How to use Structured Spark Streaming in pySpark to insert row into Mongodb? - mongodb

I am trying to Integrate Kafka with Spark-Structured-Streaming in PySpark to MongoDB Sink. I need help on correcting my code if i am going wrong
Got integrated Kafka-PySpark and PySpark-Mongo. Now trying to integrate the pipeline from Kafka-PySpark-Mongo
I'm using pyspark 2.4.5.
This is my code:
spark = SparkSession.builder \
.appName("Spark Structured Streaming from Kafka") \
.getOrCreate()
topic_name = "Be_"
kafka_broker = "localhost:9092"
producer = KafkaProducer(bootstrap_servers = kafka_broker)
jsonschema = StructType([ \
StructField("id", StringType()), StructField("Date", StringType()), \
StructField("Name", StringType()), StructField("Hour", StringType()), \
StructField("Last_Price", FloatType()), StructField("Var%", FloatType()), \
StructField("Last_Value", FloatType()), StructField("TYpe", StringType())])
df = spark.readStream.format("kafka") \
.option("kafka.bootstrap.servers", kafka_broker) \
.option("startingOffsets", "latest") \
.option("subscribe", topic_name) \
.load() \
.selectExpr("CAST(value AS STRING)")
def parse_data_from_kafka_message(sdf, schema):
from pyspark.sql.functions import split
assert sdf.isStreaming == True, "DataFrame doesn't receive streaming data"
col = split(sdf['value'], ',') #split attributes to nested array in one Column
#now expand col to multiple top-level columns
for idx, field in enumerate(schema):
sdf = sdf.withColumn(field.name, col.getItem(idx).cast(field.dataType))
return sdf.select([field.name for field in schema])
df= parse_data_from_kafka_message(df, jsonschema)
df \
.writeStream \
.format("mongo") \
.option("com.mongodb.spark.sql.DefaultSource","mongodb://localhost:27017/DataManagement.Data") \
.outputMode("append") \
.start() \
.awaitTermination()
This is the error that comes out in console:
I get this error from the console:
Py4JJavaError: An error occurred while calling o263.start.
: java.lang.UnsupportedOperationException: Data source mongo does not support streamed writing
I also tried using the ForeachWriter:
class ForeachWriter:
     def open (self, partition_id, epoch_id):
         # Open connection. This method is optional in Python.
         self.connection = MongoClient ('mongodb: // localhost: 27017')
         self.db = self.connection ['DataManagement']
         self.coll = self.db ['Data']
         pass
     def process (self, row):
         # Write row to connection. This method is NOT optional in Python.
         # Self.coll = None
         self.coll.insert_one (row.asDict ())
         pass
     def close (self, error):
         # Close the connection. This method in optional in Python.
         pass
df \
         .writeStream \
         .foreach (ForeachWriter ()) \
         .trigger (processingTime = '3 seconds') \
         .outputMode ("Append") \
         .option ("truncate", "false") \
         .start ()
Unfortunately the mongodb sink doesn't work either way and I'd like to know if there is another way to send data to MongoDB using PySpark or if I'm doing something wrong in the code. Thank you very much

Related

Databricks - Delta Live Table Pipeline - Ingest Kafka Avro using Schema Registry

I'm new to Azure Databricks and I'm trying implement an Azure Databricks Delta Live Table Pipeline that ingests from a Kafka topic containing messages where the values are SchemaRegistry encoded AVRO.
Work done so far...
Exercise to Consume and Write to a Delta Table
Using the example in Confluent Example, I've read the "raw" message via:
rawAvroDf = (
spark
.readStream
.format("kafka")
.option("kafka.bootstrap.servers", confluentBootstrapServers)
.option("kafka.security.protocol", "SASL_SSL")
.option("kafka.sasl.jaas.config", "kafkashaded.org.apache.kafka.common.security.plain.PlainLoginModule required username='{}' password='{}';".format(confluentApiKey, confluentSecret))
.option("kafka.ssl.endpoint.identification.algorithm", "https")
.option("kafka.sasl.mechanism", "PLAIN")
.option("subscribe", confluentTopicName)
.option("startingOffsets", "earliest")
.option("failOnDataLoss", "false")
.load()
.withColumn('key', fn.col("key").cast(StringType()))
.withColumn('fixedValue', fn.expr("substring(value, 6, length(value)-5)"))
.withColumn('valueSchemaId', binary_to_string(fn.expr("substring(value, 2, 4)")))
.select('topic', 'partition', 'offset', 'timestamp', 'timestampType', 'key', 'valueSchemaId','fixedValue')
)
Created a SchemaRegistryClient:
from confluent_kafka.schema_registry import SchemaRegistryClient
import ssl
schema_registry_conf = {
'url': schemaRegistryUrl,
'basic.auth.user.info': '{}:{}'.format(confluentRegistryApiKey, confluentRegistrySecret)}
schema_registry_client = SchemaRegistryClient(schema_registry_conf)
Defined a deserialization function that looks up the schema ID from the start of the binary message:
import pyspark.sql.functions as fn
from pyspark.sql.avro.functions import from_avro
def parseAvroDataWithSchemaId(df, ephoch_id):
cachedDf = df.cache()
fromAvroOptions = {"mode":"FAILFAST"}
def getSchema(id):
return str(schema_registry_client.get_schema(id).schema_str)
distinctValueSchemaIdDF = cachedDf.select(fn.col('valueSchemaId').cast('integer')).distinct()
for valueRow in distinctValueSchemaIdDF.collect():
currentValueSchemaId = sc.broadcast(valueRow.valueSchemaId)
currentValueSchema = sc.broadcast(getSchema(currentValueSchemaId.value))
filterValueDF = cachedDf.filter(fn.col('valueSchemaId') == currentValueSchemaId.value)
filterValueDF \
.select('topic', 'partition', 'offset', 'timestamp', 'timestampType', 'key', from_avro('fixedValue', currentValueSchema.value, fromAvroOptions).alias('parsedValue')) \
.write \
.format("delta") \
.mode("append") \
.option("mergeSchema", "true") \
.save(deltaTablePath)
Finally written to a delta table:
rawAvroDf.writeStream \
.option("checkpointLocation", checkpointPath) \
.foreachBatch(parseAvroDataWithSchemaId) \
.queryName("clickStreamTestFromConfluent") \
.start()
Created a (Bronze/Landing) Delta Live Table
import dlt
import pyspark.sql.functions as fn
from pyspark.sql.types import StringType
#dlt.table(
name = "<<landingTable>>",
path = "<<storage path>>",
comment = "<< descriptive comment>>"
)
def landingTable():
jasConfig = "kafkashaded.org.apache.kafka.common.security.plain.PlainLoginModule required username='{}' password='{}';".format(confluentApiKey, confluentSecret)
binary_to_string = fn.udf(lambda x: str(int.from_bytes(x, byteorder='big')), StringType())
kafkaOptions = {
"kafka.bootstrap.servers": confluentBootstrapServers,
"kafka.security.protocol": "SASL_SSL",
"kafka.sasl.jaas.config": jasConfig,
"kafka.ssl.endpoint.identification.algorithm": "https",
"kafka.sasl.mechanism": "PLAIN",
"subscribe": confluentTopicName,
"startingOffsets": "earliest",
"failOnDataLoss": "false"
}
return (
spark
.readStream
.format("kafka")
.options(**kafkaOptions)
.load()
.withColumn('key', fn.col("key").cast(StringType()))
.withColumn('valueSchemaId', binary_to_string(fn.expr("substring(value, 2, 4)")))
.withColumn('avroValue', fn.expr("substring(value, 6, length(value)-5)"))
.select(
'topic',
'partition',
'offset',
'timestamp',
'timestampType',
'key',
'valueSchemaId',
'avroValue'
)
Help Required on:
Ensure that the landing table is a STREAMING LIVE TABLE
Deserialize the avro encode message-value (a STREAMING LIVE VIEW calling a python UDF?)

create spark connection as part of python function

I am trying to create spark connection as part of spark_conn() function and use this connection throughout the other functions. For example in the below code, I am using spark connection created as part of spark_conn() function in read_data() function as below. Is my approach correct?
from pyspark.sql import SparkSession
def spark_conn():
spark = SparkSession \
.builder \
.appName("sparkConnection") \
.getOrCreate()
return spark
def read_data(spark, SNOWFLAKE_SOURCE_NAME, snowflake_options, loadtime, sftable):
df = spark.read \
.format(SNOWFLAKE_SOURCE_NAME) \
.options(**snowflake_options) \
.option("query","SELECT * FROM sftable WHERE SNAPSHOT==loadtime") \
.load()
if __name__=="__main__":
conn = spark_conn()
rd = read_data(conn, SNOWFLAKE_SOURCE_NAME, snowflake_options, loadtime, sftable)

PySpark how to correctly start streaming query

I am working on a structured streaming program. I have below code
def dataload(sparkSession):
df = sparkSession.readStream \
.format("kafka") \
.option("kafka.bootstrap.servers", "localhost:9092") \
.option("subscribe", "bar") \
.option("startingOffsets", "earliest") \
.load()
return df
if __name__ == '__main__':
sparkSession = createSparkSession()
df = dataload(sparkSession)
df.select("value").foreach(lambda bytebuffer: processFrame(bytebuffer=bytebuffer.value)).groupBy(window("timestamp","10 minutes","10 minutes"),"key").count() \
.writeStream \
.queryName("qraw") \
.outputMode("append")\
.format("console") \
.start().awaitTermination()
With above code I keep getting the error
pyspark.sql.utils.AnalysisException: Queries with streaming sources must be executed with writeStream.start();
kafka
I do not know where is the error

pyspark kafka streaming data handler

I'm using spark 2.3.2 with pyspark and just figured out that foreach and foreachBatch are not available in 'DataStreamWriter' object in this configuration. The problem is the company Hadoop is 2.6 and spark 2.4(that provides what I need) doesn't work(SparkSession is crashing). There is some another alternative to send data to a custom handler and process streaming data?
This is my code until now:
def streamLoad(self,customHandler):
options = self.options
self.logger.info("Recuperando o schema baseado na estrutura do JSON")
jsonStrings = ['{"sku":"9","ean":"4","name":"DVD","description":"foo description","categories":[{"code":"M02_BLURAY_E_DVD_PLAYER"}],"attributes":[{"name":"attrTeste","value":"Teste"}]}']
myRDD = self.spark.sparkContext.parallelize(jsonStrings)
jsonSchema = self.spark.read.json(myRDD).schema # Maybe there is a way to serialize this
self.logger.info("Iniciando o streaming no Kafka[opções: {}]".format(str(options)))
df = self.spark \
.readStream \
.format("kafka") \
.option("maxFilesPerTrigger", 1) \
.option("kafka.bootstrap.servers", options["kafka.bootstrap.servers"]) \
.option("startingOffsets", options["startingOffsets"]) \
.option("subscribe", options["subscribe"]) \
.option("failOnDataLoss", options["failOnDataLoss"]) \
.load() \
.select(
col('value').cast("string").alias('json'),
col('key').cast("string").alias('kafka_key'),
col("timestamp").cast("string").alias('kafka_timestamp')
) \
.withColumn('pjson', from_json(col('json'), jsonSchema)).drop('json')
query = df \
.writeStream \
.foreach(customHandler) \ #This doesn't work in spark 2.3.x Alternatives, please?
.start()
query.awaitTermination()

kafka to pyspark structured streaming, parsing json as dataframe

I am experimenting with spark structured streaming (spark v2.2.0) to consume json data from kafka. However I encountered the following error.
pyspark.sql.utils.StreamingQueryException: 'Missing required
configuration "partition.assignment.strategy" which has no default
value.
Does anyone know why? The job was submitted using spark-submit below.
spark-submit --packages org.apache.spark:spark-sql-kafka-0-10_2.11:2.2.0 sparksstream.py
This is the entire python script.
from pyspark.sql import SparkSession
from pyspark.sql.functions import *
from pyspark.sql.types import *
spark = SparkSession \
.builder \
.appName("test") \
.getOrCreate()
# Define schema of json
schema = StructType() \
.add("Session-Id", StringType()) \
.add("TransactionTimestamp", IntegerType()) \
.add("User-Name", StringType()) \
.add("ID", StringType()) \
.add("Timestamp", IntegerType())
# load data into spark-structured streaming
df = spark \
.readStream \
.format("kafka") \
.option("kafka.bootstrap.servers", "xxxx:9092") \
.option("subscribe", "topicName") \
.load() \
.select(from_json(col("value").cast("string"), schema).alias("parsed_value"))
# Print output
query = df.writeStream \
.outputMode("append") \
.format("console") \
.start()
use this instead to submit:
spark-submit \
--conf "spark.driver.extraClassPath=$SPARK_HOME/jars/kafka-clients-1.1.0.jar" \
--packages org.apache.spark:spark-sql-kafka-0-10_2.11:2.2.0 \
sparksstream.py
Assuming that you have donwloaded the kafka-clients*jar in you $SPARK_HOME/jars folder