiURL=java\:/quartzDS
org.quartz.jobStore.class=org.quartz.impl.jdbcjobstore.JobStoreCMT
org.quartz.jobStore.dataSource=QUARTZ
org.quartz.jobStore.driverDelegateClass=org.quartz.impl.jdbcjobstore.StdJDBCDelegate
org.quartz.jobStore.nonManagedTXDataSource=QUARTZ_NO_TX
org.quartz.jobStore.selectWithLockSQL=SELECT * FROM {0}LOCKS WHERE LOCK_NAME \= ? FOR UPDATE
org.quartz.jobStore.tablePrefix=QRTZ_
org.quartz.scheduler.instanceName=DefaultQuartzScheduler
org.quartz.scheduler.rmi.export=false
org.quartz.scheduler.rmi.proxy=false
org.quartz.scheduler.xaTransacted=false
org.quartz.threadPool.class=org.quartz.simpl.SimpleThreadPool
org.quartz.threadPool.threadCount=3
org.quartz.threadPool.threadPriority=9
psfin.database.driver=oracle
psfin.database.password=
psfin.database.user=
pwarchiver.database.driver=oracle
pwarchiver.database.password=
pwarchiver.database.user=
Two solutions:
1) move java to folder that does not have spaces in it.
2) double quote path when you set it
SET JAVA_HOME=""C:\Program Files\Java\jdk1.7.0_40""
add \ similar below :
SET JAVA_HOME=C:\Program Files\Java\jdk1.7.0_40\
this is caused by the space in front of C:\Program , so what u need to do is changing your JAVA file in c:program files \java to another file without spaces , and then in top of your file write :
SET JAVA_HOME=""NEW DIRECTORY WITHOUT SPACE\Java\jdk1.7.0_40""
this worked for me.
when I run stanford LLDA tmt scala models, I encounter a few problems. One of them is a thread error when I try to do inference with LLDA tmt model. The code I am running is exactly the one provided by Shreyas Karnik in the sourceforge link,
#Skarab: Here are the links to the code which I used to bit.ly/ocK2T9 (learning) and bit.ly/qIWb6C (inference) please let me know if you still encounter any errors.
The error message is,
Command started: Fri Jun 21 21:34:48 CDT 2013
java -Dscalanlp.distributed.hub=socket://crick7.mayo.edu:41080/hub -Dscalanlp.distributed.id=/tmt/0 -Xmx100000m edu.stanford.nlp.tmt.TMTMain "/data4/bsi/nlp/s110067.sharp/bioask/tmtModels/example-7-llda-infer.scala"
Loading model ...
TSVFile("test.csv") ~> IDColumn(1) ~> Column(2) ~> TokenizeWith(SimpleEnglishTokenizer.V1() ~> CaseFolder() ~> WordsAndNumbersOnlyFilter() ~> MinimumLengthFilter(3))
Generating output ...
[Concurrent] 128 permits
[Concurrent] 128 permits
Exception in thread "Thread-3" java.lang.IndexOutOfBoundsException: 1
at scala.collection.LinearSeqOptimized$class.apply(LinearSeqOptimized.scala:51)
at scala.collection.immutable.List.apply(List.scala:45)
at scalanlp.stage.Column.map(ColumnSelectors.scala:51)
at scalanlp.stage.Column.map(ColumnSelectors.scala:46)
at scalanlp.stage.generic.Mapper$$anonfun$apply$1$$anonfun$apply$2.apply(Mapper.scala:36)
at scalanlp.stage.Item.map(Item.scala:32)
at scalanlp.stage.generic.Mapper$$anonfun$apply$1.apply(Mapper.scala:36)
at scalanlp.stage.generic.Mapper$$anonfun$apply$1.apply(Mapper.scala:36)
at scala.collection.Iterator$$anon$19.next(Iterator.scala:335)
at scala.collection.Iterator$$anon$19.next(Iterator.scala:335)
at edu.stanford.nlp.tmt.data.concurrent.Concurrent$$anonfun$map$2.apply(Concurrent.scala:96)
at edu.stanford.nlp.tmt.data.concurrent.Concurrent$$anonfun$map$2.apply(Concurrent.scala:88)
at edu.stanford.nlp.tmt.data.concurrent.Concurrent$$anon$4.run(Concurrent.scala:45)
Would you give help? highly appreciate it!
This is a known issue of tmt-0.4.0 for many users. tmt-0.2.1 works just fine.
But the support for tmt-0.4.0 has been discontinued and for tmt-0.2.1 even before that.
You can check out http://mallet.cs.umass.edu/, which also has easy to start GUIs available such as http://www.themacroscope.org/?page_id=391.
Check any .csv files for DOS/Unix incompatibility.
My experience may be relevant:
I was also getting the error java.lang.IndexOutOfBoundsException, when running tmt-0.4.0 from a command line on Windows. My workflow had a python program splitting my data set into training and test .csv files. But they were written in DOS mode. See for example,
http://www.cs.toronto.edu/~krueger/csc209h/tut/line-endings.html
A confirmation of this is that when opening them in Excel, there was an extra line, and when opening them in Emacs, there's a telltale ^M.
I ran dos2unix on the .csv files, and then the TMT Scala programs worked.
I installed moodle 1.9.12 and now I want to use Algebra notation in content. I enable "TeX Notation" and "Algebra Notation" in administrator panel and also install mimetext and dvips and Imagemagic on the server. fortunately Tex Notation works fine but I got the following error for Algebra:
sh: /var/www/html/moodle/filter/tex/mimetex.linux: not found
The shell command
"/var/www/html/moodle/filter/tex/mimetex.linux" -e "/var/www/moodledata/filter/algebra/de06d6c44d98ba4e42dffca988bf530b.gif" -- '\Large \frac{\sin\left(z\right)}{x^{2}+y^{2}}'
returned status = 127
File size of mimetex executable /var/www/html/moodle/filter/tex/mimetex.linux is 830675
The file permissions are: 100775
The md5 checksum of the file is 56bcc40de905ce92ebd7b083c76e019e
Image not found!
Note: /var/www/html/moodle/filter/tex/mimetex.linux exists on the server and is executable!!!
What is the problem?? Any idea?????
From what you have described, calling the general tex filter debug page works and does not show up the same error.
/filter/tex/texdebug.php works, but /filter/algebra/algebradebug.php does not.
If this is the case, perhaps you could check for an open_basedir, or safe_mode_exec_dir being set to include the current working directory, or otherwise restricting the execution of /var/www/html/moodle/filter/tex/mimetex.linux, while the current working directory is /var/www/html/moodle/filter/algebra.
You could look at this by visiting /admin/phpinfo.php at your site, and look carefully at the effective values of open_basedir, safe_mode and safe_mode_exec_dir.
You could also check the apache error log or add the following lines to the top of the algebra debug php file, and you might see some extra error messages:
$CFG->debug = 6143 ;
$CFG->debugdisplay= 1 ;
Hope that helps