Using Kafka for Data Integration with Updates & Deletes - apache-kafka

So a little background - we have a large number of data sources ranging from RDBMS's to S3 files. We would like to synchronize and integrate this data with other various data warehouses, databases, etc.
At first, this seemed like the canonical model for Kafka. We would like to stream the data changes through Kafka to the data output sources. In our test case we are capturing the changes with Oracle Golden Gate and successfully pushing the changes to a Kafka queue. However, pushing these changes through to the data output source has proven challenging.
I realize that this would work very well if we were just adding new data to the Kafka topics and queues. We could cache the changes and write the changes to the various data output sources. However this is not the case. We will be updating, deleting, modifying partitions, etc. The logic for handling this seems to be much more complicated.
We tried using staging tables and joins to update/delete the data but I feel that would become quite unwieldy quickly.
This comes to my question - are there any different approaches we could go about handling these operations? Or should we totally move in a different direction?
Any suggestions/help is much appreciated. Thank you!

There are 3 approaches you can take:
Full dump load
Incremental dump load
Binlog replication
Full dump load
Periodically, dump your RDBMS data source table into a file, and load that into the datawarehouse, replacing the previous version. This approach is mostly useful for small tables, but is very simple to implement, and supports updates and deletes to the data easily.
Incremental dump load
Periodically, get the records that changed since your last query, and send them to be loaded to the data warehouse. Something along the lines of
SELECT *
FROM my_table
WHERE last_update > #{last_import}
This approach is slightly more complex to implement, because you have to maintain the state ("last_import" in the snippet above), and it does not support deletes. It can be extended to support deletes, but that makes it more complicated. Another disadvantage of this approach that it requires your tables to have a last_update column.
Binlog replication
Write a program that continuously listens to the binlog of your RDBMS and sends these updates to be loaded to an intermediate table in the data warehouse, containing the updated values of the row, and whether it is a delete operation or update/create. Then write a query that periodically consolidates these updates to create a table that mirrors the original table. The idea behind this consolidation process is to select, for each id, the last (most advanced) version as seen in all the updates, or in the previous version of the consolidated table.
This approach is slightly more complex to implement, but allows achieving high performance even on large tables and supports updates and deletes.
Kafka is relevant to this approach in that it can be used as a pipeline for the row updates between the binlog listener and the loading to the data warehouse intermediate table.
You can read more about these different replication approaches in this blog post.
Disclosure: I work in Alooma (a co-worker wrote the blog post linked above, and we provide data-pipelines as a service, solving problems like this).

Related

Is it possible to configure Hibernate for flush only but never commit ( A kind of commit simulation)

I need to migrate from an old postgreSql database with an old schema (58 tables) to a new database with a new schema (40 tables). The patterns are completely different.
It is not a simple migration (copy and paste). But rather a copy-transform-paste.
I decided to write a batch and use spring batch, spring data and jpa. So I have two dataSources and a chainedTransaction. My config spring is mainly made up of chunck Task with a JpaPagingItemReader and an ItemWriterAdapter.
For performance needs, I also configured Partitioner which allows me to partition my source tables into several sub-tables and a chunckSize = 500000
Everything works smoothly. But considering the size of my old table it takes me a week to migrate all the data.
I will want to do a test which will consist of running my Batch without committing. Just that hibernate generates all sql requests in a ".sql" file, but does not commit the data to the database.
This will allow me to see if the commit is costly in execution time.
Is it possible to configure hibernate to flush only but never commit? A kind of commit simulation ?
Thank's
Usually, the costly part is foreign key and unique key checks as well as index maintenance, but since you don't write how you fetch data, it could very well be the case that you are accessing your data in an inefficient manner.
In general, I would recommend you to create a dump with pg_dump, restore that and then try to do the migration in an SQL only way. This way, no data has to flow around but can stay on the machine which is generally much more efficient.

How to de-normalize data in Kafka?

I have a MySQL database with ~20 tables. The data is normalized.
Considering this example:
book -> book_authors <- authors
we try to stream the books info eg.:
{book_id:3, title='Red', authors:[{id:3, name:'Mary'}, {id:4, name:'John'}]}
An instance when we see a serious problem: if an author's name change, we have to re-generate all their books.
I'm using Debezium to post the change log for each table in Kafka.
I am unable to find an elegant solution for data denormalization, eg. for adding it to ElasticSearch, MongoDb etc.
I identified two solutions, but both seem to fail:
De-normalize data into a new MySQL table, at source, and use Debezium to stream only this new table. This might be not possible and we have to invest a lot of effort in changing the code of the source system.
Join the streams in Kafka, though, I didn't manage to make it work. It seems that Kafka does not allow joining on a non-primary-key field. This seems a common situation with N-to-N relations.
Did anyone find a solution to data denormalization and publish data into a Kafka stream? This seems to be a common problem and I couldn't find any solution yet.
Try publishing the changes from Debezium to the topics book, book_authors and authors in its raw form, which creates three disjoint streams.
Create a simple consumer application that subscribes to all three topics. Upon receiving a message on either topic, it queries the database to obtain the latest snapshot of the referenced entities, merges the data together, and publishes the denormalised version onto a new merged_book_authors topic. Downstream consumers can read directly from the merged topic.
A minor variation of the above: rather than querying the database for each Debezium change, which may be slow, build a materialised view using a fast key-value or document store such as Redis. This is a little more work, but will (1) improve the throughput of the overall pipeline and (2) take the load off the system-of-record database.

An alternative design to insert/update of talend

I have a requirement in Talend where in I have to update/insert rows from the source table to the destination table. The source and destination tables are identical. The source gets refreshed by a business process and need to update/insert these results in the destination table.
I had designed for the 'insert or update' in tmap and tmysqloutput. However, the job turns out to be super slow
As an alternative to the above solution I am trying to do design the insert and update separately.In order to do this, I was wanting to hash the source rows as the number of rows would be usually less.
So, my question I will hash the input rows but when I join them with the destination rows in tmap should I hash the destination rows as well? Or should I use the destination rows as it is and then join them?
Any suggestions on the job design here?
Thanks
Rathi
If you are using the same database, you should not use ETL loading techniques but ELT loading so that all processing will happen in the database. Talend offers a few ELT components which are a bit different to use but very helpful for this case. I've had things to speed up by multiple magnitudes using only those components.
It is still a good idea to use an indexed hashed field both in the source and the target, which is done in a same way in loading Satellites in the Data Vault 2.0 model.
Alternatively, if you have direct access to the source table database, you could consider adding triggers for C(R)UD scenarios. Doing this, every action on the source database could be reflected in your database immediately. Remember though that you might need to think about a buffer table ("staging") where you could store your changes so that you are able to ingest fast, process later. In this table only the changed rows and the change type (create, update, delete) would be present for you to process. This decouples loading and processing which can be helpful if there will be a problem with loading or processing later on.
Yes i believe that you should use hash component for destination table as well.
Because than your processing (lookup) will be very fast as its happening in memory
If not than lookup load may take more time.

Database Content Versioning

I am interested in keeping a running history of every change which has happened on some tables in my database, thus being able to reconstruct historical states of the database for analysis purposes.
I am using Postgres, and this MVCC thing just seems like I should be able to exploit it for this purpose but I cannot find any documentation to support this. Can I do it? Is there a better way?
Any input is appreciated!
UPD
I have marked Denis' response as the answer, because he did in fact answer whether MVCC is what I want which was the question. However, the strategy I have settled on is detailed below in case anyone finds it useful:
The Postgres feature that does what I want: online backup/point in time recovery.
http://www.postgresql.org/docs/8.1/static/backup-online.html explains how to use this feature but essentially you can set this "write ahead log" to archive mode, take a snapshot of the database (say, before it goes live), then continually archive the WAL. You can then use log replay to recall the state of the database at any time, with the side benefit of having a warm standby if you choose (by continually replaying the new WALs on your standby server).
Perhaps this method is not as elegant as other ways of keeping a history, since you need to actually build the database for every point in time you wish to query, however it looks extremely easy to set up and loses zero information. That means when I have the time to improve my handling of historical data, I'll have everything and will therefore be able to transform my clunky system to a more elegant system.
One key fact that makes this so perfect is that my "valid time" is the same as my "transaction time" for the specific application- if this were not the case I would only be capturing "transaction time".
Before I found out about the WAL, I was considering just taking daily snapshots or something but the large size requirement and data loss involved did not sit well with me.
For a quick way to get up and running without compromising my data retention from the outset, this seems like the perfect solution.
Time Travel
PostgreSQL used to have just this feature, and called it "Time Travel". See the old documentation.
There's somewhat similar functionality in the spi contrib module that you might want to check out.
Composite type audit trigger
What I usually do instead is to use triggers to log changes along with timestamps to archival tables, and query against those. If the table structure isn't going to change you can use something like:
CREATE TABLE sometable_history(
command_tag text not null check (command_tag IN ('INSERT','DELETE','UPDATE','TRUNCATE')),
new_content sometable,
change_time timestamp with time zone
);
and your versioning trigger can just insert into sometable_history(TG_OP,NEW,current_timestamp) (with a different CASE for DELETE, where NEW is not defined).
hstore audit trigger
That gets painful if the schema changes to add new NOT NULL columns though. If you expect to do anything like that consider using a hstore to archive the columns, instead of a composite type. I've already added an implementation of that on the PostgreSQL wiki already.
PITR
If you want to avoid impact on your master database (growing tables, etc), you can alternately use continuous archiving and point-in-time recovery to log WAL files that can, using a recovery.conf, be replayed to any moment in time. Note that WAL files are big and they include not only the tuples you changed, but VACUUM activity and other details. You'll want to run them through clearxlogtail since they can have garbage data on the end if they're partial segments from an archive timeout, then you'll want to compress them heavily for long term storage.
I am using Postgres, and this MVCC thing just seems like I should be able to exploit it for this purpose but I cannot find any documentation to support this. Can I do it?
Not really. There are tools to see dead rows, because auto-vacuuming is so that will eventually be reclaimed.
Is there a better way?
If I get your question right, you're looking into logging slowly changing dimensions.
You might find this recent related thread interesting:
Temporal database design, with a twist (live vs draft rows)
I'm not aware of any tools/products that are built for that purpose.
While this may not be exactly what you're asking for, you can configure Postgresql to log ddl changes. Setting the log_line_prefix parameter (try including %d, %m, and %u) and setting the log_statement parameter to ddl should give you a reasonable history of who made what ddl changes and when.
Having said that, I don't believe logging ddl to be foolproof. For example, consider a situation where:
Multiple schemas have a table with the same name,
one of the tables is altered, and
the ddl doesn't fully qualify the table name (relying on the search path to get it right),
then it may not be possible to know from the log which table was actually altered.
Another option might be to log ddl as above but then have a watcher program perform a pg_dump of the database schema whenever a ddl entry get's logged. You could even compare the new dump with the previous dump and extract just the objects that were changed.

How to prevent Write Ahead Logging on just one table in PostgreSQL?

I am considering log-shipping of Write Ahead Logs (WAL) in PostgreSQL to create a warm-standby database. However I have one table in the database that receives a huge amount of INSERT/DELETEs each day, but which I don't care about protecting the data in it. To reduce the amount of WALs produced I was wondering, is there a way to prevent any activity on one table from being recorded in the WALs?
Ran across this old question, which now has a better answer. Postgres 9.1 introduced "Unlogged Tables", which are tables that don't log their DML changes to WAL. See the docs for more info, but at least now there is a solution for this problem.
See Waiting for 9.1 - UNLOGGED tables by depesz, and the 9.1 docs.
Unfortunately, I don't believe there is. The WAL logging operates on the page level, which is much lower than the table level and doesn't even know which page holds data from which table. In fact, the WAL files don't even know which pages belong to which database.
You might consider moving your high activity table to a completely different instance of PostgreSQL. This seems drastic, but I can't think of another way off the top of my head to avoid having that activity show up in your WAL files.
To offer one option to my own question. There are temp tables - "temporary tables are automatically dropped at the end of a session, or optionally at the end of the current transaction (see ON COMMIT below)" - which I think don't generate WALs. Even so, this might not be ideal as the table creation & design will be have to be in the code.
I'd consider memcached for use-cases like this. You can even spread the load over a bunch of cheap machines too.