Types and classes of variables - class

Two R questions:
What is the difference between the type (returned by typeof) and the class (returned by class) of a variable? Is the difference similar to that in, say, C++ language?
What are possible types and classes of variables?

In R every "object" has a mode and a class. The former represents how an object is stored in memory (numeric, character, list and function) while the later represents its abstract type. For example:
d <- data.frame(V1=c(1,2))
class(d)
# [1] "data.frame"
mode(d)
# [1] "list"
typeof(d)
# list
As you can see data frames are stored in memory as list but they are wrapped into data.frame objects. The latter allows for usage of member functions as well as overloading functions such as print with a custom behavior.
typeof(storage.mode) will usually give the same information as mode but not always. Case in point:
typeof(c(1,2))
# [1] "double"
mode(c(1,2))
# [1] "numeric"
The reasoning behind this can be found here:
The R specific function typeof returns the type of an R object
Function mode gives information about the mode of an object in the sense of Becker, Chambers & Wilks (1988), and is more compatible with other implementations of the S language
The link that I posted above also contains a list of all native R basic types (vectors, lists etc.) and all compound objects (factors and data.frames) as well as some examples of how mode, typeof and class are related for each type.

type really refers to the different data structures available in R. This discussion in the R Language Definition manual may get you started on objects and types.
On the other hand, class means something else in R than what you may expect. From
the R Language Definition manual (that came with your version of R):
2.2.4 Classes
R has an elaborate class system1, principally controlled via the class attribute. This attribute is a character vector containing the list
of classes that an object inherits from. This forms the basis of the “generic methods” functionality in R.
This attribute can be accessed and manipulated virtually without restriction by users. There is no checking that an object actually contains the components that class methods expect. Thus, altering the class attribute should be done with caution, and when they are available specific creation and coercion functions should be preferred.

Related

Does Scala have a value restriction like ML, if not then why?

Here’s my thoughts on the question. Can anyone confirm, deny, or elaborate?
I wrote:
Scala doesn’t unify covariant List[A] with a GLB ⊤ assigned to List[Int], bcz afaics in subtyping “biunification” the direction of assignment matters. Thus None must have type Option[⊥] (i.e. Option[Nothing]), ditto Nil type List[Nothing] which can’t accept assignment from an Option[Int] or List[Int] respectively. So the value restriction problem originates from directionless unification and global biunification was thought to be undecidable until the recent research linked above.
You may wish to view the context of the above comment.
ML’s value restriction will disallow parametric polymorphism in (formerly thought to be rare but maybe more prevalent) cases where it would otherwise be sound (i.e. type safe) to do so such as especially for partial application of curried functions (which is important in functional programming), because the alternative typing solutions create a stratification between functional and imperative programming as well as break encapsulation of modular abstract types. Haskell has an analogous dual monomorphisation restriction. OCaml has a relaxation of the restriction in some cases. I elaborated about some of these details.
EDIT: my original intuition as expressed in the above quote (that the value restriction may be obviated by subtyping) is incorrect. The answers IMO elucidate the issue(s) well and I’m unable to decide which in the set containing Alexey’s, Andreas’, or mine, should be the selected best answer. IMO they’re all worthy.
As I explained before, the need for the value restriction -- or something similar -- arises when you combine parametric polymorphism with mutable references (or certain other effects). That is completely independent from whether the language has type inference or not or whether the language also allows subtyping or not. A canonical counter example like
let r : ∀A.Ref(List(A)) = ref [] in
r := ["boo"];
head(!r) + 1
is not affected by the ability to elide the type annotation nor by the ability to add a bound to the quantified type.
Consequently, when you add references to F<: then you need to impose a value restriction to not lose soundness. Similarly, MLsub cannot get rid of the value restriction. Scala enforces a value restriction through its syntax already, since there is no way to even write the definition of a value that would have polymorphic type.
It's much simpler than that. In Scala values can't have polymorphic types, only methods can. E.g. if you write
val id = x => x
its type isn't [A] A => A.
And if you take a polymorphic method e.g.
def id[A](x: A): A = x
and try to assign it to a value
val id1 = id
again the compiler will try (and in this case fail) to infer a specific A instead of creating a polymorphic value.
So the issue doesn't arise.
EDIT:
If you try to reproduce the http://mlton.org/ValueRestriction#_alternatives_to_the_value_restriction example in Scala, the problem you run into isn't the lack of let: val corresponds to it perfectly well. But you'd need something like
val f[A]: A => A = {
var r: Option[A] = None
{ x => ... }
}
which is illegal. If you write def f[A]: A => A = ... it's legal but creates a new r on each call. In ML terms it would be like
val f: unit -> ('a -> 'a) =
fn () =>
let
val r: 'a option ref = ref NONE
in
fn x =>
let
val y = !r
val () = r := SOME x
in
case y of
NONE => x
| SOME y => y
end
end
val _ = f () 13
val _ = f () "foo"
which is allowed by the value restriction.
That is, Scala's rules are equivalent to only allowing lambdas as polymorphic values in ML instead of everything value restriction allows.
EDIT: this answer was incorrect before. I have completely rewritten the explanation below to gather my new understanding from the comments under the answers by Andreas and Alexey.
The edit history and the history of archives of this page at archive.is provides a recording of my prior misunderstanding and discussion. Another reason I chose to edit rather than delete and write a new answer, is to retain the comments on this answer. IMO, this answer is still needed because although Alexey answers the thread title correctly and most succinctly—also Andreas’ elaboration was the most helpful for me to gain understanding—yet I think the layman reader may require a different, more holistic (yet hopefully still generative essence) explanation in order to quickly gain some depth of understanding of the issue. Also I think the other answers obscure how convoluted a holistic explanation is, and I want naive readers to have the option to taste it. The prior elucidations I’ve found don’t state all the details in English language and instead (as mathematicians tend to do for efficiency) rely on the reader to discern the details from the nuances of the symbolic programming language examples and prerequisite domain knowledge (e.g. background facts about programming language design).
The value restriction arises where we have mutation of referenced1 type parametrised objects2. The type unsafety that would result without the value restriction is demonstrated in the following MLton code example:
val r: 'a option ref = ref NONE
val r1: string option ref = r
val r2: int option ref = r
val () = r1 := SOME "foo"
val v: int = valOf (!r2)
The NONE value (which is akin to null) contained in the object referenced by r can be assigned to a reference with any concrete type for the type parameter 'a because r has a polymorphic type a'. That would allow type unsafety because as shown in the example above, the same object referenced by r which has been assigned to both string option ref and int option ref can be written (i.e. mutated) with a string value via the r1 reference and then read as an int value via the r2 reference. The value restriction generates a compiler error for the above example.
A typing complication arises to prevent3 the (re-)quantification (i.e. binding or determination) of the type parameter (aka type variable) of a said reference (and the object it points to) to a type which differs when reusing an instance of said reference that was previously quantified with a different type.
Such (arguably bewildering and convoluted) cases arise for example where successive function applications (aka calls) reuse the same instance of such a reference. IOW, cases where the type parameters (pertaining to the object) for a reference are (re-)quantified each time the function is applied, yet the same instance of the reference (and the object it points to) being reused for each subsequent application (and quantification) of the function.
Tangentially, the occurrence of these is sometimes non-intuitive due to lack of explicit universal quantifier ∀ (since the implicit rank-1 prenex lexical scope quantification can be dislodged from lexical evaluation order by constructions such as let or coroutines) and the arguably greater irregularity (as compared to Scala) of when unsafe cases may arise in ML’s value restriction:
Andreas wrote:
Unfortunately, ML does not usually make the quantifiers explicit in its syntax, only in its typing rules.
Reusing a referenced object is for example desired for let expressions which analogous to math notation, should only create and evaluate the instantiation of the substitutions once even though they may be lexically substituted more than once within the in clause. So for example, if the function application is evaluated as (regardless of whether also lexically or not) within the in clause whilst the type parameters of substitutions are re-quantified for each application (because the instantiation of the substitutions are only lexically within the function application), then type safety can be lost if the applications aren’t all forced to quantify the offending type parameters only once (i.e. disallow the offending type parameter to be polymorphic).
The value restriction is ML’s compromise to prevent all unsafe cases while also preventing some (formerly thought to be rare) safe cases, so as to simplify the type system. The value restriction is considered a better compromise, because the early (antiquated?) experience with more complicated typing approaches that didn’t restrict any or as many safe cases, caused a bifurcation between imperative and pure functional (aka applicative) programming and leaked some of the encapsulation of abstract types in ML functor modules. I cited some sources and elaborated here. Tangentially though, I’m pondering whether the early argument against bifurcation really stands up against the fact that value restriction isn’t required at all for call-by-name (e.g. Haskell-esque lazy evaluation when also memoized by need) because conceptually partial applications don’t form closures on already evaluated state; and call-by-name is required for modular compositional reasoning and when combined with purity then modular (category theory and equational reasoning) control and composition of effects. The monomorphisation restriction argument against call-by-name is really about forcing type annotations, yet being explicit when optimal memoization (aka sharing) is required is arguably less onerous given said annotation is needed for modularity and readability any way. Call-by-value is a fine tooth comb level of control, so where we need that low-level control then perhaps we should accept the value restriction, because the rare cases that more complex typing would allow would be less useful in the imperative versus applicative setting. However, I don’t know if the two can be stratified/segregated in the same programming language in smooth/elegant manner. Algebraic effects can be implemented in a CBV language such as ML and they may obviate the value restriction. IOW, if the value restriction is impinging on your code, possibly it’s because your programming language and libraries lack a suitable metamodel for handling effects.
Scala makes a syntactical restriction against all such references, which is a compromise that restricts for example the same and even more cases (that would be safe if not restricted) than ML’s value restriction, but is more regular in the sense that we’ll not be scratching our head about an error message pertaining to the value restriction. In Scala, we’re never allowed to create such a reference. Thus in Scala, we can only express cases where a new instance of a reference is created when it’s type parameters are quantified. Note OCaml relaxes the value restriction in some cases.
Note afaik both Scala and ML don’t enable declaring that a reference is immutable1, although the object they point to can be declared immutable with val. Note there’s no need for the restriction for references that can’t be mutated.
The reason that mutability of the reference type1 is required in order to make the complicated typing cases arise, is because if we instantiate the reference (e.g. in for example the substitutions clause of let) with a non-parametrised object (i.e. not None or Nil4 but instead for example a Option[String] or List[Int]), then the reference won’t have a polymorphic type (pertaining to the object it points to) and thus the re-quantification issue never arises. So the problematic cases are due to instantiation with a polymorphic object then subsequently assigning a newly quantified object (i.e. mutating the reference type) in a re-quantified context followed by dereferencing (reading) from the (object pointed to by) reference in a subsequent re-quantified context. As aforementioned, when the re-quantified type parameters conflict, the typing complication arises and unsafe cases must be prevented/restricted.
Phew! If you understood that without reviewing linked examples, I’m impressed.
1 IMO to instead employ the phrase “mutable references” instead of “mutability of the referenced object” and “mutability of the reference type” would be more potentially confusing, because our intention is to mutate the object’s value (and its type) which is referenced by the pointer— not referring to mutability of the pointer of what the reference points to. Some programming languages don’t even explicitly distinguish when they’re disallowing in the case of primitive types a choice of mutating the reference or the object they point to.
2 Wherein an object may even be a function, in a programming language that allows first-class functions.
3 To prevent a segmentation fault at runtime due to accessing (read or write of) the referenced object with a presumption about its statically (i.e. at compile-time) determined type which is not the type that the object actually has.
4 Which are NONE and [] respectively in ML.

How do purely functional compilers annotate the AST with type info?

In the syntax analysis phase, an imperative compiler can build an AST out of nodes that already contain a type field that is set to null during construction, and then later, in the semantic analysis phase, fill in the types by assigning the declared/inferred types into the type fields.
How do purely functional languages handle this, where you do not have the luxury of assignment? Is the type-less AST mapped to a different kind of type-enriched AST? Does that mean I need to define two types per AST node, one for the syntax phase, and one for the semantic phase?
Are there purely functional programming tricks that help the compiler writer with this problem?
I usually rewrite a source (or an already several steps lowered) AST into a new form, replacing each expression node with a pair (tag, expression).
Tags are unique numbers or symbols which are then used by the next pass which derives type equations from the AST. E.g., a + b will yield something like { numeric(Tag_a). numeric(Tag_b). equals(Tag_a, Tag_b). equals(Tag_e, Tag_a).}.
Then types equations are solved (e.g., by simply running them as a Prolog program), and, if successful, all the tags (which are variables in this program) are now bound to concrete types, and if not, they're left as type parameters.
In a next step, our previous AST is rewritten again, this time replacing tags with all the inferred type information.
The whole process is a sequence of pure rewrites, no need to replace anything in your AST destructively. A typical compilation pipeline may take a couple of dozens of rewrites, some of them changing the AST datatype.
There are several options to model this. You may use the same kind of nullable data fields as in your imperative case:
data Exp = Var Name (Maybe Type) | ...
parse :: String -> Maybe Exp -- types are Nothings here
typeCheck :: Exp -> Maybe Exp -- turns Nothings into Justs
or even, using a more precise type
data Exp ty = Var Name ty | ...
parse :: String -> Maybe (Exp ())
typeCheck :: Exp () -> Maybe (Exp Type)
I cant speak for how it is supposed to be done, but I did do this in F# for a C# compiler here
The approach was basically - build an AST from the source, leaving things like type information unconstrained - So AST.fs basically is the AST which strings for the type names, function names, etc.
As the AST starts to be compiled to (in this case) .NET IL, we end up with more type information (we create the types in the source - lets call these type-stubs). This then gives us the information needed to created method-stubs (the code may have signatures that include type-stubs as well as built in types). From here we now have enough type information to resolve any of the type names, or method signatures in the code.
I store that in the file TypedAST.fs. I do this in a single pass, however the approach may be naive.
Now we have a fully typed AST you could then do things like compile it, fully analyze it, or whatever you like with it.
So in answer to the question "Does that mean I need to define two types per AST node, one for the syntax phase, and one for the semantic phase?", I cant say definitively that this is the case, but it is certainly what I did, and it appears to be what MS have done with Roslyn (although they have essentially decorated the original tree with type info IIRC)
"Are there purely functional programming tricks that help the compiler writer with this problem?"
Given the ASTs are essentially mirrored in my case, it would be possible to make it generic and transform the tree, but the code may end up (more) horrendous.
i.e.
type 'type AST;
| MethodInvoke of 'type * Name * 'type list
| ....
Like in the case when dealing with relational databases, in functional programming it is often a good idea not to put everything in a single data structure.
In particular, there may not be a data structure that is "the AST".
Most probably, there will be data structures that represent parsed expressions. One possible way to deal with type information is to assign a unique identifier (like an integer) to each node of the tree already during parsing and have some suitable data structure (like a hash map) that associates those node-ids with types. The job of the type inference pass, then, would be just to create this map.

Fortran numeric class

In fortran I can use Class (*) in a subroutine and use
Select Type (ir)
Type Is (Integer (Int8))
Type Is (Integer (Int16))
End Select
Does there exist any way to pass a numeric value rather than using Class (*), by using Class (Integer) for example or something similar.
Intrinsic types are not extended types, they have no common ancestor, nothing like that exist. You can use the unlimited polymorphism (class(*)) or you must indicate exact type and kind (real(dp)). You can also write type(real) in Fortran 2008, but that does not change anything, it is just a different syntax for the same.
Have a look at some common techniques for generic programming with different kinds like, for example, How to make some generic programming in fortran 90/95 working with intrinsic types , STL analogue in Fortran and others. You normally make a separate procedure for each kind and paste the code body from an include file.

Definition of statically typed and dynamically types

Which of these two definitions is correct?
Statically typed - Type matching is checked at compile time (and therefore can only be applied to compiled languages)
Dynamically typed - Type matching is checked at run time, or not at all. (this term can be applied to compiled or interpreted languages)
Statically typed - Types are assigned to variables, so that I would say 'x is of type int'.
Dynamically typed - types are assigned to values (if at all), so that I would say 'x is holding an int'
By this definition, static or dynamic typing is not tied to compiled or interpreted languages.
Which is correct, or is neither one quite right?
Which is correct, or is neither one quite right?
The first pair of definitions are closer but not quite right.
Statically typed - Type matching is checked at compile time (and therefore can only be applied to compiled languages)
This is tricky. I think if a language were interpreted but did type checking before execution began then it would still be statically typed. The OCaml REPL is almost an example of this except it technically compiles (and type checks) source code into its own byte code and then interprets the byte code.
Dynamically typed - Type matching is checked at run time, or not at all.
Rather:
Dynamically typed - Type checking is done at run time.
Untyped - Type checking is not done.
Statically typed - Types are assigned to variables, so that I would say 'x is of type int'.
Dynamically typed - types are assigned to values (if at all), so that I would say 'x is holding an int'
Variables are irrelevant. Although you only see types explicitly in the source code of many statically typed languages at variable and function definitions all of the subexpressions also have static types. For example, "foo" + 3 is usually a static type error because you cannot add a string to an int but there is no variable involved.
One helpful way to look at the word static is this: static properties are those that hold for all possible executions of the program on all possible inputs. Then you can look at any given language or type system and consider which static properties can it verify, for example:
JavaScript: no segfaults/memory errors
Java/C#/F#: if a program compiled and a variable had a type T, then the variable only holds values of this type - in all executions. But, sadly, reference types also admit null as a value - the billion dollar mistake.
ML has no null, making the above guarantee stronger
Haskell can verify statements about side effects, for example a property such as "this program does not print anything on stdout"
Coq also verifies termination - "this program terminates on all inputs"
How much do you want to verify, this depends on taste and the problem at hand. All magic (verification) comes at price.
If you have never ever seen ML before, do give it a try. At least give 5 minutes of attention to Yaron Minsky's talk. It can change your life as a programmer.
The second is a better definition in my eyes, assuming you're not looking for an explanation as to why or how things work.
Better again would be to say that
Static typing gives variables an EXPLICIT type that CANNOT change
Dynamic typing gives variables an IMPLICIT type that CAN change
I like the latter definition. Consider the type checking when casting from a base class to a derived class in object oriented languages like Java or C++ which fits the second definition and not the first. It's a compiled language with (optional) dynamic type checking.

Closures in Scala vs Closures in Java

Some time ago Oracle decided that adding Closures to Java 8 would be an good idea. I wonder how design problems are solved there in comparison to Scala, which had closures since day one.
Citing the Open Issues from javac.info:
Can Method Handles be used for Function Types?
It isn't obvious how to make that work. One problem is that Method Handles reify type parameters, but in a way that interferes with function subtyping.
Can we get rid of the explicit declaration of "throws" type parameters?
The idea would be to use disjuntive type inference whenever the declared bound is a checked exception type. This is not strictly backward compatible, but it's unlikely to break real existing code. We probably can't get rid of "throws" in the type argument, however, due to syntactic ambiguity.
Disallow #Shared on old-style loop index variables
Handle interfaces like Comparator that define more than one method, all but one of which will be implemented by a method inherited from Object.
The definition of "interface with a single method" should count only methods that would not be implemented by a method in Object and should count multiple methods as one if implementing one of them would implement them all. Mainly, this requires a more precise specification of what it means for an interface to have only a single abstract method.
Specify mapping from function types to interfaces: names, parameters, etc.
We should fully specify the mapping from function types to system-generated interfaces precisely.
Type inference. The rules for type inference need to be augmented to accomodate the inference of exception type parameters. Similarly, the subtype relationships used by the closure conversion should be reflected as well.
Elided exception type parameters to help retrofit exception transparency.
Perhaps make elided exception type parameters mean the bound. This enables retrofitting existing generic interfaces that don't have a type parameter for the exception, such as java.util.concurrent.Callable, by adding a new generic exception parameter.
How are class literals for function types formed?
Is it #void().class ? If so, how does it work if object types are erased? Is it #?(?).class ?
The system class loader should dynamically generate function type interfaces.
The interfaces corresponding to function types should be generated on demand by the bootstrap class loader, so they can be shared among all user code. For the prototype, we may have javac generate these interfaces so prototype-generated code can run on stock (JDK5-6) VMs.
Must the evaluation of a lambda expression produce a fresh object each time?
Hopefully not. If a lambda captures no variables from an enclosing scope, for example, it can be allocated statically. Similarly, in other situations a lambda could be moved out of an inner loop if it doesn't capture any variables declared inside the loop. It would therefore be best if the specification promises nothing about the reference identity of the result of a lambda expression, so such optimizations can be done by the compiler.
As far as I understand 2., 6. and 7. aren't a problem in Scala, because Scala doesn't use Checked Exceptions as some sort of "Shadow type-system" like Java.
What about the rest?
1) Can Method Handles be used for Function Types?
Scala targets JDK 5 and 6 which don't have method handles, so it hasn't tried to deal with that issue yet.
2) Can we get rid of the explicit declaration of "throws" type parameters?
Scala doesn't have checked exceptions.
3) Disallow #Shared on old-style loop index variables.
Scala doesn't have loop index variables. Still, the same idea can be expressed with a certain kind of while loop . Scala's semantics are pretty standard here. Symbols bindings are captured and if the symbol happens to map to a mutable reference cell then on your own head be it.
4) Handle interfaces like Comparator that define more than one method all but one of which come from Object
Scala users tend to use functions (or implicit functions) to coerce functions of the right type to an interface. e.g.
[implicit] def toComparator[A](f : (A, A) => Int) = new Comparator[A] {
def compare(x : A, y : A) = f(x, y)
}
5) Specify mapping from function types to interfaces:
Scala's standard library includes FuncitonN traits for 0 <= N <= 22 and the spec says that function literals create instances of those traits
6) Type inference. The rules for type inference need to be augmented to accomodate the inference of exception type parameters.
Since Scala doesn't have checked exceptions it can punt on this whole issue
7) Elided exception type parameters to help retrofit exception transparency.
Same deal, no checked exceptions.
8) How are class literals for function types formed? Is it #void().class ? If so, how does it work if object types are erased? Is it #?(?).class ?
classOf[A => B] //or, equivalently,
classOf[Function1[A,B]]
Type erasure is type erasure. The above literals produce scala.lang.Function1 regardless of the choice for A and B. If you prefer, you can write
classOf[ _ => _ ] // or
classOf[Function1[ _,_ ]]
9) The system class loader should dynamically generate function type interfaces.
Scala arbitrarily limits the number of arguments to be at most 22 so that it doesn't have to generate the FunctionN classes dynamically.
10) Must the evaluation of a lambda expression produce a fresh object each time?
The Scala specification does not say that it must. But as of 2.8.1 the the compiler does not optimizes the case where a lambda does not capture anything from its environment. I haven't tested with 2.9.0 yet.
I'll address only number 4 here.
One of the things that distinguishes Java "closures" from closures found in other languages is that they can be used in place of interface that does not describe a function -- for example, Runnable. This is what is meant by SAM, Single Abstract Method.
Java does this because these interfaces abound in Java library, and they abound in Java library because Java was created without function types or closures. In their absence, every code that needed inversion of control had to resort to using a SAM interface.
For example, Arrays.sort takes a Comparator object that will perform comparison between members of the array to be sorted. By contrast, Scala can sort a List[A] by receiving a function (A, A) => Int, which is easily passed through a closure. See note 1 at the end, however.
So, because Scala's library was created for a language with function types and closures, there isn't need to support such a thing as SAM closures in Scala.
Of course, there's a question of Scala/Java interoperability -- while Scala's library might not need something like SAM, Java library does. There are two ways that can be solved. First, because Scala supports closures and function types, it is very easy to create helper methods. For example:
def runnable(f: () => Unit) = new Runnable {
def run() = f()
}
runnable { () => println("Hello") } // creates a Runnable
Actually, this particular example can be made even shorter by use of Scala's by-name parameters, but that's beside the point. Anyway, this is something that, arguably, Java could have done instead of what it is going to do. Given the prevalence of SAM interfaces, it is not all that surprising.
The other way Scala handles this is through implicit conversions. By just prepending implicit to the runnable method above, one creates a method that gets automatically (note 2) applied whenever a Runnable is required but a function () => Unit is provided.
Implicits are very unique, however, and still controversial to some extent.
Note 1: Actually, this particular example was choose with some malice... Comparator has two abstract methods instead of one, which is the whole problem with it. Since one of its methods can be implemented in terms of the other, I think they'll just "subtract" defender methods from the abstract list.
And, on the Scala side, even though there's a sort method that uses (A, A) => Boolean, not (A, A) => Int, the standard sorting method calls for a Ordering object, which is quite similar to Java's Comparator! In Scala's case, though, Ordering performs the role of a type class.
Note 2: Implicits are automatically applied, once they have been imported into scope.