Error building doxygen1.8.6 - doxygen

Just got the latest duoxygen 1.8.6 on Linux
Currently have 1.8.5 installed. It build fine.
With 1.8.6 am gettign the following error:
gmake[2]: Entering directory `/home/build/doxygen/doxygen-1.8.6/src'
/usr/bin/flex -PconfigYY -t config.l >config.cpp
g++ -c -pipe -fsigned-char -D_LARGEFILE_SOURCE -Wall -W -O2 -I../qtools -o ../objects/config.o config.cpp
config.l: In member function bool Config::parse(const char*):
config.l:1692: error: configYY_flex_debug was not declared in this scope
gmake[2]: *** [../objects/config.o] Error 1
Any help appreciated

With release 1.8.6 a newer version of flex is required to build doxygen. Try version 2.5.35 or later.
See also https://bugzilla.gnome.org/show_bug.cgi?id=719525

Related

Failed to compile and install postgreSQL V11 on macOS

I downloaded postgreSQL V11 source code through github, but failed to compile and install it on macOS. This worked one month ago.
Here are the error messages:
gcc -Wall -Wmissing-prototypes -Wpointer-arith -Wdeclaration-after-statement -Werror=vla -Wendif-labels -Wmissing-format-attribute -Wformat-security -fno-strict-aliasing -fwrapv -Wno-unused-command-line-argument -O2 zic.o -L../../src/port -L../../src/common -Wl,-dead_strip_dylibs -lpgcommon -lpgport -lz -lreadline -lm -o zic
ld: warning: ld: warning: ignoring file ../../src/common/libpgcommon.a, file was built for archive which is not the architecture being linked (x86_64): ../../src/common/libpgcommon.aignoring file ../../src/port/libpgport.a, file was built for archive which is not the architecture being linked (x86_64): ../../src/port/libpgport.a**
I searched on line but failed to find any useful information. Any idea for this? Thanks.
Finally I found the reason why postgreSQL v11 cannot be installed through source package on Mac.
I thought this issue should be simple, however, it is not.
It seems like the compiler is using the GNU ar(1)/ranlib(1) instead of the ones supplied by the Xcode toolchain.
So you need to run which -a ar and which -a ranlib to see the what you have in $PATH.
Then you can solve the problem based on the detailed answer in Static library built for archive which is not the architecture being linked (x86_64)

Trying to install pymongo on ubuntu 12.04

Background Information:
Hi there. I'm trying to get mongodb and python (2.7.8) working on my ubuntu 12.04 box.
I've got mongodb installed and running...
I *think I have python set up too. Now I'm trying to install pymongo.
Problem
When I try to install pymongo, this is what i get:
me#mydev:~/Documents/Python-2.7.8$ pip install pymongo
Downloading/unpacking pymongo
Cannot fetch index base URL http://pypi.python.org/simple/
Could not find any downloads that satisfy the requirement pymongo
No distributions at all found for pymongo
Storing complete log in /home/me/.pip/pip.log
me#mydev:~/Documents/Python-2.7.8$
The log file pip.log looks like this: http://pastebin.com/15wv38kf
Based on the logs, tt *seems like I need to update the repositories to look for the package in a different URL... but I'm not sure what library / url to add.
Other things I've tested / checked:
Retrieved updated package list:
sudo apt-get update
Proved that python 2.7.8 is installed:
me#medev:~/Documents/Python-2.7.8$ python
Python 2.7.8 (default, Nov 5 2014, 15:18:10)
[GCC 4.6.3] on linux2
Type "help", "copyright", "credits" or "license" for more information.
>>>
Proved that PIP is installed:
me#medev:~/Documents/Python-2.7.8$ pip
Usage: pip COMMAND [OPTIONS]
pip: error: You must give a command (use "pip help" to see a list of commands)
me#medev:~/Documents/Python-2.7.8$
Proved that mongodb is installed (but apparently not setup properly!):
me#medev:~/Documents/Python-2.7.8$ mongo
MongoDB shell version: 2.6.5
connecting to: test
2014-11-06T08:23:47.444-0500 warning: Failed to connect to 127.0.0.1:27017, reason: errno:111 Connection refused
2014-11-06T08:23:47.444-0500 Error: couldn't connect to server 127.0.0.1:27017 (127.0.0.1), connection attempt failed at src/mongo/shell/mongo.js:146
exception: connect failed
me#medev:~/Documents/Python-2.7.8$
Any suggestions would be appreciated.
EDIT 1
I tried to just install using the package manager as suggested, but that doesn't seem to work. Please see the results at: http://pastebin.com/V56KXzFT
Perhaps my test to prove pymongo is installed is faulty?
EDIT 2
I can't remember now but I think by default Ubuntu 12.0.4 comes with python 2.7.3 or something like that. But I'm doing a course, and it requires 2.7.8.
Initially, I downloaded a zip file for python 2.7.6 and saved it in my Documents folder...
I extracted it and ran
./compile
make
make install
then I realized that I needed 2.7.8 and so I did the same thing. Downloaded the zip ... and
compiled.
This is the link that I used as a reference to install 2.7.8:
https://askubuntu.com/questions/101591/how-do-i-install-python-2-7-2-on-ubuntu
Could this be related to the issue?
"pip install pymongo" works fine on my Linux box:
$ sudo pip install pymongo
Downloading/unpacking pymongo
Downloading pymongo-2.7.2.tar.gz (381kB): 381kB downloaded
Running setup.py (path:/tmp/pip_build_root/pymongo/setup.py) egg_info for package pymongo
Installing collected packages: pymongo
Running setup.py install for pymongo
building 'bson._cbson' extension
gcc -pthread -fno-strict-aliasing -g -O2 -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -fPIC -Ibson -I/usr/local/include/python2.7 -c bson/_cbsonmodule.c -o build/temp.linux-x86_64-2.7/bson/_cbsonmodule.o
gcc -pthread -fno-strict-aliasing -g -O2 -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -fPIC -Ibson -I/usr/local/include/python2.7 -c bson/time64.c -o build/temp.linux-x86_64-2.7/bson/time64.o
gcc -pthread -fno-strict-aliasing -g -O2 -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -fPIC -Ibson -I/usr/local/include/python2.7 -c bson/buffer.c -o build/temp.linux-x86_64-2.7/bson/buffer.o
gcc -pthread -fno-strict-aliasing -g -O2 -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -fPIC -Ibson -I/usr/local/include/python2.7 -c bson/encoding_helpers.c -o build/temp.linux-x86_64-2.7/bson/encoding_helpers.o
gcc -pthread -shared -Wl,-rpath /usr/local/lib build/temp.linux-x86_64-2.7/bson/_cbsonmodule.o build/temp.linux-x86_64-2.7/bson/time64.o build/temp.linux-x86_64-2.7/bson/buffer.o build/temp.linux-x86_64-2.7/bson/encoding_helpers.o -L/usr/local/lib -lpython2.7 -o build/lib.linux-x86_64-2.7/bson/_cbson.so
building 'pymongo._cmessage' extension
< ... snip ... >
Successfully installed pymongo
Cleaning up...
I'd guess it failed for you because, perhaps, you first must upgrade "pip" itself.
I notice you've tried various methods of installing PyMongo, and some methods work but when you do "import pymongo" in Python it fails. Here, I guess that you have multiple version of Python installed, and that your default Python is different from the system Python for which PyMongo was installed.

Scons in Mongodb

When i run scons --ssl all, it throws an error:
g++ -o build/linux2/release/ssl/mongo/util/net/ssl_manager.o -c
-Wnon-virtual-dtor -Woverloaded-virtual -fPIC -fno-strict-aliasing -ggdb -pthread -Wno-unknown-pragmas -Winvalid-pch -pipe -fno-builtin-memcmp -O3 -DBOOST_ALL_NO_LIB -D_SCONS -DMONGO_EXPOSE_MACROS -DSUPPORT_UTF8 -D_FILE_OFFSET_BITS=64 -DMONGO_SSL -DMONGO_HAVE_HEADER_UNISTD_H -DMONGO_HAVE_EXECINFO_BACKTRACE -DNETSNMP_NO_INLINE -Ibuild/linux2/release/ssl/third_party/libstemmer_c/include -Isrc/third_party/libstemmer_c/include -Ibuild/linux2/release/ssl/third_party/s2 -Isrc/third_party/s2 -Ibuild/linux2/release/ssl/third_party/boost -Isrc/third_party/boost -Ibuild/linux2/release/ssl/third_party/pcre-8.30 -Isrc/third_party/pcre-8.30 -Ibuild/linux2/release/ssl -Isrc -Ibuild/linux2/release/ssl/mongo -Isrc/mongo -Ibuild/linux2/release/ssl/third_party/s2 -Isrc/third_party/s2 -Ibuild/linux2/release/ssl/third_party/snappy -Isrc/third_party/snappy -Ibuild/linux2/release/ssl/third_party/v8/include -Isrc/third_party/v8/include src/mongo/util/net/ssl_manager.cpp
src/mongo/util/net/ssl_manager.cpp: In member function 'void
mongo::SSLManager::_setupFIPS()':
src/mongo/util/net/ssl_manager.cpp:187: error: 'FIPS_mode_set' was not
declared in this scope scons: *
[build/linux2/release/ssl/mongo/util/net/ssl_manager.o] Error 1 scons:
building terminated because of errors.
How to fix this issue. Using Ubuntu 12.04
To address this error make sure that you have a version of OpenSSL installed that defines FIPS_mode_set. Some versions of 0.9.8 for example don't. Upgrading to 1.0.1 should address.
If you are already on 1.0.1 make sure that correct OpenSSL headers and libraries are being used by scons. You can set explicitly by adding the include and lib paths as a command line arguments, as follows:
scons --ssl --cpppath /usr/local/openssl/1.0.1e/include --libpath /usr/local/openssl/1.0.1e/lib all
Where the paths provided are the actual paths of your OpenSSL include and libraries.
For those who have the same issue with OSX on Mac. Here is what you need to include:
scons --ssl --cpppath=/usr/local/opt/openssl/include --libpath=/usr/local/opt/openssl/lib all
assuming you've downloaded openssl with brew
brew install openssl

Compiling a dll with mingw and eclipse

I want to write a tool to capture and visualize pressed keys in a specific application so I searched for a sample source.
My result was this:
http://www.codeguru.com/cpp/w-p/system/keyboard/article.php/c5699
But it doesn't work yet. Here's my approach:
I have imported the sources as makefile project in Elipse (Helios, CDT Version 7.0.0.201006141710) using Mingw 4.6.1 as toolchain.
In keydll3.cpp I added the line
#define KEYDLL3_EXPORTS
to tell the preprocessor that i want to export the dll functions.
Now when I try to compile the project, the following errors occour:
**** Internal Builder is used for build ****
g++ -shared -DBUILDING_EXAMPLE_DLL -IC:\MinGW\include -IC:\MinGW\lib\gcc\mingw32\4.6.1\include\c++ -O2 -g -Wall -c -fmessage-length=0 -oStdAfx.o ..\StdAfx.cpp
g++ -shared -DBUILDING_EXAMPLE_DLL -IC:\MinGW\include -IC:\MinGW\lib\gcc\mingw32\4.6.1\include\c++ -O2 -g -Wall -c -fmessage-length=0 -okeydll3.o ..\keydll3.cpp
..\keydll3.cpp:31:0: warning: ignoring #pragma data_seg [-Wunknown-pragmas]
..\keydll3.cpp:34:0: warning: ignoring #pragma data_seg [-Wunknown-pragmas]
..\keydll3.cpp:36:0: warning: ignoring #pragma comment [-Wunknown-pragmas]
g++ -okeydll3 keydll3.o StdAfx.o
c:/mingw/bin/../lib/gcc/mingw32/4.6.1/../../../libmingw32.a(main.o): In function `main':
C:\MinGW\msys\1.0\src\mingwrt/../mingw/main.c:73: undefined reference to `WinMain#16'
collect2: ld returned 1 exit status
Build error occurred, build is stopped
It seems that the compiler misses the winmain statement because he assume it's a windows application. But a dll isn't.
It also seems that the "-share" option has no effect.
So how do I tell the compiler that my code is a dll with some Windows API calls?
If there's another example which works without visual studio let me know.
Thanks in advance for your contributions.
Noir
You've added the -shared option in the wrong place. It needs to be added to the linker flags, not to the compiler flags. Your commands should look like this.
g++ -DBUILDING_EXAMPLE_DLL -IC:\MinGW\include -IC:\MinGW\lib\gcc\mingw32\4.6.1\include\c++ -O2 -g -Wall -c -fmessage-length=0 -oStdAfx.o ..\StdAfx.cpp
g++ -DBUILDING_EXAMPLE_DLL -IC:\MinGW\include -IC:\MinGW\lib\gcc\mingw32\4.6.1\include\c++ -O2 -g -Wall -c -fmessage-length=0 -okeydll3.o ..\keydll3.cpp
g++ -shared -okeydll3 keydll3.o StdAfx.o

Unable to install the Crypt-SSLeay module

I'm creating a web application that requires the use of the perl module Crypt-SSLeay. This module has a dependency of needing OpenSSL headers. Since my Linux server has neither I went through these steps to install, but I'm receiving an error that's hard to understand (see below) because of my limited experience.
Server Information:
Running Oracle Enterprise Linux
Linux version 2.6.18-194.11.4.0.1.el5 (mockbuild#ca-build9.us.oracle.com) (gcc version 4.1.2 20080704 (Red Hat 4.1.2-48))
Steps to replicate the issue:
Downloaded and extracted openssl 0.9.8r from here and ran the following commands (after going to the directory)
./config --openssldir=/usr/local/openssl
make
make test
sudo make install
Downloaded and extracted the Crypt-SSLeay module from here and then ran the following commands (after going to the directory)
perl Makefile.PL
make
I receive the following error after I run "make":
BUILD INFORMATION
================================================
ssl library: OpenSSL 0.9.8r in /usr/local/openssl
ssl header: openssl/ssl.h
libraries: -L/usr/local/openssl/lib -lssl -lcrypto -lgcc
include dir: -I/usr/local/openssl/include
================================================
Note (probably harmless): No library found for -lgcc
Writing Makefile for Crypt::SSLeay
The test suite can attempt to connect to public servers
to ensure that the code is working properly. If you are
behind a strict firewall or have no network connectivity,
these tests may fail (through no fault of the code).
Do you want to run the live tests (y/N)? [N]
-bash-3.2$ make
gcc -c -I/usr/local/openssl/include -D_REENTRANT -D_GNU_SOURCE -fno-strict-aliasing -pipe -Wdeclaration-after-statement -I/usr/local/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -I/usr/include/gdbm -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -DVERSION=\"0.58\" -DXS_VERSION=\"0.58\" -fPIC "-I/usr/lib64/perl5/5.8.8/x86_64-linux-thread-multi/CORE" SSLeay.c
SSLeay.c: In function ‘XS_Crypt__SSLeay__CTX_new’:
SSLeay.c:118: warning: unused variable ‘packname’
SSLeay.c: In function ‘XS_Crypt__SSLeay__Conn_new’:
SSLeay.c:395: warning: unused variable ‘packname’
SSLeay.c: In function ‘XS_Crypt__SSLeay__CTX_use_pkcs12_file’:
SSLeay.c:287: warning: ‘RETVAL’ may be used uninitialized in this function
Running Mkbootstrap for Crypt::SSLeay ()
chmod 644 SSLeay.bs
rm -f blib/arch/auto/Crypt/SSLeay/SSLeay.so
gcc -shared -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic SSLeay.o -o blib/arch/auto/Crypt/SSLeay/SSLeay.so \
-L/usr/local/openssl/lib -lssl -lcrypto \
/usr/bin/ld: /usr/local/openssl/lib/libssl.a(s2_clnt.o): relocation R_X86_64_32 against `a local symbol' can not be used when making a shared object; recompile with -fPIC
/usr/local/openssl/lib/libssl.a: could not read symbols: Bad value
collect2: ld returned 1 exit status
make: *** [blib/arch/auto/Crypt/SSLeay/SSLeay.so] Error 1
I'm not sure what I need to do when I recompile OpenSSL to get this module to work. Any help appreciated.
That looks like an error in the OpenSSL build itself. Are you sure your distribution doesn't provide the OpenSSL headers? (And i'm sure you already had the libraries, right?)
The headers are in a package called "openssl-devel" on RedHat IIRC, should be the same for Oracle Enterprise Linux (I guess, never used that).
If you do find the headers in your distro's packages, don't forget to un-install your custom build (remove the files manually if the OpenSSL Makefile doesn't have an uninstall target).