We are using Mongo DB in our Java EE based application.
As per the architecture of our application, the Mongo DB gets continuously updated through different threads (keeping Mongo DB always busy).
So as result Mongo DB is continuously busy with reads, writes and updates.
We have a concern. What we observed is that when Mongo DB is at its peek utilization (known through top command in linux ) , the reads from Mongo DB fetches wrong values.
Sometimes this is reproducible and sometimes not, it depends on the load.
Please let us know how to address this issue.
Due to the replication in asynchronous in mongoDB when you using SlaveOk:true you also read from the secondaries but the data is not certainly present there. Specially when you have big load, the replication over network can slow down, it called replication lag, and you can check it with: http://docs.mongodb.org/manual/reference/method/db.printSlaveReplicationInfo/#db.printSlaveReplicationInfo
If you turn off reading from secondaries with slaveOk : false, your app will read from primaries, to decrease the load use sharding in this case, and have no worries about the primary going down if you have appropriate replication structure one secondary will take over.
Related
Mongo
From this resource I understand why mongo is not A(Highly Available) based on below statement
MongoDB supports a “single master” model. This means you have a master
node and a number of slave nodes. In case the master goes down, one of
the slaves is elected as master. This process happens automatically
but it takes time, usually 10-40 seconds. During this time of new
leader election, your replica set is down and cannot take writes
Is it for the same reason Mongo is said to be Consistent(as write did not happen so returning the latest data in system ) but not Available(not available for writes) ?
Till re-election happens and write operation is in pending, can slave return perform the read operation ? Also does user re-initiate the write operation again once master is selected ?
But i do not understand from another angle why Mongo is highly consistent
As said on Where does mongodb stand in the CAP theorem?,
Mongo is consistent when all reads go to the primary by default.
But that is not true. If under Master/slave model , all reads will go to primary what is the use of slaves then ? It further says If you optionally enable reading from the secondaries then MongoDB becomes eventually consistent where it's possible to read out-of-date results. It means mongo may not be be
consistent with master/slaves(provided i do not configure write to all nodes before return). It does not makes sense to me to say mongo is consistent if all
read and writes go to primary. In that case every other DB also(like cassandra) will be consistent . Is n't it ?
Cassandra
From this resource I understand why Cassandra is A(Highly Available ) based on below statement
Cassandra supports a “multiple master” model. The loss of a single
node does not affect the ability of the cluster to take writes – so
you can achieve 100% uptime for writes
But I do not understand why cassandra is not Consistent ? Is it because node not available for write(as coordinated node is not able to connect) is available for read which can return stale data ?
Go through: MongoDB, Cassandra, and RDBMS in CAP, for better understanding of the topic.
A brief definition of Consistency and availability.
Consistency simply means, when you write a piece of data in a system/distributed system, the same data you should get when you read it from any node of the system.
Availability means, the system should always be available for read/write operation.
Note: Most systems are not, only available or only consistent, they always offer a bit of both
With the above definition let's see where MongoDB and Cassandra fall in CAP.
MongoDB
As you said MongoDB is highly consistent when reads and write go to the same node(the default case). Further, you can choose in MongoDB to read from other secondary nodes instead of reading from only leader/primary.
Now, when you try to read data from secondary, your consistency will completely depend on, how you want to read data:
You could ask data which is up to maximum, say 5 seconds stale or,
You could just say, return data from majority of nodes for your select statement.
Same way when you write from your client into Mongo leader, you can say, a write is successful if the data is replicated to or stored on majority of servers.
Clearly, from above, we can say MongoDb can be highly consistent or eventually consistent based on how you read/write your data.
Now, what about availability? MongoDB is mostly always available, but, the only time when the leader is down, MongoDB can't accept writes, until it figures out the new leader. Hence, not highly available
So, MongoDB is categorized under CP.
What about Cassandra?
In Cassandra, there is no leader and any nodes can accept write, so the Cassandra cluster is always available for writes and reads even if some nodes go down.
What about consistency in Cassandra?
Same as MongoDB Cassandra can be eventually consistent or highly consistent based on how you read/write data.
You can give consistency levels in your read/write operations, For example:
read/write data from one node
read/write data from majority/quorum of nodes and more
Let's say you give a consistency level of one in your read/write operation. So, your write is successful as soon as data is written to one replica. Now, if your read request happens to go to the other replica where the data is not updated yet(could be due to high network latency or any other reason), you will end up reading the old data.
So, Cassandra is highly available but has configurable consistency levels and hence not always consistent.
In conclusion, in their default behavior, MongoDB falls under CP and Cassandra in AP.
Consistency in the CAP paradigm also includes "eventual consistency" which MongoDB supports. In a contrast to ACID systems, the read in CAP systems does not guarantee a safe return.
In simple words, this means that your Master could have an updated value, but if you do read from Slave, it does not necessarily return the updated value, and that it's okay to no have this updated value by design.
The concept of eventual consistency is explained in an excellent answer here.
By architecture, Cassandra is supposed to be consistent; it offers a special implementation of eventual consistency called the 'tunable consistency' which would meant that the client application may choose the method of handling this- it even offers multi data centre consistency support at low levels!
Most issues from row wise inconsistency in Cassandra comes from the fact that Cassandra uses client timestamps to determine which value is the most recent, and not the server side ones, which may be tad bit confusing to understand at first.
I hope this helps!
You have only to understand the "point-in-time": As you only write to mongodb master, even if slave is not updated, it is consistent, as it has all the data generated util the sync moment.
That is not true for cassandra. As cassandra uses a master-less model, there's no garantee that other nodes has all the data. At a certain time, a node can have certain recent data, and not having older data from nodes not yet synced. Cassandra will only be consistent if you stop write to all nodes and put them online. As soon the sync finished you have a consistent data.
I am using MongoDB (3.0) with a replica set of 3 servers. I experience very slow queries since a week and I have tried to find out what was wrong on my servers.
By using the db.currentOp() command I can see that queries are sometimes blocked on the secondaries when a "replication worker" is running. All the queries are waiting for lock ("waitingForLock" : true) and it seems that the replication worker has taken this lock and is running since several minutes (seems pretty long).
To be more specific about my user case, I have multiple databases in the replica set, all these database containing the same collections but not the same amount of data (I use one database per client).
I use WiredTiger as a storage engine that normally (as the doc claims) do not use global locks. So I was expecting that queries on the specific collection to be slow if this collection is updated, but I was not expecting all the queries to be slow or blocked.
Does anyone experienced the same issue? Is there some limitation with MongoDB when read are performed when processes write in the database?
Furthermore, is there a way to tell MongoDB that I don't care about consistency for read operations (in order to avoid locks)?
Thanks.
Update :
By restarting the servers the problems disappeared. It seems that memory and cpu usage was growing (but was still very low) that this lead to slow replication process which hold a lock and prevent queries execution.
I still don't understand why the we have the problem on this database. Maybe version 3.0.9 has a bug (I will upgrade to 3.0.12). Still it takes one month to the database to be very slow and only a restart of all the servers solve the problem. Our workload is mainly writes (with findAndModify). Does anyone know about a bug in Mongo where intensive write leads to performance decreasing over the time ?
I have a Go client that repeatedly inserts data into MongoDB for 1 minute. I don't want the writes to be acknowledged to the client until they are replicated to the secondary of my primary-secondary-arbiter replica set, so I specified majority write concern through the mongo shell.
However, the client's execution completes far ahead of the writes being replicated to the secondary (I'm watching the doc count to be sure). If the primary were to crash before the replication is done, data would be rolled back that--from the client's perspective--had already been acknowledged.
Doesn't this behavior contradict the majority write concern I set through the shell? Do I also need to set the write concern through the mgo driver? This article suggests I need to:
Running MongoDB Queries Concurrently With Go
We use the mgo.DialWithInfo method to create a mgo.Session object. Each session specifies a Strong or Monotonic mode, and other settings such as write concern and read preference.
But I don't see anything in the mgo driver docs about setting write concern. What am I missing?
This is what you are looking for (full documentation):
session.SetSafe(&mgo.Safe{WMode: "majority"})
We're using amazon web service for a business application which is using node.js server and mongodb as database. Currently the node.js server is runing on a EC2 medium instance. And we're keeping our mongodb database in a separate micro instance. Now we want to deploy replica set in our mongodb database, so that if the mongodb gets locked or unavailble, we still can run our database and get data from it.
So we're trying to keep each member of the replica set in separate instances, so that we can get data from the database even if the instance of the primary memeber shuts down.
Now, I want to add load balancer in the database, so that the database works fine even in huge traffic load at a time. In that case I can read balance the database by adding slaveOK config in the replicaSet. But it'll not load balance the database if there is huge traffic load for write operation in the database.
To solve this problem I got two options till now.
Option 1: I've to shard the database and keep each shard in separate instance. And under each shard there will be a reaplica set in the same instance. But there is a problem, as the shard divides the database in multiple parts, so each shard will not keep same data within it. So if one instance shuts down, we'll not be able to access the data from the shard within that instance.
To solve this problem I'm trying to divide the database in shards and each shard will have a replicaSet in separate instances. So even if one instance shuts down, we'll not face any problem. But if we've 2 shards and each shard has 3 members in the replicaSet then I need 6 aws instances. So I think it's not the optimal solution.
Option 2: We can create a master-master configuration in the mongodb, that means all the database will be primary and all will have read/write access, but I would also like them to auto-sync with each other every so often, so they all end up being clones of each other. And all these primary databases will be in separate instance. But I don't know whether mongodb supports this structure or not.
I've not got any mongodb doc/ blog for this situation. So, please suggest me what should be the best solution for this problem.
This won't be a complete answer by far, there is too many details and I could write an entire essay about this question as could many others however, since I don't have that kind of time to spare, I will add some commentary about what I see.
Now, I want to add load balancer in the database, so that the database works fine even in huge traffic load at a time.
Replica sets are not designed to work like that. If you wish to load balance you might in fact be looking for sharding which will allow you to do this.
Replication is for automatic failover.
In that case I can read balance the database by adding slaveOK config in the replicaSet.
Since, to stay up to date, your members will be getting just as many ops as the primary it seems like this might not help too much.
In reality instead of having one server with many connections queued you have many connections on many servers queueing for stale data since member consistency is eventual, not immediate unlike ACID technologies, however, that being said they are only eventually consistent by 32-odd ms which means they are not lagging enough to give decent throughput if the primary is loaded.
Since reads ARE concurrent you will get the same speed whether you are reading from the primary or secondary. I suppose you could delay a slave to create a pause of OPs but that would bring back massively stale data in return.
Not to mention that MongoDB is not multi-master as such you can only write to one node a time makes slaveOK not the most useful setting in the world any more and I have seen numerous times where 10gen themselves recommend you use sharding over this setting.
Option 2: We can create a master-master configuration in the mongodb,
This would require you own coding. At which point you may want to consider actually using a database that supports http://en.wikipedia.org/wiki/Multi-master_replication
This is since the speed you are looking for is most likely in fact in writes not reads as I discussed above.
Option 1: I've to shard the database and keep each shard in separate instance.
This is the recommended way but you have found the caveat with it. This is unfortunately something that remains unsolved that multi-master replication is supposed to solve, however, multi-master replication does add its own ship of plague rats to Europe itself and I would strongly recommend you do some serious research before you think as to whether MongoDB cannot currently service your needs.
You might be worrying about nothing really since the fsync queue is designed to deal with the IO bottleneck slowing down your writes as it would in SQL and reads are concurrent so if you plan your schema and working set right you should be able to get a massive amount of OPs.
There is in fact a linked question around here from a 10gen employee that is very good to read: https://stackoverflow.com/a/17459488/383478 and it shows just how much throughput MongoDB can achieve under load.
It will grow soon with the new document level locking that is already in dev branch.
Option 1 is the recommended way as pointed out by #Sammaye but you would not need 6 instances and can manage it with 4 instances.
Assuming you need below configuration.
2 shards (S1, S2)
1 copy for each shard (Replica set secondary) (RS1, RS2)
1 Arbiter for each shard (RA1, RA2)
You could then divide your server configuration like below.
Instance 1 : Runs : S1 (Primary Node)
Instance 2 : Runs : S2 (Primary Node)
Instance 3 : Runs : RS1 (Secondary Node S1) and RA2 (Arbiter Node S2)
Instance 4 : Runs : RS2 (Secondary Node S2) and RA1 (Arbiter Node S1)
You could run arbiter nodes along with your secondary nodes which would help you in election during fail-overs.
Replication seems to be a lot simpler than sharding, unless I am missing the benefits of what sharding is actually trying to achieve. Don't they both provide horizontal scaling?
In the context of scaling MongoDB:
replication creates additional copies of the data and allows for automatic failover to another node. Replication may help with horizontal scaling of reads if you are OK to read data that potentially isn't the latest.
sharding allows for horizontal scaling of data writes by partitioning data across multiple servers using a shard key. It's important to choose a good shard key. For example, a poor choice of shard key could lead to "hot spots" of data only being written on a single shard.
A sharded environment does add more complexity because MongoDB now has to manage distributing data and requests between shards -- additional configuration and routing processes are added to manage those aspects.
Replication and sharding are typically combined to created a sharded cluster where each shard is supported by a replica set.
From a client application point of view you also have some control in relation to the replication/sharding interaction, in particular:
Read preferences
Write concerns
Consider you have a great music collection on your hard disk, you store the music in logical order based on year of release in different folders.
You are concerned that your collection will be lost if drive fails.
So you get a new disk and occasionally copy the entire collection keeping the same folder structure.
Sharding >> Keeping your music files in different folders
Replication >> Syncing your collection to other drives
Replication is a mostly traditional master/slave setup, data is synced to backup members and if the primary fails one of them can take its place. It is a reasonably simple tool. It's primarily meant for redundancy, although you can scale reads by adding replica set members. That's a little complicated, but works very well for some apps.
Sharding sits on top of replication, usually. "Shards" in MongoDB are just replica sets with something called a "router" in front of them. Your application will connect to the router, issue queries, and it will decide which replica set (shard) to forward things on to. It's significantly more complex than a single replica set because you have the router and config servers to deal with (these keep track of what data is stored where).
If you want to scale Mongo horizontally, you'd shard. 10gen likes to call the router/config server setup auto-sharding. It's possible to do a more ghetto form of sharding where you have the app decide which DB to write to as well.
Sharding
Sharding is a technique of splitting up a large collection amongst multiple servers. When we shard, we deploy multiple mongod servers. And in the front, mongos which is a router. The application talks to this router. This router then talks to various servers, the mongods. The application and the mongos are usually co-located on the same server. We can have multiple mongos services running on the same machine. It's also recommended to keep set of multiple mongods (together called replica set), instead of one single mongod on each server. A replica set keeps the data in sync across several different instances so that if one of them goes down, we won't lose any data. Logically, each replica set can be seen as a shard. It's transparent to the application, the way MongoDB chooses to shard is we choose a shard key.
Assume, for student collection we have stdt_id as the shard key or it could be a compound key. And the mongos server, it's a range based system. So based on the stdt_id that we send as the shard key, it'll send the request to the right mongod instance.
So, what do we need to really know as a developer?
insert must include a shard key, so if it's a multi-parted shard key, we must include the entire shard key
we've to understand what the shard key is on collection itself
for an update, remove, find - if mongos is not given a shard key - then it's going to have to broadcast the request to all the different shards that cover the collection.
for an update - if we don't specify the entire shard key, we have to make it a multi update so that it knows that it needs to broadcast it
Whenever you're thinking about sharding or replication, you need to think in the context of writers/update operations. If you don't need to scale writes then replications, as it fairly simpler, is a good choice for you.
On the other hand, if you workload mostly updates/writes then at some point you'll hit a write bottleneck. If write request comes Mongo blocks other writes request. Those write request blocks until the first request will be done. If you want to scale this writes and want parallelize it then you need to implement sharding.
Just to put this somewhere...
The most basic way to run mongo is as standalone server.
You write a config (file or cli options)
initiate the server using mongod
For this picture, I didn't include the "client". Check the next one.
A replica set is a set of servers initialized exactly as above with a different config file.
To link them, we connect to one of them, and initialize the replica set mode.
They will mirror each other (in the most common configuration). This system guarantees high availability of data.
The initialization of the replica set is represented in the red border box.
Sharding is not about replicating data, but about fragmenting data.
Each fragment of data is called chunk and goes to a different shard. shard = each replica set.
"main" server, running mongos instead of mongod. This is a router for queries from the client.
Obvious: The trade-off is a more complex architecture.
Novelty: configuration server (again, a different config file).
There is much more to add, but apart from the words the pictures hold much the same.
Even mongoDB recommends to study your case carefully before going sharding. Vertical scaling (vs) is probably a good idea at least once before horizontal scaling (hs).
vs is done upgrading hardware (cpu, ram, etc). hs is needs more computers (but could be cheap computers).
Both replication and sharding can be used (individually or together) for horizontal scaling of a MongoDB installation.
Sharding is MongoDB's solution for meeting the demands of data growth. Sharding stores data records across multiple servers to provide faster throughput on read and write queries, particularly for very large data sets.
Any of the servers in the sharded cluster can respond to a read or write operation, which greatly speeds up query responses.
Replication is MongoDB's solution for providing stability, backup, and disaster recovery to a MongoDB installation. This process copies and synchronizes the replica data set across multiple servers. This prevents downtime if one server goes offline.
Any of the secondary servers can respond to read queries, but only the primary server will perform write operations. The results of the write operation will then be propagated out to the secondary servers.
Scenario 1: Fault-Tolerance
In this scenario, the user is storing billing data in a MongoDB installation. This data is mission-critical to the user's business, and needs to be available 24/7, even if a server crashes or is taken offline.
MongoDB replication is the best solution for this user. With replication, the entire data set is mirrored on multiple servers. If a server fails or is taken offline, the other servers in the cluster take over.
Scenario 2: High Performance
In this scenario, the user is running a social networking site which is run from a MongoDB database. As the social network grows, the MongoDB data set has grown along with it. The user is seeing query times and page loads increase beyond an acceptable point. It is critical that the user's MongoDB installation receives a major performance boost.
Setting up a sharded MongoDB cluster is the best solution for this user. The sharded cluster will break up the user's data set and store parts of it on separate secondary servers. Each secondary server can respond to read or write queries on its portion of the data, which greatly increases the installation's response time
MongoDB Atlas is a Database as a service in could. It support three major cloud providers such as Azure , AWS and GCP. In cloud environment , we usually talk about high availability and scalability. In Atlas “clusters”, can be either a replica set or a sharded cluster.
These two address high availability and scalability features of our cloud environment.
In general Cluster is a group of servers used to achieve a specific task. So sharded clusters are used to store data in across multiple machines to meet the demand of data growth. As the size of the data increases, a single machine may not be sufficient to store the data nor provide an acceptable read and write throughput. Sharded clusters supports the horizontal scalability of the underling cloud environment.
A replica set in MongoDB is a group of mongod processes that maintain the same data set. Replica sets provide redundancy and high availability, and are the basis for all production deployments.In a replica, one node is a primary node that receives all write operations. All other instances, such as secondaries, apply operations from the primary so that they have the same data set. Replica set mainly focus on the availability of data.
Please check the documentation
Thank You.