I'm reading DICOM series using itk and converting them into VTK for visualization purposes. Even though I manage to visualize DICOM series in 3 different windows with 3 different orientations (XY, XZ and YZ) I can't even click on the windows. When I click or try to change the slice viewed, my code gives an access violation error. I'm using ImageViewer2 to visualize the slices. A file called itkVTKImageExportBase.cxx is opened when I try to find out what the error is. The lines referred to are:
void VTKImageExportBase::UpdateInformationCallbackFunction(void* userData)
{
static_cast<VTKImageExportBase*>
(userData)->UpdateInformationCallback();
}
My code is as follows:
typedef itk::VTKImageExport< ImageType > ExportFilterType;
ExportFilterType::Pointer itkExporter = ExportFilterType::New();
itkExporter->SetInput( reader->GetOutput() );
// Create the vtkImageImport and connect it to the itk::VTKImageExport instance.
vtkImageImport* vtkImporter = vtkImageImport::New();
ConnectPipelines(itkExporter, vtkImporter);
pViewerXY->SetInput(vtkImporter->GetOutput());
pViewerXY->SetSlice(3);
pViewerXY->SetSliceOrientationToXY();
pViewerXY->SetupInteractor(m_pVTKWindow_1);
pViewerXY->UpdateDisplayExtent();
m_pVTKWindow_1->AddObserver(vtkCommand::KeyPressEvent, m_pVTKWindow_1_CallbackCommand);
m_pVTKWindow_1->Update();
pViewerXZ->SetInput (vtkImporter->GetOutput());
pViewerXZ->SetSliceOrientationToXZ();
pViewerXZ->SetupInteractor(m_pVTKWindow_2);
pViewerXZ->UpdateDisplayExtent();
m_pVTKWindow_2->AddObserver(vtkCommand::KeyPressEvent, m_pVTKWindow_2_CallbackCommand);
m_pVTKWindow_2->Update();
pViewerYZ->SetInput (vtkImporter->GetOutput());
pViewerYZ->SetSliceOrientationToYZ();
pViewerYZ->SetupInteractor(m_pVTKWindow_3);
pViewerYZ->UpdateDisplayExtent();
m_pVTKWindow_3->AddObserver(vtkCommand::KeyPressEvent, m_pVTKWindow_3_CallbackCommand);
m_pVTKWindow_3->Update();
pViewerXX windows are imageviewer2 objects whereas m_pVTKWindow_X refers to wxVTK objects to use in wxWidgets GUI package.
Optional: My exporter and importer are as given below:
template <typename ITK_Exporter, typename VTK_Importer>
void ConnectPipelines(ITK_Exporter exporter, VTK_Importer* importer)
{
importer->SetUpdateInformationCallback(exporter->GetUpdateInformationCallback());
importer->SetPipelineModifiedCallback(exporter->GetPipelineModifiedCallback());
importer->SetWholeExtentCallback(exporter->GetWholeExtentCallback());
importer->SetSpacingCallback(exporter->GetSpacingCallback());
importer->SetOriginCallback(exporter->GetOriginCallback());
importer->SetScalarTypeCallback(exporter->GetScalarTypeCallback());
importer->SetNumberOfComponentsCallback(exporter->GetNumberOfComponentsCallback());
importer->SetPropagateUpdateExtentCallback(exporter->GetPropagateUpdateExtentCallback());
importer->SetUpdateDataCallback(exporter->GetUpdateDataCallback());
importer->SetDataExtentCallback(exporter->GetDataExtentCallback());
importer->SetBufferPointerCallback(exporter->GetBufferPointerCallback());
importer->SetCallbackUserData(exporter->GetCallbackUserData());
}
/**
* This function will connect the given vtkImageExport filter to
* the given itk::VTKImageImport filter.
*/
template <typename VTK_Exporter, typename ITK_Importer>
void ConnectPipelines(VTK_Exporter* exporter, ITK_Importer importer)
{
importer->SetUpdateInformationCallback(exporter->GetUpdateInformationCallback());
importer->SetPipelineModifiedCallback(exporter->GetPipelineModifiedCallback());
importer->SetWholeExtentCallback(exporter->GetWholeExtentCallback());
importer->SetSpacingCallback(exporter->GetSpacingCallback());
importer->SetOriginCallback(exporter->GetOriginCallback());
importer->SetScalarTypeCallback(exporter->GetScalarTypeCallback());
importer->SetNumberOfComponentsCallback(exporter->GetNumberOfComponentsCallback());
importer->SetPropagateUpdateExtentCallback(exporter->GetPropagateUpdateExtentCallback());
importer->SetUpdateDataCallback(exporter->GetUpdateDataCallback());
importer->SetDataExtentCallback(exporter->GetDataExtentCallback());
importer->SetBufferPointerCallback(exporter->GetBufferPointerCallback());
importer->SetCallbackUserData(exporter->GetCallbackUserData());
}
I don't have an exact answer to your question, but have you considered using one of the common medical image processing frameworks? There are a couple of them like MITK (mitk.org) or Slicer3D (slicer.org). They do a great job of linking together ITK, VTK and a sophisticated GUI Framework like QT (in the MITK case).
I have worked a long time in medical image processing and used MITK extensively. In my opinion, using a medical image processing framework really helps you focus on your real image processing problems, rather than trying to build processing/visualization pipelines for different types of visualizations.
If you look at InsightApplications, there are two methods:
The same as you tried, which is here, or
This one, which creates a pipeline object that can be connected on both sides. We're actually using this, and it works out quite well for us. You can copy this class into your code and use it.
There are some interesting usage examples in there too. Take a look at them and see if you can modify anything for your requirement.
Classes in the ITKVTkGlue module can be used to convert an ITK image to in a pipeline. See the tests for examples of how the classes are applied.
Related
I am trying to learn game development through different ways and sources and recently I have created a project in unity with example ThirdPersonController.
While looking through the code I came across one thing which I am finding difficult to wrap my mind around. It is "StringToHash". What is the purpose of this? Here is an example of variable with specified values set:
private void AssignAnimationIDs()
{
_animIDSpeed = Animator.StringToHash("Speed");
_animIDGrounded = Animator.StringToHash("Grounded");
_animIDJump = Animator.StringToHash("Jump");
_animIDFreeFall = Animator.StringToHash("FreeFall");
_animIDMotionSpeed = Animator.StringToHash("MotionSpeed");
}
and here is an example when this is used when being called:
if (_hasAnimator)
{
_animator.SetFloat(_animIDSpeed, _animationBlend);
_animator.SetFloat(_animIDMotionSpeed, inputMagnitude);
}
Welcome to Stack overflow.
Similar question already has been asked HERE . Unity Docs .
In your code below you changing values (parameters) of your animator. To find which values it should change it must compare the name of the value you gave in .SetFloat to the ones it has (in "parameters" section on "animator" tab).
You could do
.SetFloat("speed", _animationBlend);
But to get that milliseconds of time advantage (optimization) your "speed" is converted to integers first (like in your code above) and then you use it.
I'm developing an application for an nRF52 SoC to access some external devices, kind of detectors in this case, so I have defined a custom format (and its corresponding yaml file) for my device access description node. It is kind of:
n: detectors {
compatible = "foo-detectors";
// Definition of first channel
det0: det_0 {
irq-pins = <13 (GPIO_PULL_UP | GPIO_ACTIVE_LOW)>;
label = "Bar detector channel 1";
};
// Definition of second channel
det1: det_1 {
irq-pins = <17 (GPIO_PULL_UP | GPIO_ACTIVE_LOW)>;
label = "Bar detector channel 2";
};
};
Suppose I have a structure definition for holding data about the pins to which those devices are physically connected, say:
struct foo_detector_desc {
int irqpin;
int irqpin_flags;
}
Using Zephyr macros, I can use from my code the individual values for those nodes. For instance, DT_PROP_BY_IDX(DT_NODELABEL(det0), irq_pins, 0) expands to 13, DT_PROP_BY_IDX(DT_NODELABEL(det0), irq_pins, 1) expands to the value of OR'ed flags GPIO_PULL_UP | GPIO_ACTIVE_LOW.
But I don't want to create a ten-page code full of conditionals in the form DT_NODE_EXISTS(DT_ALIAS(det#)), but something more compact, flexible and maintainable.
I came across Zephyr macro DT_FOREACH_CHILD that is intended for being used in that scenario with which I can create a list with the labels, as showcased in the example embedded in the documentation:
#define LABEL_AND_COMMA(node_id) DT_LABEL(node_id),
const char *child_labels[] = {
DT_FOREACH_CHILD(DT_NODELABEL(n), LABEL_AND_COMMA)
};
Trying to use that for filling a static structures array, I tried following code but, yet it expands to two elements in the array, the structure fields are not initialised with desired values.
#define PIN_INFO_AND_COMMA(node_id) \
{ \
.pin=DT_PROP_BY_IDX(node_id, irq_pins, 0),\
.flags=DT_PROP_BY_IDX(node_id, irq_pins, 1),\
},
const struct detector_data _det_data[] = {
DT_FOREACH_CHILD(DT_NODELABEL(n), PIN_INFO_AND_COMMA)
};
I'm using Visual Studio Code with the nRF Connect plugin.
Is there a way to generate/see how those macros expand when compiled?
What is the correct way for initialising the structure fields (pins, flags)?
BR
It is possible to expand the macros one level at a time in VS Code. It is needed to click over the macro, then select it by double-clicking on it, and a bulb light will, eventually, show up. The option Insert Macro will replace the macro with its expansion.
Regarding using the DTS in code, the code I wrote in my previous post is OK, but I think I found a bug in the debugger. If I don't include any code using the value of _det_data, the debugger doesn't say the constant was optimised-out and displays wrong values when inspecting its content. That made me waste a lot of time.
For anyone interested on using DTS files for nRF devices in Zephyr, I posted all details in a thread in Nordic's developers forum (here).
BR
I am a student who begin to study SHOP2 from China.
My teacher told me to run JSHOP2 in Eclipse.Now I can run original zenotravel problem and generate GUI and plans.Likewise, I want to put other domain and problems to SHOP2 and produce plans.
But the problem is that I don't know how to compile them and My teacher only asked me to run the the main function in Internaldomain but it can't succeed.Follow is the original code:
public static void main(String[] args) throws Exception
{
//compile();
// compile(args);
//-- run the planning algorithm
run(args);
}
This code can run zenotravel.Then I put domain and problems named pfile1 and
tdepots respectively into SHOP2 folder.Change the codes to:
{
compile(domaintdepots);
// compile(args);
//-- run the planning algorithm
run(args);
}
It warns "domainpdfiles cannot be resolved to a variable".
Or
//--compile();
compile(args);
//-- run the planning algorithm
//run(args);
It turns out:
"Exception in thread "main" java.lang.ArrayIndexOutOfBoundsException: 0
at JSHOP2.InternalDomain.compile(InternalDomain.java:748)
at JSHOP2.InternalDomain.main(InternalDomain.java:720)"
720 is main funcition above.And 748 is compile function:
public static void compile(String[] args) throws Exception
{
//-- The number of solution plans to be returned.
int planNo = -1;
//-- Handle the number of solution plans the user wants to be returned.
if (args.length == 2 || args[0].substring(0, 2).equals("-r")) {
if (args[0].equals("-r"))
planNo = 1;
else if (args[0].equals("-ra"))
planNo = Integer.MAX_VALUE;
else try {
planNo = Integer.parseInt(args[0].substring(2));
} catch (NumberFormatException e) {
}
}
Finally,according to the advice of the friend,I put the two pddls into src folder and use “java Jshop2.InternalDomain domaintdepots”in CMD commad but an error appeared:"the main class Interdomain can't be found or loaded".But I have set the class path accurately and the Zenotravel planning can run.So how
and where can I use the command ？
And what is written in the bracket"compile()" in Eclipse？
I am also not familiar with JAVA so it's better if there is concrete instruction.Thanks a lot.
Please describe what are you trying to build, what is it supposed to do, what is the expected end result.
If you do have a valid PDDL domain and problem file, you could try to load them into the online http://editor.planning.domains/ editor using the File > Load menu. Then press the Solve button and confirm which of the file is the domain and which is problem. If the PDDL model is valid (and the underlying solver can handle the requirements), you will get a plan back.
If you are trying to build a software solution that needs a PDDL-based planning engine as one of its component, perhaps you could use one of the available implementations: https://nergmada.github.io/pddl-reference/guide/whatisplanner.html#list-of-planners
If you are trying to build your own planning engine in Java using the Eclipse IDE, you probably need a Java-based PDDL parser. Here is a tutorial, how to use pddl4j for that purpose:
https://github.com/pellierd/pddl4j/wiki/A-tutorial-to-develop-your-own-planner
If you need to use Jshop2 in particular, it looks from their documentation (http://www.cs.umd.edu/projects/shop/description.html) that you need to indeed compile the domain and problem PDDL into Java code using following commands:
java JSHOP2.InternalDomain domainFileName
java JSHOP2.InternalDomain -r problemFileName
Edited on June 19th
Java package names (e.g. JSHOP2) and class names (InternalDomain) are case sensitive, so make sure you type them as per the documentation. That is probably why you are getting the "main class not found error".
It is difficult to say what the lines numbers 748 and 720 exactly correspond to, because in the GitHub repo https://github.com/mas-group/jshop2/blob/master/src/JSHOP2/InternalDomain.java the code is different from yours. Can you indicate in your questions which lines those are exactly?
The make file shows how to execute an out-of-the-box example in the distribution:
cd examples\blocks
java JSHOP2.InternalDomain blocks
java JSHOP2.InternalDomain -r problem300
Does that work for you?
Please excuse me if I use incorrect terms or concepts. Seems I am in the mist of a crash course on MS Project, Project Server, and the PSI...
Project Professional provides the Resource Usage view that lists a given Resource, the Tasks they have been assigned to, and the amount of scheduled Work for a given day.
Is this information available in Project Server and how would I read it using the PSI?
Thanks.
Jason
If you're just getting started with PSI, I'd strongly recommend downloading and using the ProjTool app that is part of the Project 2007 SDK.
I haven't done too much work with Resources, but after taking a quick look.. here is how I'd approach it:
Reference the Project.asmx service (ex: http://servername/pwa/_vti_bin/psi/Project.asmx)
Use the ReadProjectEntities method to retrieve a DataSet and pass it a ProjectEntityType of Task, Assignment and Resource.
Define some entity types:
public const int ENT_TYPE_TASK = 2;
public const int ENT_TYPE_RESOURCE = 4;
public const int ENT_TYPE_ASSIGNMENT = 8;
Then you can read the data:
int entity = ENT_TYPE_TASK | ENT_TYPE_ASSIGNMENT | ENT_TYPE_RESOURCE;
ProjectDataSet dataSet = project.ReadProjectEntities(projectUid, entity, DataStoreEnum.PublishedStore);
// do stuff with these tables...
//dataSet.Task
//dataSet.Assignment
//dataSet.ProjectResource
ReadProjectEntities is nice because you can read only the part of the project you need... if you need more than the Task table then you can use a logical OR to get additional ProjectEntityTypes.
As for the assigned work, it looks like that is also in the Assignment table, but I think you'll have to do some calculating.
Is it possible to get access to "internal" links in PDF documents using CGPDFDocument, or other means? I'm building a simple reader app and would like to deliver my content in PDF form, but if I can't support links between pages in the doc this probably isn't going to work.
This question is similar, but does not address the issue of how to support hyperlinks.
See my answer here. Basically, you'll need to get familiar with PDF link annotations.
see this sample code...pdf hyperlinks works in this
https://github.com/vfr/Reader
If you're using Quartz to open and view a PDF, then yes, it looks like you will have access to internal links. Quartz will also let you add new links to PDFs. I don't have any first hand experience with iPhone/Mac development, but it would be quite strange for them to let you add hyperlinks, but not use them.
You need to do in two steps.
First: Parse your pdf to locate marked content operators
That's an exemple of a parsing code :
-(void)parseContent() {
CGPDFOperatorTableRef myTable;
myTable = CGPDFOperatorTableCreate();
CGPDFOperatorTableSetCallback(myTable, "BMC", &myOperator_BMC);
CGPDFContentStreamRef myContentStream = CGPDFContentStreamCreateWithPage(page);
CGPDFScannerRef myScanner = CGPDFScannerCreate(myContentStream, myTable, autoZoomAreas);
CGPDFScannerScan(myScanner);
CGPDFScannerRelease(myScanner);
CGPDFContentStreamRelease(myContentStream);
}
void myOperator_BMC(CGPDFScannerRef s, void *info)
{
const char *name;
CGPDFScannerPopName(s, &name);
}
(You need to complete and adjust this code to match your requirement)
Second: respond to the toucheEnded message to handle tap on those zones and make the UI respond accordingly.