OSGI service JPA PersistenceContext not injected - jpa

I have a core library that has an interface that I want to expose as an OSGI service in Fuse ESB (Apache ServiceMix and Karaf). The goal is to allow other bundles to use it. The service uses JPA (OpenJPA) and Spring. The following is the interface:
public interface PatientService {
public Patient find(Integer id);
}
and the class:
#Repository
public class PatientServiceJpaImpl implements PatientService {
#PersistenceContext(unitName="psu")
private EntityManager entityManager;
#Override
public Patient find(Integer id) {
return entityManager.find(Patient.class, id);
}
}
The following is an abbreviated META-INF/spring/beans.xml:
<beans xmlns="http://www.springframework.org/schema/beans" ...>
<context:annotation-config />
<context:component-scan base-package="..." />
<bean id="txManager" class="org.springframework.orm.jpa.JpaTransactionManager">
<property name="entityManagerFactory" ref="emf" />
</bean>
<bean id="emf" class="org.springframework.orm.jpa.LocalContainerEntityManagerFactoryBean">
<property name="persistenceUnitName" value="psu" />
<property name="jpaVendorAdapter" ref="jpaAdapter" />
<property name="dataSource" ref="dataSource" />
</bean>
<bean id="jpaAdapter" class="org.springframework.orm.jpa.vendor.OpenJpaVendorAdapter" />
<bean id="dataSource" class="org.apache.commons.dbcp.BasicDataSource" destroy-method="close">
<property name="driverClassName" value="${database.driver}" />
<property name="url" value="${database.url}" />
<property name="username" value="${database.username}" />
<property name="password" value="${database.password}" />
</bean>
<bean class="org.springframework.dao.annotation.PersistenceExceptionTranslationPostProcessor"/>
<bean class="org.springframework.orm.jpa.support.PersistenceAnnotationBeanPostProcessor" />
</beans>
And the META-INF/persistence.xml (also abbreviated):
<persistence xmlns="http://java.sun.com/xml/ns/persistence" ...>
<persistence-unit name="psu" transaction-type="RESOURCE_LOCAL">
<class>...</class>
</persistence>
In a non-OSGi environment, everything works great. It uses the felix maven-bundle-plugin, so to create the OSGi service, I added the following OSGI-INF/blueprint/osgi-context.xml:
<blueprint xmlns="http://www.osgi.org/xmlns/blueprint/v1.0.0"
xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
xsi:schemaLocation="http://www.osgi.org/xmlns/blueprint/v1.0.0
http://www.osgi.org/xmlns/blueprint/v1.0.0/blueprint.xsd">
<bean id="patientService" class="com.test.service.PatientServiceJpaImpl" />
<service id="osgiPatientService" ref="patientService" interface="com.test.service.PatientService" />
</blueprint>
The bundle is deployed successfully and the service is registered. The problem is that when the PatientService is referenced from another bundle, the entity manager has not been injected, thus throwing a NullPointerException in the find(Integer id) method. The following is a snippet of the consumer's META-INF/spring/consumer-context.xml:
<beans xmlns="http://www.springframework.org/schema/beans"
xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
xmlns:context="http://www.springframework.org/schema/context"
xmlns:jaxws="http://cxf.apache.org/jaxws"
xmlns:osgi="http://www.springframework.org/schema/osgi"
xsi:schemaLocation="http://www.springframework.org/schema/beans
http://www.springframework.org/schema/beans/spring-beans.xsd
http://www.springframework.org/schema/context
http://www.springframework.org/schema/context/spring-context.xsd
http://cxf.apache.org/jaxws
http://cxf.apache.org/schemas/jaxws.xsd
http://www.springframework.org/schema/osgi
http://www.springframework.org/schema/osgi/spring-osgi.xsd">
<bean id="patientServiceImpl" class="com.test.ws.PatientWebServiceImpl" >
<property name="patientService">
<osgi:reference interface="com.test.service.PatientService"/>
</property>
</bean>
...
</beans>
Just to be clear, the PatientService is injected in the consumer bundle, but the entity manager is not injected in the provider bundle. Also, it does not appear to be an issue with the persistence unit due to the following log output when starting the original service:
125 psu TRACE [SpringOsgiExtenderThread-14] openjpa.Runtime - org.apache.openjpa.persistence.PersistenceProviderImpl#24a5031d creating container org.apache.openjpa.persistence.EntityManagerFactoryImpl#4d6f77b6 for PU psu.
To get an idea what is going on, I logged the the object memory reference and stack trace in the constructor of the PatientServiceJpaImpl class. The constructor was called twice (creating two different objects):
The first output appears to originate from the osgi container starting from org.apache.felix and more or less ending in org.apache.aries.blueprint.
The second output appears to originate from the spring framework starting from org.springframework.osgi and more or less ending in org.springframework.beans.BeanUtils.
When the consumer service is called, the reference it has is to the blueprint instantiated object, which does not have an injected entity manager. Also from the logs, the persistence unit is instantiated after the blueprint instantiation of the PatientServiceJpaImpl object.
I have searched and tinkered with this issue for quite a while and I've run out of ideas. The irony is that it actually worked at one point, but I had made so many changes to get it to work that it was a rats nest that I was not able to back out of successfully.
Why is the persistence context not injected in the blueprint managed object? Any ideas will be appreciated. Thanks.

I'm not sure if this is going to work, cause you are mixing spring with blueprint. I have a working application based only on blueprint and I'm quite happy. For your use-case I'd suggest using blueprint at least for your JPA part. You still can use spring-dm for using the jpa classes as services.
<blueprint default-activation="eager"
xmlns="http://www.osgi.org/xmlns/blueprint/v1.0.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
xmlns:jpa="http://aries.apache.org/xmlns/jpa/v1.0.0" xmlns:tx="http://aries.apache.org/xmlns/transactions/v1.0.0">
<bean id="patientService" class="com.test.service.PatientServiceJpaImpl" >
<jpa:context property="em" unitname="dn1" />
<tx:transaction method="*" value="Required" />
</bean>
<service id="osgiPatientService" ref="patientService" interface="com.test.service.PatientService" />
</blueprint>
Your PatientServiceJPAImpl I would change to not contain any annotations.
public class PatientServiceJpaImpl implements PatientService {
protected EntityManager em;
#Override
public Patient find(Integer id) {
return em.find(Patient.class, id);
}
}

A good way to deal with this would be to use Gemini JPA. With Gemini JPA, your JPA bundle would automatically expose an EntityManagerFactory OSGi service, based on the configurations in your persistence.xml. Thus, in the JPA client bundle, the blueprint just needs to import this service with a filter condition specifying the persistence unit name.
Here's a small implementation on those lines: mvc-osgi
If the EMF service doesn't work for you, you can use the EntityManagerFactoryBuilder service exposed by the Gemini JPA bundle to manually create the EMF. This would require calling the "createEntityManagerFactory".

Related

OpenJPA Exception related to JDBC Driver and connection URL in TomEE+

We are facing issue in our application with respect to the persistence configuration. The application runs on TomEE Plus (7.0) and uses Open JPA implementation. Below is the error which we are getting
<openjpa-2.4.2-r422266:1777108 nonfatal general error> org.apache.openjpa.persistence.PersistenceException: There were errors initializing your configuration: <openjpa-2.4.2-r422266:1777108 fatal user error> org.apache.openjpa.util.UserException: A connection could not be obtained for driver class "oracle.jdbc.xa.client.OracleXADataSource" and URL "jdbc:oracle:thin:#//mydburl.abc.com:1881/MYSID.ABC.COM". You may have specified an invalid URL.
We dont' get the above error when using oracle.jdbc.driver.OracleDriver. The XA driver settings were working fine on IBM WebSphere 8.5. Is there anything else which we need to configure in TomEE+ to get it working?
Update
Adding the persistence.xml file as well
<?xml version="1.0" encoding="UTF-8"?>
<persistence xmlns="http://java.sun.com/xml/ns/persistence"
version="1.0">
<persistence-unit name="MySchema" transaction-type="JTA">
<provider>org.apache.openjpa.persistence.PersistenceProviderImpl</provider>
<jta-data-source>myjndi</jta-data-source>
<class>com.abc.jpa.entity.Tuser</class>
<class>com.abc.jpa.entity.Taddress</class>
<properties>
<property name="tomee.jpa.factory.lazy" value="true"></property>
<property name="javax.persistence.jdbc.driver" value="oracle.jdbc.xa.client.OracleXADataSource" />
<property name="javax.persistence.jdbc.url"
value="jdbc:oracle:thin:#//mydburl.abc.com:1881/MYSID.ABC.COM" />
<property name="javax.persistence.jdbc.user" value="userName" />
<property name="javax.persistence.jdbc.password" value="password" />
</properties>
</persistence-unit>
</persistence>
As mentioned, it works fine if I use oracle.jdbc.driver.OracleDriver as the jdbc driver class

JPA persistence provider

I have a problem with my jpa project.
Already found this thread:
JPA: configure persistence provider
My persistence.xml is at:
C:\workspace\DevWorkSample\src\META-INF
so this seems to be correct.
My persistence.xml looks like this:
<?xml version="1.0" encoding="UTF-8"?>
<persistence xmlns="http://java.sun.com/xml/ns/persistence"
xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" version="2.0"
xsi:schemaLocation="http://java.sun.com/xml/ns/persistence http://java.sun.com/xml/ns/persistence/persistence_2_0.xsd">
<persistence-unit name="CustomerQuery">
<jta-data-source>java:comp/env/jdbc/MyDataSource</jta-data-source>
<class>myjpa.CustomerAcct</class>
<!-- exclude-unlisted-classes>true</exclude-unlisted-classes -->
<properties>
<property name="openjpa.LockTimeout" value="30000" />
<property name="openjpa.jdbc.TransactionIsolation" value="read-committed" />
<property name="openjpa.Log" value="none" />
<property name="openjpa.jdbc.UpdateManager" value="operation-order" />
<property name="openjpa.ConnectionURL" value="DB URL"/>
<property name="openjpa.ConnectionDriverName" value="Driver Name"/>
<property name="openjpa.ConnectionUserName" value="userid"/>
<property name="openjpa.ConnectionPassword" value="password"/>
<property name="openjpa.jdbc.SynchronizeMappings" value="buildSchema(ForeignKeys=true)"/>
<property name="javax.persistence.jdbc.driver" value="com.mysql.jdbc.Driver" />
</properties>
</persistence-unit>
</persistence>
Errors:
1.
An error occurred in the com.ibm.websphere.persistence.PersistenceProviderImpl persistence provider when it attempted to create the container entity manager factory for the CustomerQuery persistence unit. The following error occurred: There was an error when invoking the static newInstance method on the named factory class "com.ibm.ws.persistence.jdbc.kernel.WsJpaJDBCBrokerFactory". See the nested exception for details.
2.
For the [com.ibm.devworks.Deposit] servlet, com.ibm.devworks.Deposit servlet class was found, but a resource injection failure has occurred. CWNEN0030E: The server was unable to obtain an object instance for the java:comp/env/com.ibm.devworks.Deposit/emf reference. The exception message was: <openjpa-2.2.3-SNAPSHOT-r422266:1642995 fatal general error> org.apache.openjpa.persistence.PersistenceException: There was an error when invoking the static newInstance method on the named factory class "com.ibm.ws.persistence.jdbc.kernel.WsJpaJDBCBrokerFactory". See the nested exception for details.
What do I have to change to fix this?

Access to Derby database from another project using EclipseLink

I have a dynamic web project that creates and writes Derby database. Everything works fine. Here is the persistence.xml I used:
<persistence xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://java.sun.com/xml/ns/persistence http://java.sun.com/xml/ns/persistence/persistence_2_0.xsd"
version="2.0" xmlns="http://java.sun.com/xml/ns/persistence">
<persistence-unit name="alerts" transaction-type="RESOURCE_LOCAL">
<provider>org.eclipse.persistence.jpa.PersistenceProvider</provider>
<class>test.Alert</class>
<properties>
<property name="javax.persistence.jdbc.driver" value="org.apache.derby.jdbc.EmbeddedDriver" />
<property name="javax.persistence.jdbc.url" value="jdbc:derby:databases/bDb;create=true" />
<property name="javax.persistence.jdbc.user" value="user" />
<property name="javax.persistence.jdbc.password" value="user-pwd" />
<!-- EclipseLink should create the database schema automatically -->
<property name="eclipselink.ddl-generation" value="create-tables" />
<property name="eclipselink.ddl-generation.output-mode"
value="database" />
<property name="eclipselink.logging.level" value="FINEST" />
<property name="eclipselink.logging.level.sql" value="FINEST" />
</properties>
</persistence-unit>
Now I would like to create a java project that reads the same database. So I use the same persistence.xml (except that I change "create=true" to "create=false" since I don't want to create a new table). but I got this error:
[EL Severe]: ejb: 2014-12-28 22:27:20.379--ServerSession(1488953836)--Thread(Thread[DefaultQuartzScheduler_Worker-7,5,main])--Local Exception Stack:
Exception [EclipseLink-4002] (Eclipse Persistence Services - 2.5.2.v20140319-9ad6abd): org.eclipse.persistence.exceptions.DatabaseException
Internal Exception: java.sql.SQLException: Database 'databases/bDb' not found.
Error Code: 40000
at org.eclipse.persistence.exceptions.DatabaseException.sqlException(DatabaseException.java:331)
at org.eclipse.persistence.exceptions.DatabaseException.sqlException(DatabaseException.java:326)
at org.eclipse.persistence.sessions.DefaultConnector.connect(DefaultConnector.java:138)
at org.eclipse.persistence.sessions.DatasourceLogin.connectToDatasource(DatasourceLogin.java:162)
at org.eclipse.persistence.internal.sessions.DatabaseSessionImpl.setOrDetectDatasource(DatabaseSessionImpl.java:204)
at org.eclipse.persistence.internal.sessions.DatabaseSessionImpl.loginAndDetectDatasource(DatabaseSessionImpl.java:741)
at org.eclipse.persistence.internal.jpa.EntityManagerFactoryProvider.login(EntityManagerFactoryProvider.java:239)
at org.eclipse.persistence.internal.jpa.EntityManagerSetupImpl.deploy(EntityManagerSetupImpl.java:685)
at org.eclipse.persistence.internal.jpa.EntityManagerFactoryDelegate.getAbstractSession(EntityManagerFactoryDelegate.java:204)
at org.eclipse.persistence.internal.jpa.EntityManagerFactoryDelegate.createEntityManagerImpl(EntityManagerFactoryDelegate.java:304)
at org.eclipse.persistence.internal.jpa.EntityManagerFactoryImpl.createEntityManagerImpl(EntityManagerFactoryImpl.java:336)
at org.eclipse.persistence.internal.jpa.EntityManagerFactoryImpl.createEntityManager(EntityManagerFactoryImpl.java:302)
If I use "create=true", it will create a new database instance (it is different from the one I created from the web project). How do I fix this problem? Thanks a lot!
Since you're using a relative filename in your jdbc.url (databases/bDb), Derby is looking for the database relative to your application start directory.
And your two separate applications have two separate directories in which they are being run.
You could address this in a number of ways:
Arrange for each application to be run from the same directory
Use an absolute database path name, not a relative one, in your jdb.url value
Use the Derby Network Server configuration, not the Derby Embedded configuration
And there are undoubtedly other approaches.

ServiceMix / Blueprint / JPA Integration

I have been spending the week attempting to integrate JPA / ServiceMix 4.5.1 / camel-jpa 2.10.4 / Blueprint together. I'm currently using OpenJPA, but am not tied to it. The version of aries jpa used by servicemix is 0.3.0.
The stack trace I cannot get past is:
org.osgi.service.blueprint.container.ComponentDefinitionException: Error when instanciating bean workoutEntity of class class [...].WorkoutEntity
at org.apache.aries.blueprint.container.BeanRecipe.getInstance(BeanRecipe.java:271)[10:org.apache.aries.blueprint:0.3.2]
at org.apache.aries.blueprint.container.BeanRecipe.internalCreate(BeanRecipe.java:708)[10:org.apache.aries.blueprint:0.3.2]
at org.apache.aries.blueprint.di.AbstractRecipe.create(AbstractRecipe.java:64)[10:org.apache.aries.blueprint:0.3.2]
at org.apache.aries.blueprint.di.RefRecipe.internalCreate(RefRecipe.java:60)[10:org.apache.aries.blueprint:0.3.2]
at org.apache.aries.blueprint.di.AbstractRecipe.create(AbstractRecipe.java:64)[10:org.apache.aries.blueprint:0.3.2]
at org.apache.aries.blueprint.container.BlueprintRepository.createInstances(BlueprintRepository.java:219)[10:org.apache.aries.blueprint:0.3.2]
[...]
Caused by: <openjpa-2.2.0-r422266:1244990 nonfatal general error> org.apache.openjpa.persistence.PersistenceException: [javax.sql.DataSource]
at org.apache.openjpa.kernel.AbstractBrokerFactory.newBroker(AbstractBrokerFactory.java:218)
at org.apache.openjpa.kernel.DelegatingBrokerFactory.newBroker(DelegatingBrokerFactory.java:156)
at org.apache.openjpa.persistence.EntityManagerFactoryImpl.createEntityManager(EntityManagerFactoryImpl.java:227)
[...]
Caused by: java.lang.IllegalArgumentException: [javax.sql.DataSource]
at org.apache.aries.jndi.services.ServiceHelper.proxyPriviledged(ServiceHelper.java:348)
at org.apache.aries.jndi.services.ServiceHelper.access$700(ServiceHelper.java:65)
at org.apache.aries.jndi.services.ServiceHelper$1.run(ServiceHelper.java:285)
at java.security.AccessController.doPrivileged(Native Method)[:1.6.0_43]
[...]
I've attempted several variations. Here is my current configuration:
persistence.xml:
<persistence-unit name="customer1" transaction-type="JTA">
<provider>org.apache.openjpa.persistence.PersistenceProviderImpl</provider>
<jta-data-source>osgi:service/javax.sql.DataSource/(osgi.jndi.service.name=jdbc/prototypedb)</jta-data-source>
<class>...</class>
</persistence-unit>
camel-context.xml
<service id="PrototypeDB" interface="javax.sql.DataSource">
<service-properties>
<entry key="osgi.jndi.service.name" value="jdbc/prototypedb"/>
</service-properties>
<bean class="org.apache.commons.dbcp.BasicDataSource">
<property name="driverClassName" value="com.mysql.jdbc.Driver"/>
<property name="url" value="jdbc:mysql://localhost:3306/prototype"/>
<property name="username" value="root"/>
<property name="password" value="..."/>
</bean>
</service>
<service ref="workoutEntity" interface="..."/>
<bean id="workoutEntity" class="...">
<jpa:unit index="0" unitname="customer1" />
<tx:transaction method="*" value="Required"/>
</bean>
Entity Bean (written in groovy)
#Entity
#Table(name='customer1')
#Slf4j
class WorkoutEntity implements IWorkoutEntity{
private EntityManager entityManager
WorkoutEntity(final EntityManagerFactory entityManagerFactory) {
this.entityManager = entityManagerFactory.createEntityManager()
}
#Handler
void create( #Body final String input) {
// ...
}
}
I've attempted multiple different implementations of a DataSource, including the BasicDataSource, org.springframework.jdbc.datasource.SimpleDriverDataSource, and com.mysql.jdbc.jdbc2.optional.MysqlDataSource. All cause the IllegalArgumentException.
I've also attempted to forego using JNDI and instead define the data source directly in the persistence.xml. This causes ClassNotFoundException in the OpenJPA bundle, as it is not importing the mysql driver. I'd prefer to define this in my camel-context.xml and would prefer to not re-bundle the OpenJPA jar.
You probably also need the aries JNDI features installed. This helps to call OSGi services via JNDI lookups. This should be the missing piece.

Configuring EJB on JBoss AS 7 using JTA datasources: every statement is commited

everybody!
I've been trying to find the answer for some time but I didn't manage.
I try to configure my application and make it work under JBoss Application Server 7.1.1, using Enterprise Java Beans. My application is Web application, it uses servlets and injects other classes as EJBs. The problem is that every statement gets commited, so that means no transaction management is supported.
In my test example I have an entity with a collection of children (mapped with a relationship OneToMany with a property CascadeType.ALL). If a record in a collection has some problems (e.g. non-existing foreign key), it can't be inserted into table and throws exception. However, the parent entity gets inserted, so I assume the inserts are done in different separate transactions. This is strictly undesired behavior and I try to resolve it.
Technical parameters:
DBMS: Oracle EE 11g
AS: JBoss AS 7.1.1
my persistence.xml:
<?xml version="1.0" encoding="UTF-8"?>
<persistence version="2.0"
xmlns="http://java.sun.com/xml/ns/persistence" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
xsi:schemaLocation="http://java.sun.com/xml/ns/persistence/">
<persistence-unit name="OracleEntityManager">
<jta-data-source>java:jboss/CmaDevDS</jta-data-source>
<properties>
<property name="hibernate.dialect" value="org.hibernate.dialect.Oracle9iDialect" />
<property name="hibernate.hbm2ddl.auto" value="none" />
<property name="hibernate.jdbc.batch_size" value="20" />
<property name="hibernate.show_sql" value="true" />
<property name="hibernate.format_sql" value="true" />
<property name="hibernate.use_sql_comments" value="true" />
</properties>
</persistence-unit>
</persistence>
my EJB:
#Stateless(name="EntityWriter")
#TransactionManagement(TransactionManagementType.CONTAINER)
public class EntityWriter {
#Resource
private SessionContext context;
/*#Resource
UserTransaction ut;*/
#PersistenceContext(unitName = "OracleEntityManager",type=PersistenceContextType.EXTENDED)
EntityManager em;
#TransactionAttribute(TransactionAttributeType.REQUIRED)
public EntityMarker insertEntity(EntityMarker entity)throws Exception
{
try
{
entity = em.merge(entity);
em.flush();
return entity;
}
catch (Exception e)
{
context.setRollbackOnly();
e.printStackTrace();
return null;
}
}
}
Actually I tried both EJB approaches: Container Management Transaction and Bean Management Transaction and neither works as I expect.
When I inject the bean into servlets I do it like this:
#EJB(name = "EntityWriter")
private EntityWriter entityWriter;
Now I think the bean is fine, probably something is missing in persistence.xml.
Would be grateful to any ideas. Thanks in advance!
Everything works correct after I edited Datasource configuration via JBoss Administration console and set a checkbox "Use JTA". It was unchecked by default.
You're right, Chris. Thanks!