I have a program I've been working on for ages. I haven't updated it since May 12th. When I run it today I get errors:
gsh#localhost 2014-05-08]$ ./kaplan.py
/usr/lib64/python2.6/site-packages/numpy/oldnumeric/__init__.py:11: ModuleDeprecationWarning: The oldnumeric module will be dropped in Numpy 1.9
warnings.warn(_msg, ModuleDeprecationWarning)
Traceback (most recent call last):
File "./kaplan.py", line 6, in <module>
from scipy import interpolate, constants
File "/usr/lib64/python2.6/site-packages/scipy/interpolate/__init__.py", line 15, in <module>
from polyint import *
File "/usr/lib64/python2.6/site-packages/scipy/interpolate/polyint.py", line 2, in <module>
from scipy import factorial
ImportError: cannot import name factorial
I'm running Redhat 6.5 workstation. I think redhat broke scipy sometime between May 12th and now. Does it look like I am correct, or is something else perhaps wrong?
Related
i just installed pytest and i tried using it and it was giving me errors. i uninstalled it and installed it again and it was giving me the same errors as i tried importing it
import pytest
Traceback (most recent call last):
File "C:/Users/user/AppData/Roaming/JetBrains/PyCharmCE2021.1/scratches/scratch_1.py", line 1, in <module>
import pytest
File "C:\Users\user\AppData\Local\Programs\Python\Python38-32\lib\site-packages\pytest\__init__.py", line 7, in <module>
from _pytest.assertion import register_assert_rewrite
File "C:\Users\user\AppData\Local\Programs\Python\Python38-32\lib\site-packages\_pytest\assertion\__init__.py", line 10, in <module>
from _pytest.assertion import rewrite
File "C:\Users\user\AppData\Local\Programs\Python\Python38-32\lib\site-packages\_pytest\assertion\rewrite.py", line 26, in <module>
import py
File "C:\Users\user\AppData\Local\Programs\Python\Python38-32\lib\site-packages\py\__init__.py", line 14, in <module>
from py._vendored_packages import apipkg
File "C:\Users\user\AppData\Local\Programs\Python\Python38-32\lib\site-packages\py\_vendored_packages\apipkg\__init__.py", line 12, in <module>
from .version import version as __version__
ValueError: source code string cannot contain null bytes
can you please help me with what to do, or suggest another library just like pytest where i test my applications.
Thanks for your contribution
check if you installed pytest in the same pyenv you are using. Run pip list comand and check there is pytest there
It might be issue with environment in pyenv. Try to create new one. In PyCharm it is File -> Settings -> Project -> Python Interpreter -> Add
The bug happens when I try to import Tensorflow on Eclipse. Tensorflow can
be imported when I directly run the python code without using IDEs (I test it and it works perfectly). I've also tested my codes on PyCharm, it's fine with Pycharm....
I've tested the LD_LIBRARY_PATH,PATH,CUDA_HOME variables with echo. I also tried to directly append the cuda libraries into the Ecplipse pydev interpreter setting. So it is really confusing me. I did face a similar question with another machine, but I solved it by modifying the ~/.bashrc file.
I'm using Ubuntu16.04, python2.7,eclipse Neon3, GTX1080ti.
Any ideas? Following is the bug information:
Traceback (most recent call last): File "/home/zernmern/workspace/test/p1/test.py", line 2, in <module>
import tensorflow as tf
File "/home/zernmern/.local/lib/python2.7/site-packages/tensorflow/__init__.py", line 24, in <module>
from tensorflow.python import *
File "/home/zernmern/.local/lib/python2.7/site-packages/tensorflow/python/__init__.py", line 49, in <module>
from tensorflow.python import pywrap_tensorflow
File "/home/zernmern/.local/lib/python2.7/site-packages/tensorflow/python/pywrap_tensorflow.py", line 52, in <module>
raise ImportError(msg)
ImportError: Traceback (most recent call last):
File "/home/zernmern/.local/lib/python2.7/site-packages/tensorflow/python/pywrap_tensorflow.py", line 41, in <module>
from tensorflow.python.pywrap_tensorflow_internal import *
File "/home/zernmern/.local/lib/python2.7/site-packages/tensorflow/python/pywrap_tensorflow_internal.py", line 28, in <module>
_pywrap_tensorflow_internal = swig_import_helper()
File "/home/zernmern/.local/lib/python2.7/site-packages/tensorflow/python/pywrap_tensorflow_internal.py", line 24, in
swig_import_helper_mod = imp.load_module('_pywrap_tensorflow_internal', fp, pathname, description)
ImportError: libcusolver.so.8.0: cannot open shared object file: No such file or directory
Failed to load the native TensorFlow runtime.
Please let me know if more information is needed xD.
Ubuntu 16.04 uses Python 3.5 as the default system version of Python. You say that you are using Python 2.7. Did you install that yourself? It doesn't come with the OS. (And if you don't have a compelling reason to stay with Python 2.7, I would encourage you to switch to Py 3.x anyway, especially since you're working with a cutting-edge package like TensorFlow.)
Once you have two versions of Python on your system, it's easy to lose track of which packages you installed to which version of Python. I would check to see whether you happen to have installed TensorFlow, or parts of it, to the system Python 3.5 instead of your Python 2.7.
Finally, I find the solution from 'PyCharm cannot find library'
As the user 'Laizer' suggested:
The issue is that PyCharm(Here is Eclipse) was invoked from the desktop, and wasn't getting the right environment variables. Solution is to either:
invoke from the command line(i.e. Directly start eclipse by sh),
create a script to set environment and then invoke, and make a link to that script on the desktop,
or set environment variables on the desktop item
I want to import ee.mapclient
but when I do this the following error is returned:
Traceback (most recent call last):
File "<ipython-input-16-5f312fd5c732>", line 1, in <module>
import ee.mapclient
File "C:\Users\Stefano\Anaconda2_2\lib\site-packages\ee\mapclient.py", line 43, in <module>
import ImageTk # pylint: disable=g-import-not-at-top
ImportError: No module named ImageTk
I am using anaconda and have installed pillow and PIL. Within my PIL folder in site-packages there is a file caled ImageTk.
When I do this:
from PIL import Image, ImageTk
everything imports fine, but for some reason ee.mapclient is not recognizing this.
A link to the python code used in mapclient.py can be found here:
https://github.com/google/earthengine-api/blob/master/python/ee/mapclient.py
Edit mapclient to put "from PIL import Image,ImageTk " in try block ,
I'm having trouble compiling an exe while using cx_freeze and scipy. In particular, my script uses
from scipy.interpolate import griddata
The build process seems to complete successfully, however when I try to run the compiled exe, I get the following message.
Traceback (most recent call last):
File "C:\Python27\lib\site-packages\cx_Freeze\initscripts\Console.py", line 27, in <module>
exec(code, m.__dict__)
File "gis_helper.py", line 13, in <module>
File "C:\Python27\lib\site-packages\scipy\__init__.py", line 103, in <module>
raise ImportError(msg)
ImportError: Error importing scipy: you cannot import scipy while
being in scipy source directory; please exit the scipy source
tree first, and relaunch your python intepreter.
After looking at scipy\ _init__.py file, there is the following:
if __SCIPY_SETUP__:
import sys as _sys
_sys.stderr.write('Running from scipy source directory.\n')
del _sys
else:
try:
from scipy.__config__ import show as show_config
except ImportError:
msg = """Error importing scipy: you cannot import scipy while
being in scipy source directory; please exit the scipy source
tree first, and relaunch your python intepreter."""
raise ImportError(msg)
I'm not entirely sure what is the problem here however although it seems that the erros is being thrown because there is a problem with the scipy config file. Possibly not being included in the build process. I'm quite a novice and hoping someone more experienced with generating build using cxfreeze can shed some light on this.
Incidentally, the scipy in use was installed from binaries here.
i have had the same issue. I added this code to the setup.py generated by cx_freeze:
import scipy
includefiles_list=[]
scipy_path = dirname(scipy.__file__)
includefiles_list.append(scipy_path)
Then, used includefiles_list as part of the build_exe parameter:
build_options = dict(packages=[], include_files=includefiles_list)
setup(name="foo", options=dict(build_exe=build_options))
I add the same problem and solved it using fepzzz method and including some missing packages:
additional_mods = ['numpy.matlib', 'multiprocessing.process']
includefiles = [(r'C:\Anaconda3\Lib\site-packages\scipy')]
setup(xxx, options={'build_exe': {'includes': additional_mods, 'include_files': includefiles}})
And using version 5.0.2 of cx-Freeze package, which solved an error when importing multiprocessing.process
I recently installed python 3.4 using this custom installation guide, the system had python 2.6 as default. Today i needed to install tldextract to python2.6
I did that using pip pip2.6 install tldextract but after i tried to import the module the import failed with this error.
Traceback (most recent call last):
File "process.py", line 12, in <module>
import tldextract
File "/usr/lib/python2.6/site-packages/tldextract/__init__.py", line 1, in <module>
from .tldextract import extract, TLDExtract
File "/usr/lib/python2.6/site-packages/tldextract/tldextract.py", line 70, in <module>
from urllib.request import urlopen
ImportError: No module named request
That seems to be the python3.4 version of tldextract since it is trying to find the request module in urllib. So i guess pip installed the wrong version of the module, how can i fix this? Or remove python 3.4 alltogether.
tldextract has the following code block in the source repo, and the line numbers match:
try: # pragma: no cover
# Python 2
from urllib2 import urlopen
from urlparse import scheme_chars
unicode = unicode
except ImportError: # pragma: no cover
# Python 3
from urllib.request import urlopen
So it looks like the Python 2 branch is throwing an exception for some unknown reason and it's failing over to Python 3. I would start by looking why that might be.