Using Drools in a heavy batch process - drools

We used Drools as part of a solution to act as a sort of filter in a very intense processing application, maybe running up to 100 rules on 500,000 + working memory objects.
turns out that it is extremely slow.
anybody else have any experience using Drools in a batch type processing application?

Kind of depends on your rules - 500K objects is reasonable given enough memory (it has to populate a RETE network in memory, so memory usage is a multiple of 500K objects - ie space for objects + space for network structure, indexes etc) - its possible you are paging to disk which would be really slow.
Of course, if you have rules that match combinations of the same type of fact, that can cause an explosion of combinations to try, which even if you have 1 rule will be really really slow.
If you had any more information on the analysis you are doing that would probably help with possible solutions.

I've used a Drools with a stateful working memory containing over 1M facts. With some tuning of both your rules and the underlying JVM, performance can be quite good after a few minutes for initial start-up. Let me know if you want more details.

I haven't worked with the latest version of Drools (last time I used it was about a year ago), but back then our high-load benchmarks proved it to be utterly slow. A huge disappointment after having based much of our architecture on it.
At least something good I remember about drools is that their dev team was available on IRC and very helpful, you might give them a try, they're the experts after all: irc.codehaus.org #drools

I'm just learning drools myself, so maybe I'm missing something, but why is the whole batch of five hundred thousand objects added to working memory at once? The only reason I can think of is that there are rules that kick in only when two or more items in the batch are related.
If that isn't the case, then perhaps you could use a stateless session and assert one object at a time. I assume rules will run 500k times faster in that case.
Even if it is the case, do all your rules need access to all 500k objects? Could you speed things up by applying per-item rules one at a time, and then in a second phase of processing apply batch level rules using a different rulebase and working memory? This would not change the volume of data, but the RETE network would be smaller because the simple rules would have been removed.
An alternative approach would be to try and identify the related groups of objects and assert the objects in groups during the second phase, further reducing the volume of data in working memory as well as splitting up the RETE network.

Drools is not really designed to be run on a huge number of objects. It's optimized for running complex rules on a few objects.
The working memory initialization for each additional object is too slow and the caching strategies are designed to work per working memory object.

Use a stateless session and add the objects one at a time ?

I had problems with OutOfMemory errors after parsing a few thousand objects. Setting a different default optimizer solved the problem.
OptimizerFactory.setDefaultOptimizer(OptimizerFactory.SAFE_REFLECTIVE);

We were looking at drools as well, but for us the number of objects is low so this isn't an issue. I do remember reading that there are alternate versions of the same algorithm that take memory usage more into account, and are optimized for speed while still being based on the same algorithm. Not sure if any of them have made it into a real usable library though.

this optimizer can also be set by using parameter
-Dmvel2.disable.jit=true

Related

Minizinc, Gecode, how to get an identical solutions across distributed servers, with multi-solution model?

I am using minizinc and gecode to solve a minimization problem in a distributed fashion. I have multiple distributed servers that solve the same model with identical input and I want all the servers to get the same solution.
The problem is that model has multiple solutions, which periodically causes servers to come up with different solutions independently. It is not significant which solution will be chosen, as long as it is identical among all servers. I am also using "-p" arguments with gecode to use multiple threads (if it is relevant).
Is there a way that I could address this issue?
For example, I was thinking about outputting all the solutions and then sort them alphanumerically on each server.
Thanks!
If the search strategy in the model does not contain randomisation, then, assuming all versioning is the same, a single thread executing of Gecode should always return the same answer for the same model and instance data. It does not matter if it's on a different node. Using single threaded execution is the easiest way of ensuring that the same solution is found on all nodes.
If you are however want to use multiple threads, no such guarantee can be made. Due to the concurrency of the program, the execution path can be different every run and a different solution might be found each time.
Your suggestion of sorting the solution is possible, but will come at a price. There are two ways of doing this. You can either find all solutions, using the -a flag, and sort them afterwards or you can change your model to force the solution to be the first solution if you would sort them. This second option can be achieved by changing the search strategy. Both these solutions can be very costly and might (more than) exponentially increase the runtime.
If you are concerned about runtime at all, then I suggest you take Patrick Trentin's advice and run the model on a master node and distribute the solution. This will be the most efficient in computational time and most likely as efficient in runtime.

When's the time to create dedicated collections in MongoDB to avoid difficult queries?

I am asking a question that I assume does not have a simple black and white question but the principal of which I'm asking is clear.
Sample situation:
Lets say I have a collection of 1 million books, and I consistently want to always pull the top 100 rated.
Let's assume that I need to perform an aggregate function every time I perform this query which makes it a little expensive.
It is reasonable, that instead of running the query for every request (100-1000 a second), I would create a dedicated collection that only stores the top 100 books that gets updated every minute or so, thus instead of running a difficult query a 100 times every second, I only run it once a minute, and instead pull from a small collection of books that only holds the 100 books and that requires no query (just get everything).
That is the principal I am questioning.
Should I create a dedicated collection for EVERY query that is often
used?
Should I do it only for complicated ones?
How do I gauge which is complicated enough and which is simple enough
to leave as is?
Is there any guidelines for best practice in those types of
situations?
Is there a point where if a query runs so often and the data doesn't
change very often that I should keep the data in the server's memory
for direct access? Even if it's a lot of data? How much is too much?
Lastly,
Is there a way in MongoDB to cache results?
If so, how can I tell it to fetch the cached result, and when to regenerate the cache?
Thank you all.
Before getting to collection specifics, one does have to differentiate between "real-time data" vis-a-vis data which does not require immediate and real-time presenting of information. The rules for "real-time" systems are obviously much different.
Now to your example starting from the end. The cache of query results. The answer is not only for MongoDB. Data architects often use Redis, or memcached (or other cache systems) to hold all types of information. This though, obviously, is a function of how much memory is available to your system and the DB. You do not want to cripple the DB by giving your cache too much of available memory, and you do not want your cache to be useless by giving it too little.
In the book case, of 100 top ones, since it is certainly not a real time endeavor, it would make sense to cache the query and feed that cache out to requests. You could update the cache based upon a cron job or based upon an update flag (which you create to inform your program that the 100 have been updated) and then the system will run an $aggregate in the background.
Now to the first few points:
Should I create a dedicated collection for EVERY query that is often used?
Yes and no. It depends on the amount of data which has to be searched to $aggregate your response. And again, it also depends upon your memory limitations and btw let me add the whole server setup in terms of speed, cores and memory. MHO - cache is much better, as it avoids reading from the data all the time.
Should I do it only for complicated ones?
How do I gauge which is complicated enough and which is simple enough to leave as is?
I dont think anyone can really black and white answer to that question for your system. Is a complicated query just an $aggregate? Or is it $unwind and then a whole slew of $group etc. options following? this is really up to the dataset and how much information must actually be read and sifted and manipulated. It will effect your IO and, yes, again, the memory.
Is there a point where if a query runs so often and the data doesn't change very often that I should keep the data in the server's memory for direct access? Even if it's a lot of data? How much is too much?
See answers above this is directly connected to your other questions.
Finally:
Is there any guidelines for best practice in those types of situations?
The best you can do here is to time the procedures in your code, monitor memory usage and limits, look at the IO, study actual reads and writes on the collections.
Hope this helps.
Use a cache to store objects. For example in Redis use Redis Lists
Redis Lists are simply lists of strings, sorted by insertion order
Then set expiry to either a timeout or a specific time
Now whenever you have a miss in Redis, run the query in MongoDB and re-populate your cache. Also since cache resids in memory therefore your fetches will be extremely fast as compared to dedicated collections in MongoDB.
In addition to that, you don't have to keep have a dedicated machine, just deploy it within your application machine.

Scala: performance boost on incremental garbage collection

I have written an application in Scala. Basically, the first step is to create a array of objects an then to initialise these objects from a csv file. When running the application on the jvm it is really slow, and after some experimenting I found out that using the -J-Xincgc flag which enables incremental garbage collection speeds up the application by a factor of 4 (it's 4 times faster with the switch!). I wonder:
Why?
Did I use some inefficient coding, and if so, where should I start to find out whats going on?
Thanks!
I'll assume you're running this on hotspot.
The hotspot JVM has a whole zoo of garbage collectors, most of which also may have some sort of sub-modes or various command-line switches that significantly alter their behavior.
Which GC is used by default varies based on JVM version, operating system and 32/64bit VM.
So you basically changed whatever the default was to a specific algorithm that happened to perform "faster" for your workload.
But "faster" is a fuzzy measure. Wall time is not the same as CPU cycles spent if you consider multi-threading. And some collectors may simply choose to grow the heap more aggressively, thus deferring the cost of collection to a later point in time, which you might not have measured if your program didn't run long enough.
To make an accurate assessment much more information would be needed
what GC was used by default
your VM version
how many cores your CPU has
what kind of workload do you have (multi/single-thread, long/short-running, expected memory footprint, object allocation rate)
Oracle's GC tuning guide may prove useful for you
In your case, -Xincgc translates to CMS in incremental mode, which is intended for single-core environments and has been deprecated as of java8. It probably just happened to be better than the default, but it's not necessarily an optimal choice.
If you get into a situation where you are running close to your heap-size limit, you can waste a lot of GC time, which can lead to a lot of false findings about performance. If that's your situation, first increase your heap-size limit before doing anything else. Consider use of jvisualvm to eyeball the situation - it's trivially easy to get started with.

Drools is very slow in processing big data

We have integrated Drools with Talend ETL. Drools takes lot of time to process records counting upto half a million or more. How can we increase the processing speed of drools. I am familiar with drools coding but i am not aware how drools internally works. please help me with this issue. It would be really greatful. I am not sure whether I have given right tags i.e whether they have the right answer. But please do help me on this as it is needed.
The typical problems involve:
Not using == constraints, to allow for indexing.
Make sure you have the field on the left, and the variable on the right.
Not having your most restrictive patterns and constraints first
Not ensuring your rules are written to avoid large cross products
Use of multiple accumulates per rule, or sub networks.
The last issue is improved in Drools 6.0.

Key Value storage without a file system?

I am working on an application, where we are writing lots and lots of key value pairs. On production the database size will run into hundreds of Terabytes, even multiple Petabytes. The keys are 20 bytes and the value is maximum 128 KB, and very rarely smaller than 4 KB. Right now we are using MongoDB. The performance is not very good, because obviously there is a lot of overhead going on here. MongoDB writes to the file system, which writes to the LVM, which further writes to a RAID 6 array.
Since our requirement is very basic, I think using a general purpose database system is hitting the performance. I was thinking of implementing a simple database system, where we could put the documents (or 'values') directly to the raw drive (actually the RAID array), and store the keys (and a pointer to where the value lives on the raw drive) in a fast in-memory database backed by an SSD. This will also speed-up the reads, as all there would not be no fragmentation (as opposed to using a filesystem.)
Although a document is rarely deleted, we would still have to maintain a pool of free space available on the device (something that the filesystem would have provided).
My question is, will this really provide any significant improvements? Also, are there any document storage systems that do something like this? Or anything similar, that we can use as a starting poing?
Apache Cassandra jumps to mind. It's the current elect NoSQL solution where massive scaling is concerned. It sees production usage at several large companies with massive scaling requirements. Having worked a little with it, I can say that it requires a little bit of time to rethink your data model to fit how it arranges its storage engine. The famously citied article "WTF is a supercolumn" gives a sound introduction to this. Caveat: Cassandra really only makes sense when you plan on storing huge datasets and distribution with no single point of failure is a mission critical requirement. With the way you've explained your data, it sounds like a fit.
Also, have you looked into redis at all, at least for saving key references? Your memory requirements far outstrip what a single instance would be able to handle but Redis can also be configured to shard. It isn't its primary use case but it sees production use at both Craigslist and Groupon
Also, have you done everything possible to optimize mongo, especially investigating how you could improve indexing? Mongo does save out to disk, but should be relatively performant when optimized to keep the hottest portion of the set in memory if able.
Is it possible to cache this data if its not too transient?
I would totally caution you against rolling your own with this. Just a fair warning. That's not a knock at you or anyone else, its just that I've personally had to maintain custom "data indexes" written by in house developers who got in way over their heads before. At my job we have a massive on disk key-value store that is a major performance bottleneck in our system that was written by a developer who has since separated from the company. It's frustrating to be stuck such a solution among the exciting NoSQL opportunities of today. Projects like the ones I cited above take advantage of the whole strength of the open source community to proof and optimize their use. That isn't something you will be able to attain working on your own solution unless you make a massive investment of time, effort and promotion. At the very least I'd encourage you to look at all your nosql options and maybe find a project you can contribute to rather than rolling your own. Writing a database server itself is definitely a nontrivial task that needs a huge team, especially with the requirements you've given (but should you end up doing so, I wish you luck! =) )
Late answer, but for future reference I think Spider does this