I'm trying to write a MATLAB function that processes a file and writes a report on that file. The report will contain numbers, strings, tables, and images.
After looking at MATLAB's documentation, I can only find functions that save individual items to a file. For example, print saves a plot, write saves a table, etc. How do I create a single file that contains many of these items (e.g. a PDF with images, tables, and text)?
You can use print with the -append option to write multiple pages to a PostScript file in sequence, and then convert the ps to pdf. Using Matlab's handle graphics system, it is possible (if tedious) to design each print page in detail, arrange elements, etc.
However, if your document is going to be really complex, I think it would be better to generate the pdf in another way. One approach would be to write LaTeX code using lots of fprintfs and compile the file using pdflatex.
Btw., I'm not aware of a Matlab function write that generates a pdf.
Related
The complete output text file is hundreds of lines long, with relevant nuclear cross sections and a plethora of other data that I do not need for this particular problem. I am trying to extract the columns of data under "BURNUP" and the first "K-INF" from the file I attached. I am trying to extract this data and place it into a separate file. I am a newbie, and have a similar perl script from a professor. I have tried to adapt it to the information I am looking for but the only result I am receiving are the 2 print statements. Any suggestions?
I am getting zero values while using xlsread command in MATLAB.I am using a real world dataset taken from UCI repository which has got both integer and float values.
[Train,textData,rawData] = `xlsread('C:\Users\pooja\Documents\project\breastcancer.csv');`
I have tried with xls format too..
[Train,textData,rawData] = xlsread('C:\Users\pooja\Documents\project\breastcancer.xls');
Thanx in Advance..!
In the wide world of computers, there are a lot of data formats. You need to remember that data formats are different from each other. Generally software like Matlab allows you to open different types of data formats. Each one of course with its own function.
You can guess that the function xmlread is to read XML files. If you want to read csv files or any other type of file in the world, please (I think this is obvious) do not use xmlread!
Specifically to open csv files matlab has csvread. Please, do not use csv read to open files that are not CSV.....
there are datasets in .mat format in the this site: http://www.cs.nyu.edu/~roweis/data.html
I want to change the format to .csv.
Can someone tell me how to change the format to create the .csv file.
Thanks!
Suppose that the .mat files from the site are available already. In the command window in Matlab, you may write, for example:
load('C:\Users\YourUserName\Downloads\mnist_all.mat');
to load the .mat file; the result should be a set of matrices test0, test1, ..., train0, train1 ... created in your workspace, which you want saved as CSV files. Because they're different size, you need to save one CSV per variable, e.g. (also in the command window):
csvwrite('C:\Users\YourUserName\Downloads\mnist_test0.csv', test0);
Repeat the command for each variable, and do not forget to change also the name of the output file to avoid overwriting.
Did you tried the csvwrite function in Matlab?
Just load your .mat files with the load function and then write them with csvwrite!
I do not have a Matlab license so I installed GNU Octave 4.2.1 (2017) on Windows 10 (thank you to John W. Eaton and others). I was not fully successful using the csvwrite so I used the following workaround. (BTW, I am totally incompetent in the Octave world. csvwrite worked for simple data structures).
In the Command Window I used the following two commands
load myfile.mat
save("-text","myfile.txt","variablename")
When the "myfile.mat" is loaded, the variable names for the data vectors loaded are displayed in the workspace window. This is the name(s) to use in the save command. Some .mat files will load several data structures.
The "-text" option is the default, so you may not need to include this option in the command.
The output file lists the .mat file contents in text format as single column (of potentially sequential variables). It should be easy to use you text editor to massage this data into the original matrix structure for use in whatever app you are comfortable with.
Had a similar issue. Needed to convert a series of .mat files that had two columns of numerical data into standard data files (ascii text). Note that I don't really ever use csv, but everything here could be adapted by using csvwrite instead of the standard save.
Using Octave 4.2.1 ....
load myfile.mat
LI = [L, I] ## L and I are column vectors representing my data
save myfile.txt LI
Note that L and I appear to be default variable names chosen by Octave for the two columns vectors in my original data file. Ideally a script that iterated over all files with the .mat extension in my directory would be ideal, but this got the job done. It saves the data as two space separated columns of data.
*** Update
The following script works on Octave 4.2.1 for a series of data files with the .mat extension that are in the same directory. It will iterate over them and write the data out to text files with the same name but with the extension .dat . Note that this is not efficient, so if you have a lot of files or if they are large it can take a while to run. I would suggest that you run it from the command line using octave mat2dat.m so you can actually watch it go.
I make no guarantees that this will work for you, but it did for me. I also am NOT proficient in Octave or Matlab, so I'm sure a better solution exists.
# mat2dat.m
dirlist = glob("*.mat")
for i=1:length(dirlist)
filename = dirlist{i,1}
load(filename, "L", "I")
LI = [L,I]
tmpname = filename(1:length(filename)-3)
txtname = strcat(tmpname, 'dat')
save(txtname, "LI")
end
I am using a MATLAB script to tune the control system on a machine. When the tuning is complete, I would like a report containing text (especially serial number, date/time and the values determined during tuning) and plots, especially transfer functions.
What do to you recommend?
Whatever solution I use should be compatible with the MATLAB compiler so I can distribute my solution to a team of field engineers.
Ideally the report will be a PDF document.
The MATLAB report generator does not seem to be the right product as it appears that I have to break up my script into little pieces and embed them in the report template. My script contains opportunities for the user to intervene and change values or reject the tune if plots don't look right and my hunch is that this will be difficult if the code runs from the report generator. Also, I fear code structure and maintainability will be lost if the code structure is determined by the requirements of the report template.
Please comment if my assumptions are wrong.
UPDATE
I have now switched to use the MATLAB Report Generator with release r2016b and it is working very well for my compiled code users. Unfortunately it means that colleagues who have a MATLAB licence need to buy the Report Generator too, to use my tools scripted.
As the MATLAB Report Generator's development manager, I am concerned that this question may leave the wrong impression about the Report Generator's capabilities.
For one thing, the Report Generator does not require you to break a script up into little pieces and run them inside a template. You can do this if you choose and in some circumstances, it makes sense, but it is not a requirement. In fact, many Report Generator applications use a MATLAB script or program to interact with a user, generate data in the MATLAB workspace, and as a final step, generate a report from the workspace data.
Moreover, as of the R2014b version, the MATLAB Report Generator comes with a document generation API, called the DOM API, that allows you to embed document generation statements in a MATLAB program. For example, you can programmatically create a document object, add and format text, paragraphs, tables, images, lists, and subdocuments, and output Microsoft Word, HTML, or PDF output, depending on the output type you select. You can even programmatically fill in the blanks in forms that you create, using Word or an HTML editor.
The API runs on Windows, Linux, and Mac platforms and generates Word and HTML output on all three, without the use of Word. On Windows, it uses Word under the hood to produce PDF output from the Word documents that it generates.
The latest release of the MATLAB Report Generator introduces a PowerPoint API with capabilities similar to the DOM API. If you need to include report generation in your MATLAB application, please don't rule out the MATLAB Report Generator based on past impressions. You may be surprised at just how powerful it has become.
I've done this quite a bit. You're right that MATLAB Report Generator is typically not a great solution. #Max suggests the right approach (automating Word through its COM interface), but I'd add a few extra comments and tips, based on my experiences.
Remember that if you're going with this solution, you are depending that your end-users will be running Windows, and have a copy of Office on their machine. If you want to ultimately produce a PDF report, that will need to be Office 2010 or above.
I would bet that you'll find it easier to automate the report generation in Excel rather than Word. Given that you're producing a report from MATLAB, you'll likely be wanting quite a lot of things in tables of numbers, which are easier to lay out in Excel.
If you are going to do it in Word, the easiest way is to first (without MATLAB) create a template .doc/.docx file, which contains any generic text that will be the same for all reports and blank tables for any information. Turn on track changes, and insert empty comments at each point that you will be filling in information. Then within your report creation routine in MATLAB, connect to Word and iterate through each comment, replacing it with whatever data you wish.
If you are learning to automate Excel from MATLAB, this page from the Excel Interop documentation is really helpful. There's an equivalent one for Word.
Unlike #Max, I've never had good results by saving figures to an .emf file and then inserting them. In theory that does preserve editability, but I've never found that valuable. Instead, get the figure looking right (and the right size) in MATLAB, then copy it to the clipboard with print(figHandle, 'dbitmap') and paste to Excel with Worksheet.Range('A1').PasteSpecial.
To save as a PDF, use Workbook.ExportAsFixedFormat('xlTypePDF', pathToOutputFile).
Hope that helps!
I think you are right about the report generator.
In my opinion the fastest/easiest approach would be to generate the report in a html document. For that you just need the figures and write a text file, conversion should be trivial.
Quite similar approach would be to create a Latex file. And then create a pdf from it - though for this you'd need to install latex on your deployed machines.
Lastly you could use the good integration of Java in Matlab. There are several libraries you could use - like this. But I wonder if all the complication will be worth it.
Have you considered driving Microsoft Word through its ActiveX interface? I've done this in compiled Matlab programs and it works well. Look at the Matlab help for actxserver(): The object you want to create is of type Word.Application.
Edit to add: To get figures into the document, save them as .emf files using the -dmeta argument to print(), then add them to the document like this:
WordServer.Selection.InlineShapes.AddPicture(fileName);
An iPhone app which I am creating generates reports from a Core Data database as a CSV file, which can then be emailed so that the user may use that data elsewhere outside of the app. I would also like to offer the ability to generate the same reports as a PDF file (of course, with nicer formatting) allowing the user to immediately print the report rather than having to jump through several hoops as with the CSV file - i.e. open in another application (e.g. Excel, Numbers) then reformat the columns (so they are wide enough for printing), bold the headings, etc.
Essentially, I want to provide the PDF file so that the user is immediately given a nicely formatted report, and they only need to export the CSV file if they wish to do data manipulation and need a format which is editable.
I was thinking that the easiest method would be taking the CSV file and the converting this into a PDF file, which would be the same as the CSV except would incorporate nicer formatting (such as a tabular layout) rather than the simple comma-separated format of the CSV file. I have been unable to find any ready-made classes for this purpose (to avoid reinventing the wheel) and I am unsure how to approach this since I have limited experience with this aspect of the SDK. Any suggestions or pointers in the right direction would be much appreciated.
You have two different problems:
Read CSV data into some structure in memory
Turn some structure in memory into a PDF
Aaron Saunders has posted some links for step 2, so here's a link for step 1:
http://github.com/davedelong/CHCSVParser
That's a CSV parser I wrote that will turn your CSV file into an NSArray of NSArrays of NSStrings.