When I run deploy:setup and deploy:update I see embedded in the output (in multiple places)
*** [err :: domain.com] sudo
*** [err :: domain.com] :
*** [err :: domain.com] no tty present and no askpass program specified
*** [err :: domain.com]
Yet, everything deploys fine since I have :use_sudo, false.
What's wrong?
I had a similar message with :use_sudo, true. The solution was to add this to ~/.caprc:
default_run_options[:pty] = true
(Alternatively you can insert in the Capfile or config/deploy.rb)
It's not obvious why you're seeing the message, but I would hope the above technique would at least stop those messages appearing for you.
Related
I'm a totally fresh man in bioinformatics and this is my first time to ask for help in english language web. When I tried to install 'BioPerl' in my MacBookPro BigSur 11.5.2, something strange happened.
Firstly, when doing cpan install BioPerl, it failed and told to me that
one dependency not OK (Graph::Directed); additionally test harness failed
Secondly, I tried to install Graph::Directed, and ...
Result: FAIL
Failed 63/84 test programs. 11/740 subtests failed.
make: *** [test_dynamic] Error 255
ETJ/Graph-0.9724.tar.gz
one dependency not OK (Set::Object); additionally test harness failed
/usr/bin/make test -- NOT OK
//hint// to see the cpan-testers results for installing this module, try:
reports ETJ/Graph-0.9724.tar.gz
Thirdly, I installed Set::Object, this failed again...
cc -c -g -pipe -fno-strict-aliasing -fstack-protector-strong -DPERL_USE_SAFE_PUTENV -Os -DVERSION=\"1.41\" -DXS_VERSION=\"1.41\" -iwithsysroot "/System/Library/Perl/5.30/darwin-thread-multi-2level/CORE" Object.c
Object.xs:5:10: fatal error: 'EXTERN.h' file not found
#include "EXTERN.h"
^~~~~~~~~~
1 error generated.
make: *** [Object.o] Error 1
RURBAN/Set-Object-1.41.tar.gz
/usr/bin/make -- NOT OK
After that, I find some answers ("Fatal error: 'EXTERN.h' file not found" while installing Perl modules1) but not work, my perl is 5.30.2 (result of 'perl -v' in terminal) while '/Library/Developer/CommandLineTools/SDKs' just including 'MacOSX10.14.sdk' and 'MacOSX10.15.sdk' (no 'MacOSX11sdk') and when I use
find /Library/Developer/CommandLineTools -name EXTERN.h
/Library/Developer/CommandLineTools/SDKs/MacOSX10.14.sdk/System/Library/Perl/5.18/darwin-thread-multi-2level/CORE/EXTERN.h
/Library/Developer/CommandLineTools/SDKs/MacOSX10.15.sdk/System/Library/Perl/5.28/darwin-thread-multi-2level/CORE/EXTERN.h
/Library/Developer/CommandLineTools/SDKs/MacOSX10.15.sdk/System/Library/Perl/5.18/darwin-thread-multi-2level/CORE/EXTERN.h
Versions in my Mac maybe in chaos? so I have no idea to solve this question now. That is very upsetting to a new man but I will never give up...
After the failure of all the above, I look for perl 5.30.2 file, and it is in "usr/perl" and "sys/lib", compared with which i "find"(sys/lib/developer/), the "CORE" file is empty and cannot be edited (I want to copy the absent file from 5.28 but failed and does not work). That is the results to those errors. While, I cannot fix it...
I was trying to get my hands dirty with SLAM and I started with ORB-SLAM2 library.
I have downloaded a TUM sequence and wanted to use ROS for it. So I am following the steps according this page.
In Step 7, part 2, when i run ./build_ros.sh, I get the following error:
In file included from /home/sarvagya/Desktop/Swaayatt/ORB_SLAM2/Examples/ROS/ORB_SLAM2/../../../Thirdparty/g2o/g2o/types/../core/optimizable_graph.h:41:0,
from /home/sarvagya/Desktop/Swaayatt/ORB_SLAM2/Examples/ROS/ORB_SLAM2/../../../Thirdparty/g2o/g2o/types/../core/base_vertex.h:30,
from /home/sarvagya/Desktop/Swaayatt/ORB_SLAM2/Examples/ROS/ORB_SLAM2/../../../Thirdparty/g2o/g2o/types/types_seven_dof_expmap.h:34,
from /home/sarvagya/Desktop/Swaayatt/ORB_SLAM2/Examples/ROS/ORB_SLAM2/../../../include/LoopClosing.h:34,
from /home/sarvagya/Desktop/Swaayatt/ORB_SLAM2/Examples/ROS/ORB_SLAM2/../../../include/LocalMapping.h:26,
from /home/sarvagya/Desktop/Swaayatt/ORB_SLAM2/Examples/ROS/ORB_SLAM2/../../../include/Tracking.h:31,
from /home/sarvagya/Desktop/Swaayatt/ORB_SLAM2/Examples/ROS/ORB_SLAM2/../../../include/System.h:29,
from /home/sarvagya/Desktop/Swaayatt/ORB_SLAM2/Examples/ROS/ORB_SLAM2/src/AR/ViewerAR.h:29,
from /home/sarvagya/Desktop/Swaayatt/ORB_SLAM2/Examples/ROS/ORB_SLAM2/src/AR/ViewerAR.cc:21:
/home/sarvagya/Desktop/Swaayatt/ORB_SLAM2/Examples/ROS/ORB_SLAM2/../../../Thirdparty/g2o/g2o/types/../core/jacobian_workspace.h:36:24: fatal error: g2o/config.h: No such file or directory
compilation terminated.
CMakeFiles/MonoAR.dir/build.make:198: recipe for target 'CMakeFiles/MonoAR.dir/src/AR/ViewerAR.cc.o' failed
make[2]: *** [CMakeFiles/MonoAR.dir/src/AR/ViewerAR.cc.o] Error 1
make[2]: *** Waiting for unfinished jobs....
I went and checked the g2o folder and there is a file by name config.h.
So why am I still getting the error?
In the CMakeLists.txt in /home/sarvagya/Desktop/Swaayatt/ORB_SLAM2/Examples/ROS/ORB_SLAM2/
Try adding
${PROJECT_SOURCE_DIR}/../../../Thirdparty
to the list of include_directories() at line 44 (it should be at that line if you did not change the file)
Adding this line tells the cmake where to find the g2o/config.h.
From the information, that missing g2o/config.h in jacobian_workspace.h, but when I look into the file, and do not find the include in line 36. Do I miss something, or you change something?
I have imported my project in svn when I did a checkout and ran the app I got this error I am using sailsjs-0.10.5. I think it is to do with the grunt I am not able to find any solution it works fine in mac not in linux I set the permissin to 0777 even though it is not working here is the error.
verbose: Grunt :: Loading "Gruntfile.js" tasks...
verbose: Grunt :: ERROR
verbose: Grunt :: >> TypeError: Property '.svn' of object # is not a function
verbose: Grunt :: Warning: Task "default" not found.
error: ** Grunt :: An error occurred. **
error:
Aborted due to warnings.
Loading "Gruntfile.js" tasks...ERROR
TypeError: Property '.svn' of object # is not a function
Warning: Task "default" not found.
error: Looks like a Grunt error occurred--
error: Please fix it, then restart Sails to continue running tasks (e.g. watching for changes in assets)
error: Or if you're stuck, check out the troubleshooting tips below.
error: Troubleshooting tips:
error:
error: *-> Are "grunt" and related grunt task modules installed locally? Run npm install if you're not sure.
error:
error: *-> You might have a malformed LESS, SASS, CoffeeScript file, etc.
error:
error: *-> Or maybe you don't have permissions to access the .tmp directory?
error: e.g., /var/hosts/chating_room/.tmp ?
error:
error: If you think this might be the case, try running:
error: sudo chown -R YOUR_COMPUTER_USER_NAME /var/hosts/chating_room/.tmp
Make changes to Gruntfile.js, find loadTasks function, add excludeDirs : /^\.(git|svn)$/:
Original:
function loadTasks(relPath) {
return includeAll({
dirname: require('path').resolve(__dirname, relPath),
filter: /(.+)\.js$/
}) || {};
}
After:
function loadTasks(relPath) {
return includeAll({
dirname: require('path').resolve(__dirname, relPath),
filter: /(.+)\.js$/,
excludeDirs : /^\.(git|svn)$/
}) || {};
}
I have a same problem.
FIXED by
Simply deleting .svn folder from
1) task/.svn,
2) config/.svn &
3) register/.svn
I've made a new Rails 3.2 application. When i deploy it with Capistrano, I get an error when compiling assets. But the assets ARE compiled, and the application deployed as it should.
On the server I've installed RVM systemwide and then created:
User: skolemapicture (added to group rvm)
Deploy folder: /home/skolemapicture/site
.rvmrc in /home/skolemapicture/site/.rvmrc
My deploy.rb config looks like this (omitted lines that have nothing to do with the problem)
set :application, "skolemapicture"
set :deploy_to , "/home/skolemapicture/site"
set :user , "skolemapicture"
set :use_sudo , false
ssh_options[:forward_agent] = true
require "bundler/capistrano"
require "rvm/capistrano"
set(:ruby_version) { '1.9.3' }
set(:rvm_ruby_string) { "#{ruby_version}##{application}" }
set(:rvm_path) { "/usr/local/rvm" }
set(:rvm_type) { :system }
namespace :deploy do
task :precompile, :role => :app do
run "cd #{release_path}/ && bundle exec rake assets:precompile"
end
end
after "deploy:finalize_update", "deploy:precompile"
The error i get at "cap deploy" is:
* 2013-02-13 10:36:21 executing `deploy:precompile'
* executing "cd /home/skolemapicture/site/releases/20130213093619/ && bundle exec rake assets:precompile"
servers: ["web01.mapicture.com"]
[web01.mapicture.com] executing command
*** [err :: web01.mapicture.com] /usr/local/rvm/rubies/ruby-1.9.3-p374/bin/ruby /home/skolemapicture/site/shared/bundle/ruby/1.9.1/bin/rake assets:precompile:all RAILS_ENV=production RAILS_GROUPS=assets
*** [err :: web01.mapicture.com]
But the assets ARE compiled. So why this error?
/ Carsten
It is probably actually precompiling the assets successfully with your custom deploy:precompile task.
It is failing on the capistrano default assets:precompile task.
You will notice that the failed command is
/usr/local/rvm/rubies/ruby-1.9.3-p374/bin/ruby /home/skolemapicture/site/shared/bundle/ruby/1.9.1/bin/rake assets:precompile:all RAILS_ENV=production RAILS_GROUPS=assets
not your custom precompile task:
cd #{release_path}/ && bundle exec rake assets:precompile
Try removing your deploy:precompile task and adding
load 'deploy/assets'
to your Capfile if it is not already there.
If that doesn't fix it can you post your entire Capfile and deploy.rb?
Yesterday I made my 40th or 50th deployment of a Symfony2 system on a server. Everything fine so far. Today I get a nasty error. This is what happens:
* executing `symfony:cache:warmup'
* executing "cd /NFS2/oa_sf2/releases/20111214182506 && php app/console cache:warmup --env=prod"
servers: ["151.1.111.19"]
[151.1.111.19] executing command
** [out :: 151.1.111.19] Warming up the cache
** [out :: 151.1.111.19]
** [out :: 151.1.111.19]
** [out :: 151.1.111.19]
** [out :: 151.1.111.19] [RuntimeException]
** [out :: 151.1.111.19] Error creating output file.
** [out :: 151.1.111.19]
** [out :: 151.1.111.19]
** [out :: 151.1.111.19]
** [out :: 151.1.111.19] cache:warmup
** [out :: 151.1.111.19]
** [out :: 151.1.111.19]
command finished
*** [deploy:update_code] rolling back
No chance for further investigation into the cache folder because the whole code tree gets removed on rollback
We know Capistrano features some way to disable the rollback but still we'd like to try understanding with no access on remote server - it must be something on our side, since yesterday it was all OK
No change was made on the deployment user's read/write/execute rights
Please any suggestion on how to bring investigation forward?
Thanks a lot.
p.s. no similar question on Stacktrace addresses this peculiar issue.
I think it's not really a Capifony related question. In the end it only runs the Symfony command.
First try running cache:warmup task manually on the server.
It might be a permissions problem. Check what are the rights to the cache directory just before the warmup. You can do that by overwriting the task (just copy it and run ls -l on the cache directory before running an actual command).
You don't have to deploy every time to see what's wrong. Run cache:warmup command itself:
cap symfony:cache:warmup
I greped Symfony 2.0.7 sources and the assetic's YUI compressor is the only place where such exception is thrown (see link). This suggests it's a problem related to compressing your assets with assetic. Might be you added this feature recently and don't have java installed on the server.
Disk full? Maybe it gets full once it tries to warmup the cache.
The cache warming is a symfony task AFAIU, it can be inspected through XDebug or its profiler.