Eclipse generates my classes three times in wtpwebapps - eclipse

i had an issue with PrettyFaces framework that a class is found more than once when using eclipse to run application on server (tomcat 6)
what i found is that eclipse generates the class more than once in wtpwebapps:
\WEB-INF\classes\com\myapp\sample\beans\myclass.class
WEB-INF\classes\target\classes\com\myapp\sample\beans\myclass.class
\WEB-INF\classes\target\app-name\WEB-INF\classes\com\myapp\sample\beans\myclass.class
UPDATE:
i am using m2eclipse plugin, and using maven as my build tool, maybe there's a configuration wrong with them, or something needed to be configured.
UPDATE2:
here's the pom file build, maybe i have something wrong with it:
<build>
<finalName>appName</finalName>
<resources>
<resource>
<directory>src/main/resources</directory>
<filtering>true</filtering>
</resource>
</resources>
<plugins>
<plugin>
<groupId>org.apache.maven.plugins</groupId>
<artifactId>maven-compiler-plugin</artifactId>
<configuration>
<source>1.6</source>
<target>1.6</target>
</configuration>
</plugin>
<plugin>
<groupId>org.apache.maven.plugins</groupId>
<artifactId>maven-dependency-plugin</artifactId>
<executions>
<execution>
<id>install</id>
<phase>install</phase>
<goals>
<goal>sources</goal>
</goals>
</execution>
</executions>
</plugin>
<plugin>
<groupId>org.apache.maven.plugins</groupId>
<artifactId>maven-resources-plugin</artifactId>
<version>2.5</version>
<configuration>
<encoding>UTF-8</encoding>
</configuration>
</plugin>
</plugins>
</build>
any ideas how to fix this issue ?

I have you installed the "m2e wtp" connector ? Maven -> Discovery -> Open Catalog (in Indigo) search "wtp".
Consider using:
<properties>
<project.build.sourceEncoding>UTF-8</project.build.sourceEncoding>
</properties>
then there may not be any need for setting UTF-8 in the way you do. But maybe you have another encoding at this point, but then it would be strange to have *.java one encoding and resources in another. Best to make the whole project same.
Can you confirm if you are building a WAR and this is what you see in the WAR ? or if are using the launch Tomcat ability from Eclipse and this is what you see in the project.
Also confirm that you have used the Stop Tomcat, Clean, manually check the directory have cleared out (maybe do a workspace refresh, and another Servers -> Clean, manually delete files in Tomcat area). Then do a Full Publish (to tomcat) and then Start/Debug tomcat to launch.
I would guess if the configuration you now have is as above (and presuming no parent pom.xml is affecting the build do badly) that the files you see are a result of not cleaning the wtpwebapps area after messing around with the maven config.
There are multiple places to check gets cleaned:
Temporarly Turn off: Project -> Build Automatically
Stop All Servers instances running like: Tomcat
Run As -> Maven -> clean
Servers -> Clean
Open file browser and validate for yourself outside of Eclipse that the following dirs are empty or non-existant:
workspaceDirectory/projectDirectory/target (the maven output folder)
workspaceDirectory/metadata/.plugins/org.eclipse.wst.server.core/tmpX/wtpwebapps/**
# This one is ok to have the top level contextPath's, provind they are currently active projects you have added to the server.
$CATALINA_HOME/
Perform workspace refresh (to ensure Eclipse resync file system state to workspace state). I do this with clicking on any project in Project Explorer, then Ctrl-Clicking it again to deselect it (so nothing is selected but Project Explorer is in focus) then press F5. Other people use Ctrl-A to select all projects.
Now do a Project -> Build All
Now do a Servers -> Publish (now check the tree you get)
Now re-enable Project -> Build Automatically (if you run that way)

Related

How to rid latest Eclipse (2021-03) of MANIFEST.MF (No such file or directory) error?

Over the last few years, for our Parent POM project in Eclipse, I've had to employ slightly different tweaks to Eclipse's configuration, to avoid having Eclipse give errors like:
...target/classes/META-INF/MANIFEST.MF (No such file or directory) pom.xml
I know I can manually rid these errors, by right-clicking the parent project and doing
Maven > Update Project
but that only works until the next build when I do another "clean install".
In the past, I got Eclipse to stop complaining by making these 2 Eclipse tweaks:
Preferences > Maven > check "Automatically update Maven projects configuration (experimental)"
Preferences > Maven > Java EE Integration > uncheck "Maven Archiver generates files under the build directory".
But, this no longer work, with the latest versions of Eclipse (e.g., Version: 2021-03).
Why does Eclipse do this and how can I rid myself of this annoyance, once and for all?
I found a solution.
The problem is caused by the standard maven-compiler-plugin. When it generates a JAR file, it deletes target/classes/META-INF/MANIFEST.MF.
Eventually (but not right away), Eclipse notices this and complains that the manifest file is missing.
Cleaning the project (as often recommended in related Stack Overflow questions) is not a solution. Although it makes the errors go away temporarily, the errors will soon return, the next time maven-compiler-plugin generates another JAR file.
A permanent solution is to include this additional plugin to my POM, which not just generates a manifest file, but KEEPS it at target/classes/META-INF/MANIFEST.MF:
...
<build>
<plugins>
<plugin>
<groupId>org.apache.felix</groupId>
<artifactId>maven-bundle-plugin</artifactId>
<version>3.3.0</version>
<executions>
<execution>
<id>bundle-manifest</id>
<phase>compile</phase>
<goals>
<goal>manifest</goal>
</goals>
</execution>
</executions>
<configuration>
<archive>
<index>true</index>
<manifest>
<addDefaultSpecificationEntries>false</addDefaultSpecificationEntries>
<addDefaultImplementationEntries>false</addDefaultImplementationEntries>
</manifest>
</archive>
</configuration>
</plugin>
<plugin>
<groupId>org.apache.maven.plugins</groupId>
<artifactId>maven-war-plugin</artifactId>
...
</plugin>
<plugin>
<groupId>org.apache.maven.plugins</groupId>
<artifactId>maven-compiler-plugin</artifactId>
...
</plugin>
<plugin>
<groupId>org.apache.maven.plugins</groupId>
<artifactId>maven-assembly-plugin</artifactId>
...
</plugin>
</plugins>
...
</build>
...

Having only a JAR Maven Archetype file, how can it be generated a new project?

I'm just starting with Maven 3 for an Scala project in IntelliJ.
I have generated a JAR file following this guide.
I moved archetype.jar to a directory in where I want to create a new project. But my questions are:
Is this file stand-alone? Is it enough? It does not work with the command "mvn archetype:generate"
Is it possible to use the jar file without the intervention of any repository? So I can share it with collegues.
What's the best method for this, I've been reseaching and all the guides are based on repositories only and not in working local. Even the local repositories only consists in xmls files with the id but not the contents.
This is a sort of complex question you are asking...I am going to try summarise what I know and let's see if it helps.
Answers to your questions:
1) If you have just the basic Maven Project structure after you have generated the archtype and so on, if you run maven clean install and the project produces a jar, this in theory should be immediately executable from the command line and standalone.
However, as you add dependencies to your small projects, not all dependencies are automatically built into the standalone jar, sometimes you have to tell maven to bundle them into it.
Maven Shade Plugin - adds all the needed dependencies into your jar
<build>
<plugins>
<plugin>
<groupId>org.apache.maven.plugins</groupId>
<artifactId>maven-compiler-plugin</artifactId>
<configuration>
<source>1.8</source>
<target>1.8</target>
</configuration>
</plugin>
<plugin>
<groupId>org.apache.maven.plugins</groupId>
<artifactId>maven-shade-plugin</artifactId>
<executions>
<execution>
<phase>package</phase>
<goals>
<goal>shade</goal>
</goals>
</execution>
</executions>
<configuration>
<transformers>
<transformer implementation="org.apache.maven.plugins.shade.resource.ManifestResourceTransformer">
<mainClass>MainApp</mainClass>
</transformer>
<transformer implementation="org.apache.maven.plugins.shade.resource.ServicesResourceTransformer"/>
</transformers>
<shadedArtifactAttached>true</shadedArtifactAttached>
<shadedClassifierName>launcher</shadedClassifierName>
</configuration>
</plugin>
</plugins>
</build>
2) You do not need to integrate to any repository, its recommended for wider projects so that you can publish artifacts to your firms Repo for eas of use between developers
3) The easiest method is to create a new project in Intellij itself specifying Maven as the project type and that will give you the default project structure. In the pom file you then specify the build block I pasted above and you are essentially good to go...If you need Dependencies also t run your own code you will need to add them in a Dependencies block.
So, I finally used the following command before generating:
mvn install:install-file -Dfile=<path-to-jar-archetype-file> -DgroupId=<groupId> -DartifactId=<artifactId> -Dversion=<version> -Dpackaging=jar
After executing the command, the jar is installed in your local repo. You can generate the project with for instance IntelliJ or go to the path where you want to generate the project and...
mvn archetype:generate

Eclipse overwrites manifest created by maven bundle plugin

I'm using maven-bundle-plugin to generate MANIFEST.MF for OSGi container.
<build>
<plugins>
<plugin>
<groupId>org.apache.felix</groupId>
<artifactId>maven-bundle-plugin</artifactId>
<extensions>true</extensions>
<configuration>
<instructions>
<Export-Package>com.example.mypackage</Export-Package>
</instructions>
</configuration>
<executions>
<execution>
<id>bundle-manifest</id>
<phase>process-classes</phase>
<goals>
<goal>manifest</goal>
</goals>
</execution>
</executions>
</plugin>
</plugins>
</build>
However, that manifest file got destroyed (overwritten) by Eclipse (4.6.1 Neon) after, f.g Maven/Update Project or Clean/Build.
Is it possible to make Eclipse somehow aware of the maven plugins, and not destroy their output? What should I setup to prevent that (mis)behaviour?
If that issue is not to be fixed with Eclipse, does it work better with IntelliJ, for example? OSGi support within IDE is quite important for me...
I have to change my answer. I missed the part that you define the goal manifest. This is the new and recommended way to use the maven bundle plguin but it requires that you tell the jar plugin to use the existing Manifest.
<plugin>
<groupId>org.apache.maven.plugins</groupId>
<artifactId>maven-jar-plugin</artifactId>
<version>2.5</version>
<configuration>
<archive>
<manifestFile>${project.build.outputDirectory}/META-INF/MANIFEST.MF</manifestFile>
</archive>
</configuration>
</plugin>
old answer
I suspect you are using the Eclipse PDE. The PDE is always working Manifest first. This means it is incompatible with the maven-bundle-plugin.
I recommend to use a plain maven build which we use a lot at apache projects like Apache Karaf or Apache Aries. It lacks the special OSGi support of Eclipse PDE but this sucks anyway.
You can augment this by using the eclipse plugin bndtools. Bndtools now provides maven support to a degree. This means you can now provide maven based OBR indexes for your project and define which bundles to start in a bndrun file. This allows to directly start and debug your OSGi project in Eclipse. See the osgi-chat example on how to do it.
Beware though that bndtools just started with maven support recently. So the current version 3.3.0 still lacks some of the convenience for maven builds.
With my configuration:
<plugin>
<groupId>org.apache.felix</groupId>
<artifactId>maven-bundle-plugin</artifactId>
<version>3.3.0</version>
<extensions>true</extensions>
<configuration>
<manifestLocation>src/main/resources/META-INF</manifestLocation>
<rebuildBundle>true</rebuildBundle>
<instructions>
<Bundle-SymbolicName>${project.artifactId};singleton:=true</Bundle-SymbolicName>
</instructions>
</configuration>
</plugin>
And the Plugins installed:
m2e Connector: http://download.eclipse.org/m2e-wtp/releases/neon/
BND Tools: http://bndtools.org/
The Eclipse build finally didn't destroy the manifest file. But there were some iterations(maven build, Update Maven Dependencies, Eclipse Build, maven build) necessary. Also beforehand, I deleted all project related settings on the filesystem: .classpath, .project, .factorypath, .settings, .apt_generated, target. Hope that helps.

Eclipse javadoc: The type package-info is already defined

OS: Windows 7 x64
Eclipse Platform: 3.7.2.M20120208
m2e: 1.0.200.20111228-1245
Have similar problem as in this bug.
There is a bunch of package-info.java files in /src and /test folders, so they have same package. Eclipse show error:
"The type **package-info** is already defined"
I can delete package-info.java files either in /test or /src to avoid problem indication. But this workaround is not very comfort since I am using SCM and need to delete this files all time after update.
Same for Eclipse Platform 4.2.0.I20120608-1400
You can do this -->
Go to Build path -> configure build path -->
in Source tab -->
select the package (in which you have these problematic package-info.java file)
for eg. project-name/src/test/java
click on exclude -> and in exclusion pattern add "**/package-info.java"
this should solve the problem, as plainly you are asking eclipse to exclude these files, and thus you wouldn't have to delete those files and solving your SCM related issues
There are a few options to solve this:
Move away from package-info.java files, and replace them with package.html files.
Only have package-info.java files in the src/ tree, as the same-named packages in the test/ tree will "overlap" the src/ tree.
Generate javadoc separately for the src/ and test/ trees, as they are probably for different audiences.
If you use maven and m2e for interaction between eclipse and maven. There is a quite clean solution: add a profile to pom.xml that is activated only by m2e and prevents compilation of package-info.java in the test-compile phase. Here a sample :
<profile>
<id>m2e</id><!--This profile is activated when eclipse interacts with maven (using m2e).-->
<activation>
<property>
<name>m2e.version</name>
</property>
</activation>
<build>
<plugins>
<plugin>
<!--eclipse do not support duplicated package-info.java, in both src and test.-->
<artifactId>maven-compiler-plugin</artifactId>
<executions>
<execution>
<id>default-testCompile</id>
<phase>test-compile</phase>
<configuration>
<testExcludes>
<exclude>**/package-info.java</exclude>
</testExcludes>
</configuration>
<goals>
<goal>testCompile</goal>
</goals>
</execution>
</executions>
</plugin>
</plugins>
</build>
</profile>

How do I get Eclipse to resolve classes generated with Maven 2?

I'm using Google Protocol Buffers to generate some Java classes for my project. Using Maven 2 and its "antrun" plugin, these classes are freshly generated before compile, output to target/generated-sources and put on the classpath during the build. So building the project from the POM is no problem.
However, Eclipse doesn't know how to resolve the generated class, because the folder it's in doesn't seem to be on the IDE's classpath during development. I'm using m2eclipse and have it manage dependencies for me, so I had expected Maven to take care of this.
How can I get IDE support (code completion etc.) for the generated code?
m2eclipse supports this. First, add the path to your build path:
<plugin>
<groupId>org.codehaus.mojo</groupId>
<artifactId>build-helper-maven-plugin</artifactId>
<version>1.8</version>
<executions>
<execution>
<id>add-source</id>
<phase>generate-sources</phase>
<goals>
<goal>add-source</goal>
</goals>
<configuration>
<sources>
<source>${project.build.directory}/generated-sources/java/</source>
</sources>
</configuration>
</execution>
</executions>
</plugin>
Second, add support for that to m2e:
<pluginManagement>
<plugins>
<plugin>
<groupId>org.eclipse.m2e</groupId>
<artifactId>lifecycle-mapping</artifactId>
<version>1.0.0</version>
<configuration>
<lifecycleMappingMetadata>
<pluginExecutions>
<pluginExecution>
<pluginExecutionFilter>
<groupId>org.codehaus.mojo</groupId>
<artifactId>build-helper-maven-plugin</artifactId>
<versionRange>[1.0,)</versionRange>
<goals>
<goal>parse-version</goal>
<goal>add-source</goal>
<goal>maven-version</goal>
<goal>add-resource</goal>
<goal>add-test-resource</goal>
<goal>add-test-source</goal>
</goals>
</pluginExecutionFilter>
<action>
<execute>
<runOnConfiguration>true</runOnConfiguration>
<runOnIncremental>true</runOnIncremental>
</execute>
</action>
</pluginExecution>
</pluginExecutions>
</lifecycleMappingMetadata>
</configuration>
</plugin>
</plugins>
</pluginManagement>
The second step might not be necessary, if your eclipse installation has installed the "org.eclipse.m2e.discovery.lifecyclemapping.buildhelper.xml" plugin. This plugin is available via Window -> Preferences -> Maven -> Discovery. Currently, that does not work here at Eclipse Kepler, therefore, I fetched the JAR (linked from the xml shown in the Catalog URL) and extracted the fragments from org.eclipse.m2e.discovery.lifecyclemapping.buildhelper.xml by hand.
m2eclipse doesn't support this. You must manually add the folder target/generated-sources as a source folder. When you tell m2eclipse to "Update Project Configuration", this will be overwritten and you have to restore it.
Also, make sure that Eclipse looks for changes in the workspace.
There might be some issues, though. Eventually, you'll run into errors that some class can't be compiled because some other class can't be resolved. Code completion will work, though. The root cause of this issue is that Eclipse gets confused when Maven changes class files in target.
To solve this, you must tell Eclipse to compile to a different place than Maven.
What you should see in your project explorer is a container named "Maven Dependencies" in place of the usual "Referenced libraries". This means m2eclipse is managing your build path.
In my case, to achieve this, I checked "Include Modules" and unchecked "Skip Maven compiler plugin when processing resources" on the "Maven" section of Project->Properties.
Personally I resolved this problem by setting up the generated classes as a seperate project and made it a dependency in my main (non-generated) project. I was using wsdl2java to generate webservice classes so the "source" in my sub-project was the wdsl and xsds. Worked well even when the wsdl was changing regularly.
I had this issue with code generated using Maven and wsdl2java and here's what I did in Eclipse Juno to resolve it. Assume my project is named project1:
Right-click project1 and select Properties
Choose Java Build Path from the left and select the Libraries tab
Click Add Class Folder
Select the bin directory and click OK (project1/target/generated-sources/bin)
Click OK and Refresh the project
As an added bonus you can also attach the source code:
Click the arrow next to the new class folder you just created
Click on Source attachment
Click the Edit button
Set the Path to /project1/target/generated-sources/axis2/src
Click OK
Right-click project and select Properties
Choose Java Build Pathfrom the left and select the Source tab
Click Add Folder
Select the bin directory and click OK
(project/target/generated-sources/xxxx) Click OK and Refresh the project
How can I get IDE support (code completion etc.) for the generated code?
Typically I would add the m2e lifecycle-mapping plugin to the pom.xml file as described in #koppor's answer. However adding per-eclipse code to my pom.xml files is not an option at work which is mostly an IntelliJ shop.
My solution first adds the build-helper-maven-plugin to the pom.xml which works fine from the command line but not in eclipse.
<plugin>
<groupId>org.codehaus.mojo</groupId>
<artifactId>build-helper-maven-plugin</artifactId>
<executions>
<execution>
<phase>generate-sources</phase>
<goals>
<goal>add-source</goal>
</goals>
<configuration>
<sources>
<source>${project.build.directory}/generated-sources/</source>
</sources>
</configuration>
</execution>
</executions>
</plugin>
To fix eclipse I installed the Apt M2E Connector from the Eclipse Marketplace. I think things started working right after I restarted and then rebuilt all of my projects. I now see the following in my source dirs:
src/main/java
target/generated-sources
...
Feature!
Did you try to refresh the Eclipse project?
(source: oyvindhauge.com)
When an external tool generate new files or updates old ones, Eclipse will not be able to detect the change until the next request.
Another option would be to define a new Custom builder, specifying for that builder to "refresh resources upon completion":
alt text http://www.cs.lth.se/EDA180/2005/Verktyg/eclipse_refresh.gif
Worked for me (But you will to have to follow this every time so you can add this path in pom.xml)
Right click on your project > Build Path > Configure Build Path
In sources tag, click on [Add Folder] button
Check target/generated-sources/annotations
To generate Java source files from .proto files use Protocol Buffers Plugin which works out-of-the-box in eclipse Oxygen.
Basic usage (see here for detailed description):
make sure that native protoc compiler is installed on your system
update your pom.xml file:
make sure you use at least Java 6 (Java 7+ is recommended)
add plugin invocation
add the corresponding dependency for com.google.protobuf:protobuf-java
put your .proto files inside project's src/main/proto directory
update the project (via Maven -> Update project...)
Example pom.xml:
<project>
...
<build>
<plugins>
<!-- Require at least Java 6 -->
<plugin>
<groupId>org.apache.maven.plugins</groupId>
<artifactId>maven-compiler-plugin</artifactId>
<version>3.7.0</version>
<configuration>
<source>1.6</source>
<target>1.6</target>
</configuration>
</plugin>
<!-- Generate .java files from .proto definitions -->
<plugin>
<groupId>org.xolstice.maven.plugins</groupId>
<artifactId>protobuf-maven-plugin</artifactId>
<version>0.5.1</version>
<configuration>
<protocExecutable>/usr/local/bin/protoc</protocExecutable>
</configuration>
<executions>
<execution>
<goals>
<goal>compile</goal>
<goal>test-compile</goal>
</goals>
</execution>
</executions>
</plugin>
...
</plugins>
</build>
<dependencies>
<dependency>
<groupId>com.google.protobuf</groupId>
<artifactId>protobuf-java</artifactId>
<version>3.5.1</version>
</dependency>
...
</dependencies>
...
</project>
Some additional notes:
if protoc executable is in the PATH the protocExecutable configuration entry can be omitted
test-only protobuf message definitions can be put into project's src/test/proto directory
I recommend installing Protocol Buffer Descriptor Editor (marketplace link)
Good luck!