Perl log message is unexpected written into dest file - perl

Here is a segment of test code for writing data to files,
open(OUT_FILE, ">", $destfile)||die("can not open file!");
select(OUT_FILE);
binmode(OUT_FILE);
printf "test file name:\t'%s'\n", $destfile;
writebinary(OUT_FILE,pack('H*', $name))
Log message "test file name: datatest.txt" is appended in datatest.txt
What's wrong?

You have selected your file handle OUT_FILE. select will make output from print and printf go to the selected handle instead of STDOUT, which is selected by default.
Remove the call to select. You don't need it.
Please note your code is very old-fashioned. It could be rewritten as follows, to take into account lexical file handles and proper error handling:
open my $fh, '>', $destfile or die "Can't open file '$destfile': $!";
binmode $fh;
printf "test file name:\t'%s'\n", $destfile;
writebinary($fh, pack('H*', $name));
Of course you're not telling us what writebinary does. You might need to make changes there. But keep in mind that glob filehandles are global, and other parts of your program might mess with your OUT_FILE.

Related

Printing a text file using perl

I am completely new to this and this should be the easiest thing to do but for some reason I cannot get my local text file to print. After trying multiple times with different code I came to use the following code but it doesn't print.
I have searched for days on various threads to solve this and have had no luck. Please help. Here is my code:
#!/usr/bin/perl
$newfile = "file.txt";
open (FH, $newfile);
while ($file = <FH>) {
print $file;
}
I updated my code to the following:
#!/user/bin/perl
use strict; # Always use strict
use warnings; # Always use warnings.
open(my $fh, "<", "file.txt") or die "unable to open file.txt: $!";
# Above we open file using 3 handle method
# or die die with error if unable to open it.
while (<$fh>) { # While in the file.
print $_; # Print each line
}
close $fh; # Close the file
system('C:\Users\RSS\file.txt');
It returns the following: my first report generated by perl. I do not know where this is coming from. Nowhere do I have a print "my first report generated by perl."; statement and it definitely is not in my text file.
My text file is full of various emails, addresses, phone numbers and snippets of emails.
Thank you all for your help. I figured out my problem. I somehow managed to kick myself out of my directory and did not realize it.
This is most likely a combination of a failure to open the file, and a failure to check the return value of open.
If you are completely new to perl, I warmly recommend reading the excellent "perlintro" man page, using either man perlintro or perldoc perlintro on the command line, or taking a look here: https://perldoc.perl.org/perlintro.html.
The "Files and I/O" section there gives a good and concise way of doing this:
open(my $in, "<", "input.txt") or die "Can't open input.txt: $!";
while (<$in>) { # assigns each line in turn to $_
print "Just read in this line: $_";
}
This version will give you an explanation and abort if anything goes wrong while trying to open the file. For example, if there is no file named file.txt in the current working directory, your version will quietly fail to open the file, and afterwards it will quietly fail to read from the closed file handle.
Also, always adding at least one of these to your perl scripts will save you a lot of trouble in the long run:
use warnings; # or use the -w command line switch to turn warnings on globally
use diagnostics;
These won't catch the failure to open the file, but will alert on the failed read.
In the first example here you can see that without the diagnostics module, the code fails without any error messages. The second example shows how the diagnostics module changes this.
$ perl -le 'open FH, "nonexistent.txt"; while(<FH>){print "foo"}'
$ perl -le 'use diagnostics; open FH, "nonexistent.txt"; while(<FH>){print "foo"}'
readline() on closed filehandle FH at -e line 1 (#1)
(W closed) The filehandle you're reading from got itself closed sometime
before now. Check your control flow.
By the way, the legendary "Camel Book" is basically the perl man pages formatted for paper printing, so reading the perldocs in the order listed in perldoc perl will give you a high level of understanding of the language in a reasonably accessible and inexpensive manner.
Happy hacking!
This is simple and including explanations.
use strict; # Always use strict
use warnings; # Always use warnings.
open(my $fh, "<", "file.txt") or die "unable to open file.txt: $!";
# Above we open file using 3 handle method
# or die die with error if unable to open it.
while (<$fh>) { # While in the file.
print $_; # Print each line
}
close $fh; # Close the file
There is then also the case where you are trying to open a file which is not in a location where you think it is. So consider doing full path, if not in the same dir.
open(my $fh, "<", 'F:\Workdir\file.txt') or die "unable to open < input.txt: $!";
EDIT: After your comments, it seems that you are opening an empty file. Please add this at the bottom of that same script and rerun. It will open the file in C:\Users\RSS and make sure it does actually contain data?
system('C:\Users\RSS\file.txt');
First, of all as you are starting out, it is better to enable all warnings by 'use warnings' and disable all such expression which can lead to uncertain behavior or are difficult to debug by pragma 'use strict'.
As you are dealing with file stream, it is always recommended to the check if you were able to open the stream. so, try to use croak or die both would terminate the program with a given message.
Instead of reading inside the while condition, I would recommend checking for end of file. So, loop breaks as end is found. Usually, when reading a line you would use it for further processing, so it is good idea to remove end of lines using chomp.
A sample for reading a file in perl can be as follows:
#!/user/bin/perl
use strict;
use warnings;
my $newfile = "file.txt";
open (my $fh, $newfile) or die "Could not open file '$newfile' $!";
while (!eof($fh))
{
my $line=<$fh>;
chomp($line);
print $line , "\n";
}

File truncated, when opened in Perl

Im new to perl, so sorry if this is obvious, but i looked up how to open a file, and use the flags, but for the life of me they dont seem to work right I narrowed it down to these lines of code.
if ($flag eq "T"){
open xFile, ">" , "$lUsername\\$openFile";
}
else
{
open xFile, ">>", "$lUsername\\$openFile";
}
Both of these methods seem to delete the contents of my file. I also checked if the flag is formatted correctly and it is, i know for a fact ive gone down both conditions.
EDIT: codepaste of a larger portion of my code http://codepaste.net/n52sma
New to Perl? I hope you're using use strict and use warnings.
As other's have stated, you should be using a test to make sure your file is open. However, that's not really the problem here. In fact, I used your code, and it seems to work fine for me. Maybe you should try printing some debugging messages to see if this is doing what you think it's doing:
use strict;
use warnings;
use autodie; #Will stop your program if the "open" doesn't work.
my $lUsername = "ABaker";
my $openFile = "somefile.txt";
if ($flag eq "T") {
print qq(DEBUG: Flag = "$flag": Deleting file "$lUsername/$openFile");
open xFile, ">" , "$lUsername/$openFile";
}
else {
print qq(DEBUG: Flag = "$flag": Appending file "$lUsername/$openFile");
open xFile, ">>", "$lUsername/$openFile";
}
You want to use strict and warnings in order to make sure you're not having issues with variable names. The use strict forces you to declare your variables first. For example, are you setting $Flag, but then using $flag? Maybe $flag is set the first time through, but you're setting $Flag the second time through.
Anyway, the DEBUG: statements will give you a better idea of what your error could be.
By the way, in Perl, you're checking if $flag is set to T and not t. If you want to test against both t and T, test whether uc $flag eq 'T' and not just $flag eq 'T'.
#Ukemi
I reformated to comply with use strict, i also made print statements to make sure i was trunctating when i want to, and not when i dont. It still is deleting the file. Although now sometimes its simply not writing, im going to give a larger portion of my code in a link, id really appreciate it if you gave it a once over.
Are you seeing it say Truncating, but the file is empty? Are you sure the file already existed? There's a reason why I put the flag and everything in my debug statements. The more you print, the more you know. Try the following section of code:
$file = "lUsername/$openFile" #Use forward slashes vs. back slashes.
if ($flag eq "T") {
print qq(Flag = "$flag". Truncating file "$file"\n);
open $File , '>', $file
or die qq(Unable to open file "$file" for writing: $!\n);
}
else {
print qq(Flag = "$flag". Appending to file "$file"\n);
if (not -e $file) {
print qq(File "$file" does not exist. Will create it\n");
}
open $File , '>>', $file
or die qq(Unable to open file "$file" for appending: $!\n);
}
Note I'm printing out the flag and the name of the file in quotes. This will allow me to see if there are any hidden characters in my file name.
I'm using the qq(...) method to quote strings, so I can use the quotation marks in my print statements.
Also note I'm checking for the existence of the file when I truncate. This way, I make sure the file actually exists.
This should point out any possible errors in your logic. The other thing you can do is to stop your program when you finish writing out the file and verify that the file was written out as expected.
print "Write to file now:\n";
my $writeToFile = <>;
printf $File "$writeToFile";
close $File;
print "DEBUG: Temporary stop. Examine file\n";
<STDIN>; #DEBUG:
Now, if you see it saying it's appending to the file, and the file exists, and you still see the file being overwritten, we'll know the problem lies in your actual open xFile, ">>" $file statement.
You should use the three-argument-version of open, lexical filehandles and check wether there might have been an error:
# Writing to file (clobbering it if it exists)
open my $file , '>', $filename
or die "Unable to write to file '$filename': $!";
# Appending to file
open my $file , '>>', $filename
or die "Unable to append to file '$filename': $!";
>> does not clobber or truncate. Either you ended up in the "then" clause when you expected to be in the "else" clause, or the problem is elsewhere.
To check what $flag contains:
use Data::Dumper;
local $Data::Dumper::Useqq = 1;
print(Dumper($flag));
For your reference I have mentioned some basic file handling techniques below.
open FILE, "filename.txt" or die $!;
The command above will associate the FILE filehandle with the file filename.txt. You can use the filehandle to read from the file. If the file doesn't exist - or you cannot read it for any other reason - then the script will die with the appropriate error message stored in the $! variable.
open FILEHANDLE, MODE, EXPR
The available modes are the following:
read < #this mode will read the file
write > # this mode will create the new file. If the file already exists it will truncate and overwrite.
append >> #this will append the contents if the file already exists,else it will create new one.
if you have confusion on this, you can use the module called File::Slurp;
I have mentioned the sample codes using File::Slurp module.
use strict;
use File::Slurp;
my $read_mode=read_file("test.txt"); #to read file contents
write_file("test2.txt",$read_mode); #to write file
my #all_files=read_dir("/home/desktop",keep_dot_dot=>0); #read a dir
write_file("test2.txt",{append=>1},"#all_files"); #Append mode

Perl File Handling

The below is the Perl script that I wrote today. This reads the content from one file and writes on the other file. It works but, not completely.
#---------------------------------------------------------------------------
#!/usr/bin/perl
open IFILE, "text3.txt" or die "File not found";
open OFILE, ">text4.txt" or die "File not found";
my $lineno = 0;
while(<IFILE>)
{
#var=<IFILE>;
$lineno++;
print OFILE "#var";
}
close(<IFILE>);
close(<OFILE>);
#---------------------------------------------------------------------------
The issue is, it reads and writes contens, but not all.
text3.txt has four lines. The above script reads only from second line and writes on text4.txt. So, finally I get only three lines (line.no 2 to line.no 4) of text3.txt.
What is wrong with the above program. I don't have any idea about how to check the execution flow on Perl scripts. Kindly help me.
I'm completely new to Programming. I believe, learning all these would help me in changing my career path.
Thanks in Advance,
Vijay
<IFILE> reads one line from IFILE (only one because it's in scalar context). So while(<IFILE>) reads the first line, then the <IFILE> in list context within the while block reads the rest. What you want to do is:
# To read each line one by one:
while(!eof(IFILE)) { # check if end of file is reached instead of reading a line
my $line = <IFILE>; # scalar context, reads only one line
print OFILE $line;
}
# Or to read the whole file at once:
my #content = <IFILE>; # list context, read whole file
print OFILE #content;
The problem is that this line...
while(<IFILE>)
...reads one line from text3.txt, and then this line...
#var=<IFILE>;
...reads ALL of the remaining lines from text3.txt.
You can do it either way, by looping with while or all at once with #var=<IFILE>, but trying to do both won't work.
This is how I would have written the code in your question.
#!/usr/bin/perl
use warnings;
use strict;
use autodie;
# don't need to use "or die ..." when using the autodie module
open my $input, '<', 'text3.txt';
open my $output, '>', 'text4.txt';
while(<$input>){
my $lineno = $.;
print {$output} $_;
}
# both files get closed automatically when they go out of scope
# so no need to close them explicitly
I would recommend always putting use strict and use warnings at the beginning of all Perl files. At least until you know exactly why it is recommended.
I used autodie so that I didn't have to check the return value of open manually. ( autodie was added to Core in version 5.10.1 )
I used the three argument form of open because it is more robust.
It is important to note that while (<$input>){ ... } gets transformed into while (defined($_ = <$input>)){ ... } by the compiler. Which means that the current line is in the $_ variable.
I also used the special $. variable to get the current line number, rather than trying to keep track of the number myself.
There is a couple of questions you might want to think about, if you are strictly copying a file you could use File::Copy module.
If you are going to process the input before writing it out, you might also consider whether you want to keep both files open at the same time or instead read the whole content of the first file (into memory) first, and then write it to the outfile.
This depends on what you are doing underneath. Also if you have a huge binary file, each line in the while-loop might end up huge, so if memory is indeed an issue you might want to use more low-level stream-based reading, more info on I/O: http://oreilly.com/catalog/cookbook/chapter/ch08.html
My suggestion would be to use the cleaner PBP suggested way:
#!/usr/bin/perl
use strict;
use warnings;
use English qw(-no_match_vars);
my $in_file = 'text3.txt';
my $out_file = 'text4.txt';
open my $in_fh, '<', $in_file or die "Unable to open '$in_file': $OS_ERROR";
open my $out_fh, '>', $out_file or die "Unable to open '$out_file': $OS_ERROR";
while (<$in_fh>) {
# $_ is automatically populated with the current line
print { $out_fh } $_ or die "Unable to write to '$out_file': $OS_ERROR";
}
close $in_fh or die "Unable to close '$in_file': $OS_ERROR";
close $out_fh or die "Unable to close '$out_file': $OS_ERROR";
OR just print out the whole in-file directly:
#!/usr/bin/perl
use strict;
use warnings;
use English qw(-no_match_vars);
my $in_file = 'text3.txt';
my $out_file = 'text4.txt';
open my $in_fh, '<', $in_file or die "Unable to open '$in_file': $OS_ERROR";
open my $out_fh, '>', $out_file or die "Unable to open '$out_file': $OS_ERROR";
local $INPUT_RECORD_SEPARATOR; # Slurp mode, read in all content at once, see: perldoc perlvar
print { $out_fh } <$in_fh> or die "Unable to write to '$out_file': $OS_ERROR";;
close $in_fh or die "Unable to close '$in_file': $OS_ERROR";
close $out_fh or die "Unable to close '$out_file': $OS_ERROR";
In addition if you just want to apply a regular expression or similar to a file quickly, you can look into the -i switch of the perl command: perldoc perlrun
perl -p -i.bak -e 's/foo/bar/g' text3.txt; # replace all foo with bar in text3.txt and save original in text3.txt.bak
When you're closing the files, use just
close(IFILE);
close(OFILE);
When you surround a file handle with angle brackets like <IFILE>, Perl interprets that to mean "read a line of text from the file inside the angle brackets". Instead of reading from the file, you want to close the actual file itself here.

Perl open file problem

I am having some trouble trying to print from a file. Any ideas? Thanks
open(STDOUT,">/home/int420_101a05/shttpd/htdocs/receipt.html");
#Results of a sub-routine
&printReceipt;
close(STDOUT);
open(INF,"/home/int420_101a05/shttpd/htdocs/receipt.html"); $emailBody = <INF>;
close(INF);
print $emailBody;
ERRORS: Filehandle STDOUT reopened as INF only for input at ./test.c line 6.
print() on closed filehandle STDOUT at ./test.c line 9.
This discussion addresses the technical reason for the message. Relevant info from the thread is this:
From open(2) manpage:
When the call is successful, the file descriptor returned will be
the lowest file descriptor not currently open for the process.
But STDOUT still refers to the
filehandle #1. This warning could be
useful. Although one can argue that
further uses of STDOUT as an output
filehandle will trigger a warning as
well...
So, to summarize, you closed STDOUT (file descriptor 1) and your file will be open as FD#1. That's due to open()'s properties.
As other have noted, the real reason you're having this problem is that you should not use STDOUT for printing to a file unless there's some special case where it's required.
Instead, open a file for writing using a new file handle:
open(OUTFILE,">/home/int420_101a05/shttpd/htdocs/receipt.html")
|| die "Could not open: $!";
print OUTFILE "data";
close(OUTFILE);
To print to filehandle from subroutine, just pass the file handle as a parameter.
The best way of doing so is to create an IO::File object and pass that object around
my $filehandle = IO::File->new(">$filename") || die "error: $!";
mySub($filehandle);
sub mySub {
my $fh = shift;
print $fh "stuff" || die "could not print $!";
}
You can also set a particular filehandle as a default filehandle to have print print to that by default using select but that is a LOT more fragile and should be avoidded in favor of IO::File solution.
If you want to temporarily change the standard output, use the select builtin. Another option is to localize the typeglob first:
{
local *STDOUT;
open STDOUT, '>', 'outfile.txt' or die $!;
print "Sent to file\n";
}
Don't try to open the STDOUT handle. If you want to print to STDOUT, just use print (with no filehandle argument). If you want to print to something other than STDOUT, use a different name.

How do I resolve a "print() on closed filehandle" error in Perl?

I am getting this error while executing my Perl script. Please, tell me how to rectify this error in Perl.
print() on closed filehandle MYFILE
This is the code that is giving the error:
sub return_error
{
$DATA= "Sorry this page is corrently being updated...<p>";
$DATA.= " Back ";
open(MYFILE,">/home/abc/xrt/sdf/news/top.html");
print MYFILE $DATA;
close(MYFILE);
exit;
}
I hope that now I'm clearer.
You want to do some action on MYFILE after you (or the interpreter itself because of an error) closed it.
According to your code sample, the problem could be that open doesn't really open the file, the script may have no permission to write to the file.
Change your code to the following to see if there was an error:
open(MYFILE, ">", "/home/abc/xrt/sdf/news/top.html") or die "Couldn't open: $!";
Update
ysth pointed out that -w is not really good at checking if you can write to the file, it only ‘checks that one of the relevant flags in the mode is set’. Furthermore, brian d foy told me that the conditional I've used isn't good at handling the error. So I removed the misleading code. Use the code above instead.
It appears that the open call is failing. You should always check the status when opening a filehandle.
my $file = '/home/abc/xrt/sdf/news/top.html';
open(MYFILE, ">$file") or die "Can't write to file '$file' [$!]\n";
print MYFILE $DATA;
close MYFILE;
If the open is unsuccessful, the built-in variable $! (a.k.a. $OS_ERROR) will contain the OS-depededant error message, e.g. "Permission denied"
It's also preferable (for non-archaic versions of Perl) to use the three-argument form of open and lexical filehandles:
my $file = '/home/abc/xrt/sdf/news/top.html';
open(my $fh, '>', $file) or die "Can't write to file '$file' [$!]\n";
print {$fh} $DATA;
close $fh;
An alternate solution to saying or die is to use the autodie pragma:
#!/usr/bin/perl
use strict;
use warnings;
use autodie;
open my $fh, "<", "nsdfkjwefnbwef";
print "should never get here (unless you named files weirdly)\n";
The code above produces the following error (unless a file named nsdfkjwefnbwef exists in the current directory):
Can't open 'nsdfkjwefnbwef' for reading: 'No such file or directory' at example.pl line 7
This:
open(MYFILE,">/home/abc/xrt/sdf/news/top.html");
In modern Perl, it could be written as:
open(my $file_fh, ">", "/home/abc/xrt/sdf/news/top.html") or die($!);
This way you get a $variable restricted to the scope, there is no "funky business" if you have weird filenames (e.g. starting with ">") and error handling (you can replace die with warn or with error handling code).
Once you close $file_fh or simply go out of scope, you can not longer print to it.
I had this problem when my files were set to READ-ONLY.
Check this also, before giving up! :)
Check that the open worked
if(open(my $FH, ">", "filename") || die("error: $!"))
{
print $FH "stuff";
close($FH);
}
If you use a global symbol MYFILE as your filehandle, rather than a local lexical ($myfile), you will invariably run into issues if your program is multithreaded, e.g. if it is running via mod_perl. One process could be closing the filehandle while another process is attempting to write to it. Using $myfile will avoid this issue as each instance will have its own local copy, but you will still run into issues where one process could overwrite the data that another is writing. Use flock() to lock the file while writing to it.
Somewhere in you're script you will be doing something like:
open MYFILE, "> myfile.txt";
# do stuff with myfile
close MYFILE;
print MYFILE "Some more stuff I want to write to myfile";
The last line will throw an error because MYFILE has been closed.
Update
After seeing your code, it looks like the file you are trying to write to can't be opened in the first place. As others have already mentioned try doing something like:
open MYFILE, "> myfile.txt" or die "Can't open myfile.txt: $!\n"
Which should give you some feedback on why you can't open the file.