Profiling MATLAB mex CUDA applications with the NVIDIA visual profiler - matlab

I am trying to profile a CUDA code that is embedded in a mex file, called from MATLAB. Running on a win7 x64 machine, MATLAB r2014b
The code is structured as follows:
MATLAB test.m
->contains some standard code generating variables (and calling 1 or 2 minor own MATLAB fucntions)
-> calls testcuda.mex
->contains small, standard, no library C++ code
-> calls either test1.cu or test2.cu
->.cu files end in cudaDeviceReset();
I did the following, as stated in several places on the internet:
Compiled mex files. Test them. They work.
Add exit in the end of test.m.
Launch the NVIDIA Visual Profiler. File -> New Session.
add the full path of the Matlab executable file, for example C:\Program Files\MATLAB\R2014b\bin\matlab.exe
Working directory: add the full path of the Matlab .m file. C:\CUDA_MATLABtests\MyToolbox
Arguments: -nojvm -nosplash -r test
However, when I run the profiler,I get
======== Warning: No CUDA application was profiled, exiting
And nothing more.
I am missing some instruction?
Is there any particular code structure that would make the profiler not to profile?

A Matlab installation comes with two binaries, a launcher in <matlabroot>\bin and the main application in <matlabroot>\bin\<arch>. The later is the executable which also executes the mex functions in it's address space.
When a debugging tool needs to start the application directly, you have to start the one in <matlabroot>\bin\<arch>.
When a debugging tool automatically attaches to child processes as well, it is typically sufficient to start the binary in <matlabroot>\bin setting the -wait parameter. Seeing the launcher application terminating, debugging tools often stop.
Never use the binary in <matlabroot>\bin\<arch> directly unless you have to.

Related

Error running the rsim executable (Simulink Coder)

I have a simulink model (2016b with MC 2013 C/C++ and Mingw-64 compilers) that I'd like to generate a standalone executable for windows-64 bit.
I was able to run the grt executable but due to the fact that I need to read a mat file runtime as opposed to compile time, I am using rsim code generation for this purpose, however the executable that gets generated appears to need quite a bit of .dll, I provided the dll it was asking for however, the application still unable to run. This is the error that results
The application was unable to start correctly 0xc000007b. Click OK to
close the application
What am I missing ?
Your main program is compiled for x64 (64-bit) target, but the dll you provided is compiled for x86 (32-bit) target. Or vice versa.
If it is Mingw-64 stuff, you should be able to obtain all (or most) of them by using the official online installer. Link is here.

mcc producing an unresponsive executable

I am trying to compile a Matlab function using the mcc function. My function writes a line of text to a file.
function hello()
ofid = fopen('hello.txt','w');
fprintf(ofid, 'Hello there, this is matlab.\n');
fclose(ofid);
end
It runs as expected when called from the Matlab console. However, when I compile the file to an executable using mcc
/opt/matlab/matlab2008a/bin/mcc -m hello.m
and run it as
./hello
It seems to run forever and produces no hello.txt file. Both the executable as well as the Matlab function files are in the Matlab working directory.
I am unable to see what can be possibly wrong in my use of mcc. Please help.
Typically, you need to setup the MATLAB runtime environment when executing mcc compiled applications.
You'll probably get more mileage the first time by using deploytool (from the command line) to compile your hello.m program here. MATLAB's application builder will produce a run_hello.sh file that you can peruse through to see how they setup their libraries. Then, to execute your program you would actually call it like this:
./run_hello.sh /Applications/MATLAB/MATLAB_Runtime/v90/
Note: I have just included a generic location for the MATLAB runtime environment, but the actual location will vary depending on your platform and version of MATLAB you built the application with.

Using System function in Matlab is not working

I encountered a very strange problem when using the SYSTEM function to call an executable file from Matlab.
First, I can run the executable file in a window console with no problem. However, when I call system(foo.exe) in Matlab, it does nothing but return the status value -1.0737e+09, and it does not throw any warnings or errors.
I am using Matlab R2009b on a 32-bit windows system and the executable file depends on OpenCV2.40.
The system path variable definitely include all the required lib directories. I also tried adding the relevant paths in the LD_LIBRARY_PATH, and copying the dlls in the working directory. These attempts do not change anything.
I also tried calling SYSTEM('cmd') from Matlab, and running the executable in the invoked window console. It gave me no response, either. It seems like the running environment of the console called from Matlab is different from the original window console.
Running the same code on a different machine in Matlab is successful.
I had this exact same problem. It turned out I simply needed to restart Matlab. I had not restarted Matlab after installing OpenCV2.1.

Mex cannot find a file, but "which" can

I am trying to compile a C++ function (found here). I downloaded the requisite packages, installed Microsoft Windows SDK 7.1, linked it to MATLAB using mex -setup, and then unzipped the function packages into my MATLAB path.
When I run the command:
mex -output Faddeeva_w -O Faddeeva_w_mex.cc Faddeeva.cc
I get the error message:
C:\PROGRA~1\MATLAB\R2013A\BIN\MEX.PL: Error: 'Faddeeva_w_mex.cc' not found.
But if I type which Faddeeva_w_mex.cc I get:
C:\Users\craigim\Documents\Code\Matlab\Faddeeva-MATLAB\Faddeeva_w_mex.cc
So MATLAB and the which command have no problems finding the file, but mex is lost. This is my very first attempt at compiling something with mex, so I'm really not sure where to start here. Does mex have a different path variable that I have to set?
I'm using MATLAB 2013a on a Windows 7 64bit machine with the version of SDK 7.1 that was linked from the MATLAB List of supported compilers.
Either cd into the directory containing the files (assuming they both in the same place), or specify full/relative path to the C++ files when invoking mex function
Try putting addpath('C:\Users\craigim\Documents\Code\Matlab\Faddeeva-MATLAB\'); in your m-file. The path that MATLAB uses seems to be internal and independent of whatever your OS is using.
Documentation on addpath here.
And a similar discussion here.
You may also have to set your PATH environment variable to the string returned by the command fullfile(matlabroot,'bin',computer('arch')) in MATLAB. Here are some instructions on setting environment variables for Windows and Mac or Linux
There is also a pretty good overview of building mex-files here although I get the impression that the basics are not going to answer your question.

Runtime error for MCC compiled program using parfor

I have problems running a program compiled with MCC that uses parfor. The non-compiled .m version works (no bug). When I run the compiled version, I get
"distcomp.remoteparfor" is undefined. I believe I exactly have the error described in
the following link.
http://www.mathworks.com/support/solutions/en/data/1-PAHWE/index.html?product=CO&solution=1-PAHWE
However, since MCR is not installed on my machine (got Matlab and MCC),
I am wondering what the pathes $APPNAME_mcr/java/jar/toolbox and
$MCR/MATLAB Component Runtime/v70/java/jar/toolbox correspond to. I found
the distcomp.jar file in C:\Program Files\MATLAB\R2011b\java\jar\toolbox, but I don't know where to put it since see any path corresponding to $MCR/MATLAB Component Runtime/v70/java/jar/toolbox since MCR is not installed.
Thanks a lot!
Fred
No need to install the MCR if you are simply trying to run the application on the same machine that has MATLAB. The question to ask is, HOW are you launching the compiled application? From a DOS command window? From within MATLAB using the SYSTEM command?
If you are launching the application from a DOS / UNIX command line, then the important thing to keep in mind is that the MATLAB binaries need to be on your system path i.e. just make sure:
$MATLABROOT\bin\$ARCH
is on your system path. Where $MATLABROOT is the matlab installation folder, and $ARCH is your system architecture. For example:
c:\work\matlab\bin\win64
on my machine since my installation folder which contains MATLAB is:
c:\work
and i am on a win64 machine.
The problem is solved. The solution is to make the program
a function instead of a script :
http://www.mathworks.com/matlabcentral/answers/22825-parfor-errors-when-file-is-compiled