Matlab: changing zero-one index vector to proper index vector - matlab

Suppose an index vector in binary like below
Input
1 1 0 0 1 0 1
1 2 3 4 5 6 7
Intended output
1 2 5 7
which denotes nth number to be chosen. So I want to change 1 1 0 0 1 0 1 to 1 2 5 7, is there some easy way for this?

If you actually want to use your output to index another vector, do it directly.
You just need to transform your binary vector to logical
A = [1 1 0 0 1 0 1]; %assuming its double
B = [1 2 3 4 5 6 7];
C = B( logical(A) )
C =
1 2 5 7

The solution is using the function find(indicesBinary)

Related

Transform a matrix to a stacked vector where all zeroes after the last non-zero value per row are removed

I have a matrix with some zero values I want to erase.
a=[ 1 2 3 0 0; 1 0 1 3 2; 0 1 2 5 0]
>>a =
1 2 3 0 0
1 0 1 3 2
0 1 2 5 0
However, I want to erase only the ones after the last non-zero value of each line.
This means that I want to retain 1 2 3 from the first line, 1 0 1 3 2 from the second and 0 1 2 5 from the third.
I want to then store the remaining values in a vector. In the case of the example this would result in the vector
b=[1 2 3 1 0 1 3 2 0 1 2 5]
The only way I figured out involves a for loop that I would like to avoid:
b=[];
for ii=1:size(a,1)
l=max(find(a(ii,:)));
b=[b a(ii,1:l)];
end
Is there a way to vectorize this code?
There are many possible ways to do this, here is my approach:
arotate = a' %//rotate the matrix a by 90 degrees
b=flipud(arotate) %//flips the matrix up and down
c= flipud(cumsum(b,1)) %//cumulative sum the matrix rows -and then flip it back.
arotate(c==0)=[]
arotate =
1 2 3 1 0 1 3 2 0 1 2 5
=========================EDIT=====================
just realized cumsum can have direction parameter so this should do:
arotate = a'
b = cumsum(arotate,1,'reverse')
arotate(b==0)=[]
This direction parameter was not available on my 2010b version, but should be there for you if you are using 2013a or above.
Here's an approach using bsxfun's masking capability -
M = size(a,2); %// Save size parameter
at = a.'; %// Transpose input array, to be used for masked extraction
%// Index IDs of last non-zero for each row when looking from right side
[~,idx] = max(fliplr(a~=0),[],2);
%// Create a mask of elements that are to be picked up in a
%// transposed version of the input array using BSXFUN's broadcasting
out = at(bsxfun(#le,(1:M)',M+1-idx'))
Sample run (to showcase mask usage) -
>> a
a =
1 2 3 0 0
1 0 1 3 2
0 1 2 5 0
>> M = size(a,2);
>> at = a.';
>> [~,idx] = max(fliplr(a~=0),[],2);
>> bsxfun(#le,(1:M)',M+1-idx') %// mask to be used on transposed version
ans =
1 1 1
1 1 1
1 1 1
0 1 1
0 1 0
>> at(bsxfun(#le,(1:M)',M+1-idx')).'
ans =
1 2 3 1 0 1 3 2 0 1 2 5

Find position of vector in matrix [duplicate]

This question already has answers here:
General method to find submatrix in matlab matrix
(3 answers)
Closed 8 years ago.
I have the vector:
1 2 3
and the matrix:
4 1 2 3 5 5
9 8 7 6 3 1
1 4 7 8 2 3
I am trying to find a simple way of locating the vector [1 2 3] in my matrix.
A function returning either coordinates (Ie: (1,2:4)) or a matrix of 1s where there is a match a 0s where there isn't, Ie:
0 1 1 1 0 0
0 0 0 0 0 0
0 0 0 0 0 0
So far, the only function I've found is is 'ismember', which however only tells me if the individual components of the vector appear in the matrix. Suggestions?
Use strfind with a linearized version of the matrix, and then convert linear indices to subindices. Care should be taken to remove matches of the vector spanning different rows.
mat = [1 2 3 1 2 3 1 2;
3 0 1 2 3 5 4 4]; %// data
vec = [1 2 3]; %// data
ind = strfind(reshape(mat.',[],1).', vec);
[col row] = ind2sub(fliplr(size(mat)), ind);
keep = col<=size(mat,2)-length(vec)+1; %// remove result split across rows
row = row(keep);
col = col(keep);
Result for this example:
>> row, col
row =
1 1 2
col =
1 4 3
meaning the vector appears three times: row 1, col 1; row 1, col 4; row 2, col 3.
The result can be expressed in zero-one form as follows:
result = zeros(fliplr(size(mat)));
ind_ones = bsxfun(#plus, ind(keep).', 0:numel(vec)-1);
result(ind_ones) = 1;
result = result.';
which gives
>> result
result =
1 1 1 1 1 1 0 0
0 0 1 1 1 0 0 0
One way to get the starting location of the vector in the matrix is using colfilt:
>> A = [1 2 3 1 2 3 1 2; ...
3 0 1 2 3 5 4 4]; % matrix from Luis Mendo
>> T = [1 2 3];
>> colFun = #(x,t) all(x==repmat(t,1,size(x,2)),1);
>> B = colfilt(A,size(T),'sliding',colFun,T(:))
B =
0 1 0 0 1 0 0 0
0 0 0 1 0 0 0 0
That gives a mask of the center points, which translate to (row,col) coordinates:
>> [ii,jj]=find(B);
>> locs = bsxfun(#minus,[ii jj],floor((size(T)-1)/2))
locs =
1 1
2 3
1 4

matlab adjacency list to adjacency matrix

How to convert adjacency list to adjacency matrix via matab
For example: Here is the adjacency list(undirected), the third column is the weight.
1 2 3
1 3 4
1 4 5
2 3 4
2 5 8
2 4 7
++++++++++++++++++++++
that should be converted to:
1 2 3 4 5
1 0 4 5 0
2 3 4 7 8
3 4 7 0 0
4 0 7 0 0
5 0 8 0 0
You can use sparse matrix. Let rows be the first column, cols the second, and s the weight.
A = sparse([rows; cols],[cols; rows],[s; s]);
If you want to see the matrix. use full().
UPDATE:
I made the answer a bit simpler (everything in one line, instead of adding the transposed, and included explanations, as requested:
list = [1 2 3
1 3 4
1 4 5
2 3 4
2 5 8
2 4 7];
rows = list(:,1)
cols = list(:,2)
s = list(:,3)
Now, rows, cols and s contains the needed information. Sparse matrices need three vectors. Each row of the two first vectors, rows and cols is the index of the value given in the same row of s (which is the weight).
The sparse command assigns the value s(k) to the matrix element adj_mat(rows(k),cols(k)).
Since an adjacency matrix is symmetric, A(row,col) = A(col,row). Instead of doing [rows; cols], it is possible to first create the upper triangular matrix, and then add the transposed matrix to complete the symmetric matrix.
A = sparse([rows; cols],[cols; rows],[s; s]);
full(A)
A =
0 3 4 5 0
3 0 4 7 8
4 4 0 0 0
5 7 0 0 0
0 8 0 0 0
It's really hard to tell what your'e asking. Is this right?
list = [1 2 3
1 3 4
1 4 5
2 3 4
2 5 8
2 4 7];
matrix = zeros(max(max(list(:, 1:2)))); %// Or just zeros(5) if you know you want a 5x5 result
matrix(sub2ind(size(matrix), list(:,1), list(:,2))) = list(:,3); %// Populate the upper half
matrix = matrix + matrix' %'// Find the lower half via symmetry
matrix =
0 3 4 5 0
3 0 4 7 8
4 4 0 0 0
5 7 0 0 0
0 8 0 0 0

Matrix creation Octave / Matlab, loopless solution request

I want to create a matrix like
A = [0 0 0 0 1;
0 0 0 1 1;
0 0 0 1 1;
0 0 0 1 1;
0 0 1 1 1;
0 1 1 1 1]
based on a vector indicating how many '0's should precede '1's on each row:
B = [4 3 3 3 2 1]
Is there a loopless way to do this ?
You don't mention in your question how the horizontal size of the array should be defined (the number of ones).
For predefined width you can use this code:
width = 5;
A = cell2mat(arrayfun(#(x) [ zeros(1,x), ones(1,width-x) ], B, 'UniformOutput', false)');
If you want that A has minimal width, but still at least one 1 in every row:
A = cell2mat(arrayfun(#(x) [ zeros(1,x), ones(1,max(B)+1-x) ], B, 'UniformOutput', false)');
A shorter “old-school” way to achieve this without a loop would be as follows:
A = repmat(B',1,max(B)+1)<repmat([1:max(B)+1],size(B,2),1)
If you want to have a minimum number of ones
min_ones=1; %or whatever
A = repmat(B',1,max(B)+min_ones)<repmat([1:max(B)+min_ones],size(B,2),1)
I don’t know how this compares speedwise to #nrz’s approach (I’ve only got Octave to hand right now), but to me it's more intuitive as it’s simply comparing a max(B) + min_ones * column tiling of B:
4 4 4 4 4
3 3 3 3 3
3 3 3 3 3
3 3 3 3 3
2 2 2 2 2
1 1 1 1 1
with a row tiling of [1 : max(B) + min_ones]
1 2 3 4 5
1 2 3 4 5
1 2 3 4 5
1 2 3 4 5
1 2 3 4 5
1 2 3 4 5
To generate:
A =
0 0 0 0 1
0 0 0 1 1
0 0 0 1 1
0 0 0 1 1
0 0 1 1 1
0 1 1 1 1
This requires only one line, and seems to be faster than previous solutions based on repmat or arrayfun:
%// Example data
ncols = 5;
B = [4 3 3 3 2 1];
%// Generate A
A = bsxfun(#gt, 1:ncols, B(:));

Matlab: Search rows in matrix with fixed first and last element with vectorization

I have a matrix like the following (arbitrary cols/rows):
1 0 0 0 0
1 2 0 0 0
1 2 3 0 0
1 2 3 4 0
1 2 3 4 5
1 2 5 0 0
1 2 5 3 0
1 2 5 3 4
1 4 0 0 0
1 4 2 0 0
1 4 2 3 0
1 4 2 5 0
1 4 2 5 3
1 4 5 0 0
1 4 5 3 0
2 0 0 0 0
2 3 0 0 0
2 3 4 0 0
2 3 4 5 0
2 5 0 0 0
2 5 3 0 0
2 5 3 4 0
3 0 0 0 0
3 4 0 0 0
3 4 2 0 0
3 4 2 5 0
3 4 5 0 0
and now I want to get all rows where the first element is a certain value X and the last element (that is the last element != 0) is a certain value Y, OR turned around: the first is Y and the last is X.
Can't see any speedful code which does NOT use a for-loop :(
Thanks!
EDIT: To filter all rows with a certain first element is really easy, you don't need to help me here. So let's assume I only want to do the following: Filter all rows where the last element (i.e. the last element != 0 in each row) is either X or Y.
EDIT
Thanks a lot for your posts. I benchmarked the three possible solutions with a matrix of 473408*10 elements. Here's the benchmarkscript:
http://pastebin.com/9hEAWw9a
The results were:
t1 = 2.9425 Jonas
t2 = 0.0999 Brendan
t3 = 0.0951 Oli
So thanks a lot you guys, I'm sticking with Oli's solution and thus accept it. Thanks though for all the other solutions!
All you need to do is to find the linear indices of the last non-zero element of every row. The rest is easy:
[nRows,nCols] = size(A);
[u,v] = find(A); %# find all non-zero elements in A
%# for each row, find the highest column index with accumarray
%# and convert to linear index with sub2ind
lastIdx = sub2ind([nRows,nCols],(1:nRows)',accumarray(u,v,[nRows,1],#max,NaN));
To filter rows, you can then write
goodRows = A(:,1) == X & A(lastIdx) == Y
Here is a trick: Look for numbers with a 0 on the right, and sum them all:
H=[1 2 0 0 0;
2 3 1 0 0;
4 5 8 0 0;
8 5 4 2 2];
lastNumber=sum(H.*[H(:,2:end)==0 true(size(H,1),1)],2)
ans =
2
1
8
2
The rest is easy:
firstNumber=H(:,1);
find( (firstNumber==f) & (lastNumber==l) )
This works only if the numbers in each row are x number of non-zeros followed by a series of zeros. i.e. it will not work if the following is possible 1 0 3 4 0 0, I assume that isn't possible based on the sample input you gave ...
% 'a' is your array
[nx, ny] = size(a);
inds = [0:ny:ny*(nx-1)]' + sum(a ~= 0, 2);
% Needs to transpose so that the indexing reads left-to-right
aT = a';
valid1 = aT(inds) == Y;
valid2 = a(:,1) == X;
valid = valid1 & valid2;
valid_rows = a(valid,:);
This is messy I know ...