I m working on my project, where i have 2 images as Img1 and Img2.
As Img1 is the binary image so i have calculated all decimal values.
For Img2 i have taken the pixel values.
For convenience i have taken 10X10 matrix values from the entire image for the below operation.
[row,col] = size(Img1);
m = zeros(row,col);
w = [1 2 4 8; 16 32 64 128; 256 512 1024 2048; 4096 8192 16384 32768];
for i=2:10
for j=2:10
O = double(Img1(i-1:i+2,j-1:j+2));
m(i,j) = sum(sum(O.* w));
end;
end;
[row,col] = size(Img2);
count = row*col;
outMat = zeros(4,4,count);
l=0;
%m = zeros(row,col);delete
O = zeros(1,256);
for i=2:10
for j=2:10
l=l+1;
outMat(:,:,l) = Img2(i-1:i+2,j-1:j+2);
vec = outMat(3,3,:);
vec = vec(:);
end;
end;
Now, for Img2 , i have collected all pixel values, and need to store 2 col.as below.
Col1 col2 from Img2
from Img1
44128 162
54960 150
58320 119
31200 120
48240 180
54960 160
44128 163
51109 90
44128 56
Here, 44128 is repeated 3 times,now adding all correspong mapping values from col2 i.e.
162,163,56 add them all divide by 3(becos occurance of 44128 is 3 times) and same procedure
to be followed for all values.
44128 (162+163+56)/3
54960 (150+160)/2
58320 (119/1)
31200 (120/1)
48240 (180/1)
51109 (90/1)
Here, I want to create an array N of 1D 1X(size of col) which acts as a counter of Img1 decimal
values,repeated values and store the counter values inside N, and then finding mean by dividing corresponding counter values of N to the Img2 pixel values as above.
Please help:-( , how can i write the code further.
Here's a way doing it using sparse.
Accumulate sums and counts:
S = sparse(Img1, ones(size(Img1)), Img2);
N = sparse(Img1, ones(size(Img1)), ones(size(Img2)));
Determine which values actually occur:
ind = find(N)
Extract sums and counts for those values:
S = full(S(ind))
N = full(N(ind))
Compute corresponding means
M = S ./ N
For your example numbers, this gives
ind =
31200
44128
48240
51109
54960
58320
S =
120
381
180
90
310
119
N =
1
3
1
1
2
1
M =
120
127
180
90
155
119
Try this:
totals = sparse(1, Img1, Img2 );
denominators = sparse( 1, Img1, 1);
img1vals = find(totals);
averages = nonzeros(totals) ./ nonzeros(denominators);
[img1vals(:) averages(:)]
Related
i have a quite complicated question here which i am working on. It's extremely difficult to describe in words, so i will try to explain it with an example.
Assume i have a matrix of values:
A =
[31 85 36 71 51]
[12 33 74 39 12]
[67 11 13 14 18]
[35 36 84 33 57]
Now, i want to first find a maximum vector in the first dimension, which is easy:
[max_vector,~] = max(A,[],1);
max_vector=[67,85, 84, 71,57]
Now i want to get a "slimmed" matrix with values around the maxima (periodical indices):
Desired_Matrix =
[12 36 36 33 18]
[67 85 84 71 57]
[35 33 13 39 51]
This is the matrix with the vectors around the maximum values of matrix A. Can someone tell me how to do this without using a double for loop?
Thank you!
% Input.
A = [31 85 36 71 51; 12 33 74 39 12; 67 11 13 14 18; 35 36 84 33 57]
% Dimensions needed.
nRows = size(A, 1);
nCols = size(A, 2);
% Get maxima and corresponding indices in input.
[max_vector, ind] = max(A);
% Get neighbouring indices.
ind = [ind - 1; ind; ind + 1];
% Modulo indices to prevent dimension overflow.
ind = mod(ind, nRows);
% Correct zero indices.
ind(ind == 0) = nRows;
% Calculate correct indices in A.
temp = repmat(0:nRows:nRows*(nCols-1), 3, 1);
ind = ind + temp;
% Output.
B = A(ind)
Since we have max indices per column, but later want to access these elements in the original array A, we need proper linear indices for A. Here, the trick is to add the number of rows multiplied by the column index (starting by 0). The easiest way to understand might be to remove the semicolons, and inspect the intermediate values of ind.
#HansHirse's answer is more efficient, as it does not create an intermediate matrix.
Try this:
[~, ind_max] = max(A,[],1);
A_ext = A([end 1:end 1],:);
ind_lin = bsxfun(#plus, bsxfun(#plus, ind_max, (0:2).'), (0:size(A_ext,2)-1)*size(A_ext,1));
result = reshape(A_ext(ind_lin), 3, []);
For Matlab R2016b or newer, you can simplify the third line:
[~, ind_max] = max(A,[],1);
A_ext = A([end 1:end 1],:);
ind_lin = ind_max + (0:2).' + (0:size(A_ext,2)-1)*size(A_ext,1);
result = reshape(A_ext(ind_lin), 3, []);
Here is another solution. This is similar to HansHirse's answer, with two improvements:
Slightly more elegantly handles the modular indexing
Is more flexible for specifying which neighbours your want
Code:
% Input
A = [31 85 36 71 51;
12 33 74 39 12;
67 11 13 14 18;
35 36 84 33 57];
% Relative rows of neighbours, i.e. this is [-1, 0, 1] for +/- one row
p = -1:1;
% Get A row and column counts for ease
[nr, nc] = size(A);
% Get max indices
[~,idx] = max( A, [], 1 );
% Handle overflowing indices to wrap around rows
% You don't have to redefine "idx", could use this directly in the indexing line
idx = mod( idx + p.' - 1, nr ) + 1;
% Output B. The "+ ... " is to convert to linear indices, as "idx"
% currently just refers to the row number.
B = A(idx + (0:nr:nr*nc-1));
You can use the Image Processing Toolbox to generate the result, though is less efficient than other solutions.
[~,idx] = max(A, [], 1);
d = imdilate( idx == (1:size(A,1) ).', [1;1;1], 'full');
p = padarray(A, 1, 'circular');
Desired_Matrix = reshape(p(d), 3, []);
just for your information, here is the generalized form for the 3D-Case:
A = zeros(3,5,5);
for id = 1: 20
A(:,:,id) = id;
if id == 10
A(:,:,id) = 100;
end
end
% Relative rows of neighbours, i.e. this is [-1, 0, 1] for +/- one row
p = -1:1;
% Get A row and column counts for ease
[nr, nc, nz] = size(A);
% Get max indices
[~,idx] = max( A, [], 3 );
% Handle overflowing indices to wrap around rows
% You don't have to redefine "idx", could use this directly in the indexing line
idx = mod( idx + reshape(p,1,1,3) - 1, nz ) + 1;
% Output B. The "+ ... " is to convert to linear indices, as "idx"
% currently just refers to the row number.
INDICES = ((idx-1) * (nr*nc)+1 )+ reshape(0:1:nc*nr-1,nr,nc);
B = A(INDICES);
I am programming for task that finds the neighbor of a given pixel x in image Dthat can formula as:
The formula shown pixels y which satisfy the distance to pixel x is 1, then they are neighbor of pixel x. This is my matlab code. However, it still takes long time to find. Could you suggest a faster way to do it. Thank you so much
%-- Find the neighborhood of one pixel
% x is pixel coordinate
% nrow, ncol is size of image
function N = find_neighbor(x,nrow,ncol)
i = x(1);
j = x(2);
I1 = i+1;
if (I1 > nrow)
I1 = nrow;
end
I2 = i-1;
if (I2 < 1)
I2 = 1;
end
J1 = j+1;
if (J1 > ncol)
J1 = ncol;
end
J2 = j-1;
if (J2 < 1)
J2 = 1;
end
N = [I1, I2, i, i; j, j, J1, J2];
For example: ncol=128; nrow=128; x =[30;110] then output
N =31 29 30 30; 110 110 111 109]
For calling the function in loop
x=[30 31 32 33; 110 123 122 124]
for i=1:length(x)
N = find_neighbor(x(:,i),nrow,ncol);
end
Here's a vectorized approach using bsxfun:
% define four neighbors as coordinate differences
d = [-1 0 ; 1 0 ; 0 -1 ; 0 1]';
% add to pixel coordinates
N = bsxfun(#plus, x, permute(d, [1 3 2]));
% make one long list for the neighbors of all pixels together
N = reshape(N, 2, []);
% identify out-of-bounds coordinates
ind = (N(1, :) < 1) | (N(1, :) > nrow) | (N(2, :) < 1) | (N(2, :) > ncol);
% and remove those "neighbors"
N(:, ind) = [];
The permute is there to move the "dimension" of four different neighbors into the 3rd array index. This way, using bsxfun, we get the combination of every pair of original pixel coordinates with every pair of relative neighbor coordinates. The out-of-bounds check assumes that nrow belongs to the first coordinate and ncol to the second coordinate.
With
ncol=128;
nrow=128;
x = [30 31 32 33; 110 123 122 124];
the result is
N =
29 30 31 32 31 32 33 34 30 31 32 33 30 31 32 33
110 123 122 124 110 123 122 124 109 122 121 123 111 124 123 125
Different neighbors of different pixels can end up to be the same pixel, so there can be duplicates in the list. If you only want each resulting pixel once, use
% remove duplicates?
N = unique(N', 'rows')';
to get
N =
29 30 30 30 31 31 31 32 32 32 33 33 33 34
110 109 111 123 110 122 124 121 123 124 122 123 125 124
Matlab's performance is horrible when calling small functions many time. The Matlab approach is to do vectorize as much as possible. A vectorized version of your code:
function N = find_neighbor(x,nrow,ncol)
N = [min(x(1,:)+1,nrow), max(x(1,:)-1,1), x(1,:), x(1,:); x(2,:), x(2,:),min(x(2,:)+1,ncol), max(x(2,:)-1,1)];
end
and usage
x=[30 31 32 33; 110 123 122 124]
N = find_neighbor(x,nrow,ncol);
BTW, for pixels on the border , your solution always gives 4 neighbors. This is wrong. the neighbors of (1,1) for examples should be only (2,1) and (1,2), while you add two extra (1,1).
The solution to this is quite simple - delete all neighbors that are outside the image
function N = find_neighbor(x,nrow,ncol)
N = [x(1,:)+1, x(1,:)-1, x(1,:), x(1,:); x(2,:), x(2,:),x(2,:)+1, x(2,:)-1];
N(:,N(1,:)<1 | N(1,:)> nrow | N(2,:)<1 | N(2,:)>ncol)=[];
end
I am currently experimenting with Matlab functions. Basically I am trying to perform a function on each value found in a matrix such as the following simple example:
k = [1:100];
p = [45 60 98 100; 46 65 98 20; 47 65 96 50];
p(find(p)) = getSum(k, find(p), find(p) + 1);
function x = getSum(k, f, g, h)
x = sum(k(f:g));
end
Why the corresponding output matrix values are all 3, in other words why all indices are depending on the first calculated sum?
The output is the following:
p =
3 3 3 3
3 3 3 3
3 3 3 3
f:g returns the value between f(1,1) and g(1,1), so 1:2.
find(p) returns the indices of non zero values. Since all values are non-zero, you get all indices.
So if we break down the statement p(find(p)) = getSum(k, find(p), fin(p) + 1)
We get
find(p) = 1:12
We then get
f = 1:12 and g = 2:13 which lead to k = 1:2 (as explained above)
finally sum(1:2) = 3
And this value is apply over p(1:12), which is the same as p(:,:) (all the matrix)
I want to create a vector in Matlab with two step sizes that will alternate.
vector =
0 50 51 101 102 152 etc.
So the step size is 50 and 1 which will alternate. How to write a script that will create this vector?
Code
N = 6; %// Number of elements needed in the final output
sz1 = 50; %// Stepsize - 1
sz2 = 4; %// Stepsize - 2
startval = 8; %// First element of the output
vector = reshape(bsxfun(#plus,[startval startval+sz1]',[0:N/2-1]*(sz1+sz2)),1,[])
Output
vector =
8 58 62 112 116 166
Note: For your problem, you need to use sz2 = 1 and startval = 0 instead.
Explanation
Internally it creates two matrices which when "flattened-out" to form vectors would resemble the two vectors that you have pointed out in the comments. You can get those two matrices with the following two sets of conditions.
Set #1: If you keep N = 6, sz1 = 50, sz2 = 0 and startval = 0 -
bsxfun(#plus,[startval startval+sz1]',[0:N/2-1]*(sz1+sz2))
gives us -
0 50 100
50 100 150
Set #2: If you keep N = 6, sz1 = 0, sz2 = 1 and startval = 0 -
bsxfun(#plus,[startval startval+sz1]',[0:N/2-1]*(sz1+sz2))
gives us -
0 1 2
0 1 2
Good thing about bsxfun is that these two matrices can be summed internally to give the final output -
0 51 102
50 101 152
Since, you needed the output as a vector, we need to flatten it out using reshape -
reshape(...,1,[])
giving us -
0 50 51 101 102 152
Thus, we have the final code that was listed earlier.
Here are some ideas I've been playing around with:
Initialization (comparable to Divakar's answer):
N = 6; %// Number of pairs in the final output
firstStep = 50;
secndStep = 1;
startVal = 8; %// First element of the output
And then:
%// Idea 1:
V1 = [startVal cumsum(repmat([firstStep,secndStep],[1,N])) + startVal];
%// Idea 2:
trimVec = #(vec)vec(1:end-1);
V2 = trimVec(circshift(kron((startVal:firstStep:startVal + ...
N*firstStep),[1,1]),[0,-1]) + kron((0:N),[1,1]));
Note that both of these vectors result in length = 2*N + 1.
The thing I'd like to point out is that if you create your vector of differences (e.g. [1 50 1 50 ...]), cumsum() really does the trick from there (you can also have more than 2 step sizes if you choose).
Let the input data be
step1 = 50;
step2 = 1;
start = 0;
number = 9; %// should be an odd number
Then:
n = (number-1)/2;
vector = cumsum([start reshape(([repmat(step1,1,n); repmat(step2,1,n)]),1,[])]);
The result in this example is
vector =
0 50 51 101 102 152 153 203 204
I have an NxM matrix in MATLAB that I would like to reorder in similar fashion to the way JPEG reorders its subblock pixels:
(image from Wikipedia)
I would like the algorithm to be generic such that I can pass in a 2D matrix with any dimensions. I am a C++ programmer by trade and am very tempted to write an old school loop to accomplish this, but I suspect there is a better way to do it in MATLAB.
I'd be rather want an algorithm that worked on an NxN matrix and go from there.
Example:
1 2 3
4 5 6 --> 1 2 4 7 5 3 6 8 9
7 8 9
Consider the code:
M = randi(100, [3 4]); %# input matrix
ind = reshape(1:numel(M), size(M)); %# indices of elements
ind = fliplr( spdiags( fliplr(ind) ) ); %# get the anti-diagonals
ind(:,1:2:end) = flipud( ind(:,1:2:end) ); %# reverse order of odd columns
ind(ind==0) = []; %# keep non-zero indices
M(ind) %# get elements in zigzag order
An example with a 4x4 matrix:
» M
M =
17 35 26 96
12 59 51 55
50 23 70 14
96 76 90 15
» M(ind)
ans =
17 35 12 50 59 26 96 51 23 96 76 70 55 14 90 15
and an example with a non-square matrix:
M =
69 9 16 100
75 23 83 8
46 92 54 45
ans =
69 9 75 46 23 16 100 83 92 54 8 45
This approach is pretty fast:
X = randn(500,2000); %// example input matrix
[r, c] = size(X);
M = bsxfun(#plus, (1:r).', 0:c-1);
M = M + bsxfun(#times, (1:r).'/(r+c), (-1).^M);
[~, ind] = sort(M(:));
y = X(ind).'; %'// output row vector
Benchmarking
The following code compares running time with that of Amro's excellent answer, using timeit. It tests different combinations of matrix size (number of entries) and matrix shape (number of rows to number of columns ratio).
%// Amro's approach
function y = zigzag_Amro(M)
ind = reshape(1:numel(M), size(M));
ind = fliplr( spdiags( fliplr(ind) ) );
ind(:,1:2:end) = flipud( ind(:,1:2:end) );
ind(ind==0) = [];
y = M(ind);
%// Luis' approach
function y = zigzag_Luis(X)
[r, c] = size(X);
M = bsxfun(#plus, (1:r).', 0:c-1);
M = M + bsxfun(#times, (1:r).'/(r+c), (-1).^M);
[~, ind] = sort(M(:));
y = X(ind).';
%// Benchmarking code:
S = [10 30 100 300 1000 3000]; %// reference to generate matrix size
f = [1 1]; %// number of cols is S*f(1); number of rows is S*f(2)
%// f = [0.5 2]; %// plotted with '--'
%// f = [2 0.5]; %// plotted with ':'
t_Amro = NaN(size(S));
t_Luis = NaN(size(S));
for n = 1:numel(S)
X = rand(f(1)*S(n), f(2)*S(n));
f_Amro = #() zigzag_Amro(X);
f_Luis = #() zigzag_Luis(X);
t_Amro(n) = timeit(f_Amro);
t_Luis(n) = timeit(f_Luis);
end
loglog(S.^2*prod(f), t_Amro, '.b-');
hold on
loglog(S.^2*prod(f), t_Luis, '.r-');
xlabel('number of matrix entries')
ylabel('time')
The figure below has been obtained with Matlab R2014b on Windows 7 64 bits. Results in R2010b are very similar. It is seen that the new approach reduces running time by a factor between 2.5 (for small matrices) and 1.4 (for large matrices). Results are seen to be almost insensitive to matrix shape, given a total number of entries.
Here's a non-loop solution zig_zag.m. It looks ugly but it works!:
function [M,index] = zig_zag(M)
[r,c] = size(M);
checker = rem(hankel(1:r,r-1+(1:c)),2);
[rEven,cEven] = find(checker);
[cOdd,rOdd] = find(~checker.'); %'#
rTotal = [rEven; rOdd];
cTotal = [cEven; cOdd];
[junk,sortIndex] = sort(rTotal+cTotal);
rSort = rTotal(sortIndex);
cSort = cTotal(sortIndex);
index = sub2ind([r c],rSort,cSort);
M = M(index);
end
And a test matrix:
>> M = [magic(4) zeros(4,1)];
M =
16 2 3 13 0
5 11 10 8 0
9 7 6 12 0
4 14 15 1 0
>> newM = zig_zag(M) %# Zig-zag sampled elements
newM =
16
2
5
9
11
3
13
10
7
4
14
6
8
0
0
12
15
1
0
0
Here's a way how to do this. Basically, your array is a hankel matrix plus vectors of 1:m, where m is the number of elements in each diagonal. Maybe someone else has a neat idea on how to create the diagonal arrays that have to be added to the flipped hankel array without a loop.
I think this should be generalizeable to a non-square array.
% for a 3x3 array
n=3;
numElementsPerDiagonal = [1:n,n-1:-1:1];
hadaRC = cumsum([0,numElementsPerDiagonal(1:end-1)]);
array2add = fliplr(hankel(hadaRC(1:n),hadaRC(end-n+1:n)));
% loop through the hankel array and add numbers counting either up or down
% if they are even or odd
for d = 1:(2*n-1)
if floor(d/2)==d/2
% even, count down
array2add = array2add + diag(1:numElementsPerDiagonal(d),d-n);
else
% odd, count up
array2add = array2add + diag(numElementsPerDiagonal(d):-1:1,d-n);
end
end
% now flip to get the result
indexMatrix = fliplr(array2add)
result =
1 2 6
3 5 7
4 8 9
Afterward, you just call reshape(image(indexMatrix),[],1) to get the vector of reordered elements.
EDIT
Ok, from your comment it looks like you need to use sort like Marc suggested.
indexMatrixT = indexMatrix'; % ' SO formatting
[dummy,sortedIdx] = sort(indexMatrixT(:));
sortedIdx =
1 2 4 7 5 3 6 8 9
Note that you'd need to transpose your input matrix first before you index, because Matlab counts first down, then right.
Assuming X to be the input 2D matrix and that is square or landscape-shaped, this seems to be pretty efficient -
[m,n] = size(X);
nlim = m*n;
n = n+mod(n-m,2);
mask = bsxfun(#le,[1:m]',[n:-1:1]);
start_vec = m:m-1:m*(m-1)+1;
a = bsxfun(#plus,start_vec',[0:n-1]*m);
offset_startcol = 2- mod(m+1,2);
[~,idx] = min(mask,[],1);
idx = idx - 1;
idx(idx==0) = m;
end_ind = a([0:n-1]*m + idx);
offsets = a(1,offset_startcol:2:end) + end_ind(offset_startcol:2:end);
a(:,offset_startcol:2:end) = bsxfun(#minus,offsets,a(:,offset_startcol:2:end));
out = a(mask);
out2 = m*n+1 - out(end:-1:1+m*(n-m+1));
result = X([out2 ; out(out<=nlim)]);
Quick runtime tests against Luis's approach -
Datasize: 500 x 2000
------------------------------------- With Proposed Approach
Elapsed time is 0.037145 seconds.
------------------------------------- With Luis Approach
Elapsed time is 0.045900 seconds.
Datasize: 5000 x 20000
------------------------------------- With Proposed Approach
Elapsed time is 3.947325 seconds.
------------------------------------- With Luis Approach
Elapsed time is 6.370463 seconds.
Let's assume for a moment that you have a 2-D matrix that's the same size as your image specifying the correct index. Call this array idx; then the matlab commands to reorder your image would be
[~,I] = sort (idx(:)); %sort the 1D indices of the image into ascending order according to idx
reorderedim = im(I);
I don't see an obvious solution to generate idx without using for loops or recursion, but I'll think some more.