Running SimpleOpenNI and leJOS in same project - eclipse

We have a project in which we want to control a Lego Mindstorms robot with the Microsoft Kinect sensor. We decided to use SimpleOpenNI with Processing to read the sensor and leJOS to control the robot for a simple reason: since both is in Java, we can specifiy a kind of RoboHandler and call its methods from the sensor reading class.
In order to achieve that, we downloaded the leJOS plugin for eclipse, created a new leJOS NXT project and put the processing and SimpleOpenNI libraries in the build path. Note that to use SimpleOpenNI, it is required an old processing version without Java.
Now the problem is, that when installing leJOS, it strictly requires a 32-bit Java JDK, so I had to download this and point to it at installation.
At this point, following build paths are in the project:
LeJOS NXT Runtime (which has among others java.awt classes)
core.jar (used to run Processing in eclipse)
SimpleOpenNI.jar
Having all this, and setting up a first Processing sketch like
import processing.core.*;
public class Test extends PApplet{
(....)
}
results in following error code:
Multiple markers at this line
- The type java.awt.event.MouseMotionListener cannot be resolved. It is indirectly referenced from
required .class files
- The type java.applet.Applet cannot be resolved. It is indirectly referenced from required .class files
- The type java.awt.event.MouseListener cannot be resolved. It is indirectly referenced from required .class files
- The hierarchy of the type FirstTry is inconsistent
- The type java.awt.event.FocusListener cannot be resolved. It is indirectly referenced from required .class files
- The type java.awt.event.KeyListener cannot be resolved. It is indirectly referenced from required .class files
When I downloaded the Processing without Java version, I wasn't able to choose from 32bit- or 64bit version. The SimpleOpenNI is installed as 64bit-version.
When adding the 64bit-JDK (eclipse workspace default) as workspace too, the error disappears, but when trying to run a sketch, following error gets printed in the console:
Invalid layout of java.lang.Thread at name
#
# A fatal error has been detected by the Java Runtime Environment:
#
# Internal Error (javaClasses.cpp:128), pid=9176, tid=8740
# fatal error: Invalid layout of preloaded class
#
# JRE version: 7.0_04-b22
# Java VM: Java HotSpot(TM) 64-Bit Server VM (23.0-b21 mixed mode windows-amd64 compressed oops)
# Failed to write core dump. Minidumps are not enabled by default on client versions of Windows
#
# An error report file with more information is saved as:
# C:\Users\Valentino\Desktop\workspaces\workspace_processing\RoboZeugs\bin\hs_err_pid9176.log
#
# If you would like to submit a bug report, please visit:
# http://bugreport.sun.com/bugreport/crash.jsp
#
So in my oppinion there is a problem with the JDK versions (32 and 64 bit), but there must be a way to handle this. Has anyone experience on this specific topic, maybe even with Kinect -> Mindstorms? Can anybody tell me what this error exactly means?

You're mixing classes that are designed to run with the JVM on the NXT brick (i.e. everything in classes.jar) with classes that are designed to run with a fully fledged JVM on the PC.
Don't do that. If you want to remote control an NXT, use pccomms.jar and everything else in lib/pc. But never add classes.jar or anything else in lib/nxt to the classpath when you're starting a Java program on your PC.
The error message about java.lang.Thread is probably due to the fact, that java.lang.Thread in classes.jar in by no means compatible with java.lang.Thread that comes with the JVM on your PC.

Related

Java Illegal Argument Exception thrown when opening NetLogo model in Jython

I am trying to control NetLogo's API using Jython 2.7.0 (on Java 1.8.0_131) running on OS X El Capitan (10.11.6) to run experiments. In trying to run the following code:
import site
site.addsitedir("/Users/nqe/NetLogo/NetLogo 6.0.1/Java/")
import org.nlogo.headless.HeadlessWorkspace as hw
workspace = hw.newInstance()
workspace.open("models/Sample Models/Earth Science/Fire.nlogo")
workspace.command("set density 62")
workspace.command("random-seed 0")
workspace.command("setup")
workspace.command("repeat 50 [ go ]")
print (workspace.report("burned-trees"))
workspace.dispose()
I get the following error:
at scala.Predef$.require(Predef.scala:264)
at org.nlogo.generate.PrimitiveCache$.read$1(PrimitiveCache.scala:22)
at org.nlogo.generate.PrimitiveCache$.$anonfun$getClassReader$1(PrimitiveCache.scala:26)
at scala.collection.mutable.AbstractMap.getOrElseUpdate(Map.scala:80)
at org.nlogo.generate.PrimitiveCache$.getClassReader(PrimitiveCache.scala:26)
at org.nlogo.generate.PeepholeSafeChecker.processClass(PeepholeSafeChecker.scala:49)
at org.nlogo.generate.PeepholeSafeChecker.isSafe(PeepholeSafeChecker.scala:42)
at org.nlogo.generate.Generator$InstructionGenerator.generateInstruction(Generator.scala:190)
at org.nlogo.generate.Generator$InstructionGenerator.generateBodyMethod(Generator.scala:124)
at org.nlogo.generate.Generator$InstructionGenerator.generate(Generator.scala:99)
at org.nlogo.generate.Generator.org$nlogo$generate$Generator$$recurse(Generator.scala:29)
at org.nlogo.generate.Generator.$anonfun$recurse$1(Generator.scala:31)
at scala.collection.TraversableLike.$anonfun$map$1(TraversableLike.scala:234)
at scala.collection.mutable.ArrayOps$ofRef.foreach(ArrayOps.scala:193)
at scala.collection.TraversableLike.map$(TraversableLike.scala:234)
at scala.collection.mutable.ArrayOps$ofRef.map(ArrayOps.scala:193)
at org.nlogo.generate.Generator.org$nlogo$generate$Generator$$recurse(Generator.scala:31)
at org.nlogo.generate.Generator.$anonfun$generate$1(Generator.scala:25)
at scala.collection.TraversableLike.$anonfun$map$1(TraversableLike.scala:234)
at scala.collection.mutable.ArrayOps$ofRef.foreach(ArrayOps.scala:193)
at scala.collection.TraversableLike.map$(TraversableLike.scala:234)
at scala.collection.mutable.ArrayOps$ofRef.map(ArrayOps.scala:193)
at org.nlogo.generate.Generator.generate(Generator.scala:25)
at org.nlogo.compile.CompilerMain$.assembleProcedure(CompilerMain.scala:79)
at org.nlogo.compile.CompilerMain$.$anonfun$compile$2(CompilerMain.scala:55)
at scala.collection.TraversableLike.$anonfun$map$1(TraversableLike.scala:234)
at scala.collection.immutable.List.foreach(List.scala:378)
at scala.collection.TraversableLike.map$(TraversableLike.scala:234)
at scala.collection.immutable.List.map(List.scala:284)
at org.nlogo.compile.CompilerMain$.compile(CompilerMain.scala:55)
at org.nlogo.compile.Compiler.compileProgram(Compiler.scala:52)
at org.nlogo.headless.HeadlessModelOpener.openFromModel(HeadlessModelOpener.scala:54)
at org.nlogo.headless.HeadlessWorkspace.openModel(HeadlessWorkspace.scala:532)
at org.nlogo.headless.HeadlessWorkspace.open(HeadlessWorkspace.scala:499)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:498)
java.lang.IllegalArgumentException: java.lang.IllegalArgumentException: requirement failed
In case the "import site" part is not clear, I did the following:
Create a jython script to write all .jar files in "/Users/nqe/NetLogo/NetLogo 6.0.1/Java/" to a .pth file.
I then placed this .pith file into said the .../Java/ directory with the .jar files.
This allows me to access all the .jar dependencies from sys.path when needing to the import various API features of NetLogo.
I can't figure out exactly what causes this error, for in running on python interactive mode, I was able to successfully create a new instance of NetLogo JVM using the hw.newInstance() command (I could see a Java icon pop up when running this code), and the open command threw the appropriate errors if I fail to specify a url, for example.
Because of this, I thought it might have something to do with my JVM not being configured properly, so I tried a few things.
First, I checked that I was able to actually run the java example of controlling NetLogo API in headless mode found here: https://github.com/NetLogo/NetLogo/wiki/Controlling-API. I was able to run the code given here using these commands:
javadir=/Users/nqe/NetLogo/ControlAPI/
netjardir=/Users/nqe/NetLogo/NetLogo\ 6.0.1/Java/netlogo-mac-app.jar
javaname=Example1
javac -cp "${javadir}":"${netjardir}" $javaname.java
java -cp "${javadir}":"${netjardir}" $javaname
without changing any JVM settings manually. Nevertheless, I went ahead and tried changing things in my JVM settings when running the jython code such as the path to docs and extensions, but in particular, to the ./lib directory. Unfortunately, specifying the following JVM setting:
-Djava.library.path=~/JRE/Contents/Home/jre/lib/
does nothing to help the cause. Note that the ~ here is short for being in the NetLogo 6.0.1 directory and that this was the only lib directory I could find.
Finally, I discord this: when I try to run the above jython script when only specifying the path to netlogo-mac-app.jar, I AM NOT ABLE TO IMPORT the headless class stuff. Hence, the compilation/ running of the java while specifying only this one .jar classpath could possibly be somehow accessing some useful meta-data necessary for NetLogo to work (I don't know if this is possible with my level of Java background).
Upon thinking this, I found a NetLogo.cfg file in ~/NetLogo 6.0.1.app/Contents/Java/ that contains the following info:
[Application]
app.name=NetLogo
app.mainjar=netlogo-mac-app.jar
app.version=6.0.1
app.preferences.id=org/nlogo/app
app.mainclass=org/nlogo/app/MacApplication
app.classpath=$APPDIR/../../Java/args4j-2.0.12.jar:$APPDIR/../../Java/asm-5.0.3.jar:$APPDIR/../../Java/asm-5.0.3.jar:$APPDIR/../../Java/asm-all-5.0.4.jar:$APPDIR/../../Java/asm-all-5.0.4.jar:$APPDIR/../../Java/asm-analysis-5.0.3.jar:$APPDIR/../../Java/asm-analysis-5.0.3.jar:$APPDIR/../../Java/asm-tree-5.0.3.jar:$APPDIR/../../Java/asm-tree-5.0.3.jar:$APPDIR/../../Java/asm-util-5.0.3.jar:$APPDIR/../../Java/asm-util-5.0.3.jar:$APPDIR/../../Java/behaviorsearch.jar:$APPDIR/../../Java/commons-codec-1.10.jar:$APPDIR/../../Java/commons-codec-1.10.jar:$APPDIR/../../Java/commons-logging-1.1.1.jar:$APPDIR/../../Java/commons-logging-1.1.1.jar:$APPDIR/../../Java/gluegen-rt-2.3.2.jar:$APPDIR/../../Java/gluegen-rt-2.3.2.jar:$APPDIR/../../Java/httpclient-4.2.jar:$APPDIR/../../Java/httpclient-4.2.jar:$APPDIR/../../Java/httpcore-4.2.jar:$APPDIR/../../Java/httpcore-4.2.jar:$APPDIR/../../Java/httpmime-4.2.jar:$APPDIR/../../Java/httpmime-4.2.jar:$APPDIR/../../Java/java-objc-bridge-1.0.0.jar:$APPDIR/../../Java/jcommon-1.0.16.jar:$APPDIR/../../Java/jfreechart-1.0.13.jar:$APPDIR/../../Java/jhotdraw-6.0b1.jar:$APPDIR/../../Java/jhotdraw-6.0b1.jar:$APPDIR/../../Java/jmf-2.1.1e.jar:$APPDIR/../../Java/jmf-2.1.1e.jar:$APPDIR/../../Java/jna-4.2.2.jar:$APPDIR/../../Java/jogl-all-2.3.2.jar:$APPDIR/../../Java/jogl-all-2.3.2.jar:$APPDIR/../../Java/json-simple-1.1.1.jar:$APPDIR/../../Java/json-simple-1.1.1.jar:$APPDIR/../../Java/log4j-1.2.16.jar:$APPDIR/../../Java/log4j-1.2.16.jar:$APPDIR/../../Java/macro-compat_2.12-1.1.1.jar:$APPDIR/../../Java/macro-compat_2.12-1.1.1.jar:$APPDIR/../../Java/netlogo-6.0.1.jar:$APPDIR/../../Java/netlogo-6.0.1.jar:$APPDIR/../../Java/netlogo-mac-app.jar:$APPDIR/../../Java/parboiled-core-1.1.7.jar:$APPDIR/../../Java/parboiled-core-1.1.7.jar:$APPDIR/../../Java/parboiled-java-1.1.7.jar:$APPDIR/../../Java/parboiled-java-1.1.7.jar:$APPDIR/../../Java/parboiled_2.12-2.1.3.jar:$APPDIR/../../Java/parboiled_2.12-2.1.3.jar:$APPDIR/../../Java/pegdown-1.6.0.jar:$APPDIR/../../Java/pegdown-1.6.0.jar:$APPDIR/../../Java/picocontainer-2.13.6.jar:$APPDIR/../../Java/picocontainer-2.13.6.jar:$APPDIR/../../Java/rsyntaxtextarea-2.6.0.jar:$APPDIR/../../Java/rsyntaxtextarea-2.6.0.jar:$APPDIR/../../Java/scala-library-2.12.0.jar:$APPDIR/../../Java/scala-library-2.12.1.jar:$APPDIR/../../Java/scala-library-2.12.1.jar:$APPDIR/../../Java/scala-parser-combinators_2.12-1.0.5.jar:$APPDIR/../../Java/scala-parser-combinators_2.12-1.0.5.jar:$APPDIR/../../Java/shapeless_2.12-2.3.2.jar:$APPDIR/../../Java/shapeless_2.12-2.3.2.jar
app.runtime=$APPDIR/../../JRE
app.identifier=org.nlogo.app
[JVMOptions]
-Dnetlogo.extensions.dir=$APPDIR/../../extensions
-Dnetlogo.models.dir=$APPDIR/../../models
-Dnetlogo.docs.dir=$APPDIR/../../docs
-Xdock:name=NetLogo
-Dorg.nlogo.mac.appClassName=org.nlogo.app.App$
-Xmx1024m
-Dfile.encoding=UTF-8
-Dapple.awt.graphics.UseQuartz=true
[JVMUserOptions]
[ArgOptions]
This seemed promising, but literally deleting this file had no affect on my ability to run NetLogo by opening the application/ using the Control API with Java method. As such, I am stumped, so any help would be greatly appreciated.

Debugging OfBiz in Eclipse gives MissingResourceException

I downloaded the OfBiz Java application and the following line throws an MissingResourceException:
ResourceBundle res = ResourceBundle.getBundle(settingsResourceName);
The value of settingsResourceName is "cache", but I cannot find any file called cache.properties or cache_en.properties.
Where should I be looking? I'm new to Java. All my research on SO says there should be such a file.
I imported OfBiz in Eclipse using the Import menu option and selecting Existing Project from File System (I'm not in front of my dev machine so I don't remember the exact wording). But I chose the root folder of the downloaded OfBiz.
I then added the appropriate VM Arguments in the Run Configuration to get it to run properly at least. And that's it, on the first Run I got the above error. I think it has to do with a missing class path but I don't know what to add to class path.
Here is the stack trace:
ERROR StatusLogger No log4j2 configuration file found. Using default configuration: logging only errors to the console.
Exception in thread "main" java.lang.ExceptionInInitializerError
at org.apache.ofbiz.base.util.Debug.<clinit>(Debug.java:68)
at org.apache.ofbiz.base.container.ContainerLoader.load(ContainerLoader.java:61)
at org.apache.ofbiz.base.start.StartupControlPanel.loadStartupLoaders(StartupControlPanel.java:202)
at org.apache.ofbiz.base.start.StartupControlPanel.start(StartupControlPanel.java:69)
at org.apache.ofbiz.base.start.Start.main(Start.java:84)
Caused by: java.util.MissingResourceException: Can't find bundle for base name cache, locale en
at java.util.ResourceBundle.throwMissingResourceException(ResourceBundle.java:1564)
at java.util.ResourceBundle.getBundleImpl(ResourceBundle.java:1387)
at java.util.ResourceBundle.getBundle(ResourceBundle.java:773)
at org.apache.ofbiz.base.util.cache.UtilCache.setPropertiesParams(UtilCache.java:174)
at org.apache.ofbiz.base.util.cache.UtilCache.setPropertiesParams(UtilCache.java:170)
at org.apache.ofbiz.base.util.cache.UtilCache.setPropertiesParams(UtilCache.java:166)
at org.apache.ofbiz.base.util.cache.UtilCache.<init>(UtilCache.java:124)
at org.apache.ofbiz.base.util.cache.UtilCache.createUtilCache(UtilCache.java:769)
at org.apache.ofbiz.base.util.UtilProperties.<clinit>(UtilProperties.java:75)
... 5 more
UPDATE:
My mistake, I found two files both called cache.properties in the following folders:
ofbiz-trunk/build/resources/main
ofbiz-trunk/framework/base/config
But these are folders, not packages. I tried putting them in the .classpath but that did not work, I still kept getting the same error.
As suspected, I knew it was because of a missing reference to a class path. After looking at a section on this page: http://www.opensourcestrategies.com/ofbiz/ofbiz_eclipse.php, I learned that I was supposed to go to the Java Build Path and in the Libraries tab, click on Add Class Folder, then point that to ofbiz-trunk/framework/base/config. Which is where I have one of the cache.properties files.

Oprofile not finding libraries

I'm trying to use OProfile on Eclipse (3.8). The Juno version of oprofile didn't work, so I installed the Luna one. This one at least starts up, but can never find the libraries.
Here is the error:
ns3-dev-lena-profiling-debug: error while loading shared libraries: libns3-dev-lte- debug.so: cannot open shared object file: No such file or directory
profiled app exited with the following status: 127
I know that that means I need to add the library path. So I went to Profiling Tools Configurations, and specified the path under environmental variables as:
name: LD_LIBRARY_PATH
value: {workspace_loc:ns3dev2}/build (appended)
I manually checked and the library is located in the build folder. Furthermore, this library path works fine if I debug the same project instead (or run it...).
I've deleted the configuration and remade it, but it's the same error.
I also tried adding the same path to PATH instead of LD_LIBRARY_PATH, but that doesn't make any difference. (Just tried it for the hell of it).
Any thoughts?
Edit, I get the same problem on Eclipse 4.4 (Luna). I found the logs for the errors and the error is:
!ENTRY org.eclipse.linuxtools.oprofile.core 4 0 2014-10-27 12:33:07.200
!MESSAGE opreport process error output: warning: /no-vmlinux could not be found.

Error Mapping Shared Libraries with Eclipse CDT and GDB

I'm trying to debug a program using a Ubuntu 12.04 host and an ARM client with Eclipse Kepler, CDT, and GDB. The host is running GDB 7.4 and the client 7.0.1.
In my .gdbinit file I set sysroot /usr/local/arm-none-gnueabi/arm-none-linux-gnueabi/
However, when I try to debug I get the following error:
Warning: Unable to find dynamic linker breakpoint function.
GDB will be unable to debug shared library initializers
and track explicitly loaded dynamic code.
The target endianness is set automatically (currently little endian)
Error while mapping shared library sections:
/usr//lib/libstdc++.so.6: No such file or directory.
Error while mapping shared library sections:
/lib/libm.so.6: No such file or directory.
Warning: .dynamic section for "/usr/local/arm-none-linux-gnueabi/arm-none-linux-gnueabi/lib/libgcc_s.so.1" is not at the expected address (wrong library or version mismatch?)
Error while mapping shared library sections:
/lib/libc.so.6: No such file or directyory.
Error while mapping shared library sections:
/lib/ld-linux.so.3: No such file or directory.
I've searched this problem to death and can't seem to resolve it. Any answers would be most appreciated!

How to include predefined set of netbeans platform modules in maven project?

I am working on maven netbeans platform project consisting of several modules. I need to depend on some modules (say java.source module), but when I try to run the application, it reports, that required modules are not installed. And event despite I have dependency on java.source declared in my pom.xml
I think, that I have to tell maven somehow, to install (and turn on) these modules in the final assembled application before my module is loaded.
How could I do something like this?
UPDATE:
When I try to create complete netbeans application project from maven artifact and add Java Source API as a dependency into pom.xml... when I run the application, window with following message appears:
Warning - could not install some modules: Editor Library 2 - None of the modules providing the capability org.netbeans.modules.editor.actions could be installed. Editor Indentation for Projects - The module named org.netbeans.modules.editor.settings.storage/1 was needed and not found. Editor Indentation for Projects - The module named org.netbeans.modules.options.editor/1 was needed and not found. Project UI API - No module providing the capability org.netbeans.modules.project.uiapi.ActionsFactory could be found. Project UI API - No module providing the capability org.netbeans.modules.project.uiapi.OpenProjectsTrampoline could be found. Project UI API - No module providing the capability org.netbeans.modules.project.uiapi.ProjectChooserFactory could be found. Editor Error Stripe Impl - The module named org.netbeans.modules.editor.errorstripe.api/1 was needed and not found. Java Source - The module named org.netbeans.libs.javacimpl/1 was needed and not found. Java Source - The module named org.netbeans.modules.editor.indent.project/0-1 was needed and not found. Java Source - The module named org.netbeans.modules.java.preprocessorbridge was needed and not found. Java Source - The module named org.netbeans.modules.options.editor/1 was needed and not found. Java Source - The module named org.netbeans.modules.parsing.api/1 was needed and not found. Editor Settings - No module providing the capability org.netbeans.api.editor.settings.implementation could be found. Diff - The module named org.netbeans.modules.options.editor/1 was needed and not found. 11 further modules could not be installed due to the above problems.
The error-message "Module dependency has friend dependency [...] but is not listed as friend" means that you need to specify an implementation version of org.netbeans.modules.options.editor.
You can achieve this by editing src/main/nbm/module.xml to contain the following entry (I didn't use the actually needed values here. Make sure to find out which values to enter for id and explicitValue to satisfy the dependencies (You can find explanations / instructions in the article linked below):
<dependencies>
<dependency>
<id>org.netbeans.modules:org-netbeans-modules-editor</id>
<type>impl</type>
<explicitValue>org.netbeans.modules.editor/1 = 201107282000</explicitValue>
</dependency>
</dependencies>
I'm pretty sure that the following article will explain some issues and help you find out the needed values for id and explicitValue (language is english, author is me):
http://blog.macrominds.de/2011/08/open-favorites-per-default-in-netbeans-rich-client-platform-maven-standalone-application/
I'm currently having related problems with my application, so I might come back with a more concrete solution in a while.
the easiest way is to grab a class that its complaining about, say "org.netbeans.modules.editor.actions" and go to the Add Dependencies and plug it into the Query field.
From there you should be able to tell which module you will need to include