I want to visualize my tree in a nicer layout GraphViz, but for some reason it doesn't show the tree at all even though it does show in the default layout.
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I am trying to create something like this in flutter:
Image 1 -
Image 2
The two main aspects are:
the filled part of the vertical container has this elipse with darker color on the top, which gives the 3d depth effect
on Image 2 there is that % indicator, moving accordingly
What I have tried is:
tried to modify different progress_indicator packages, so that to achieve the 2 things above. However, I was never able to do that 3d depth effect.
tried to implement it as 2 expanded containers, where the flex of the bottom one represents the persentage. However again I was not able to do the elipse on the top.
From my searches online, it looks like I need to use the CustomPaint class, but it look very complicated.
If you have any better suggestions, or ever code pieces that can help, I would be extremely thankful !
I'm working on generating some figures for a paper from a simulink model, and would prefer to use minimal work to produce them so I'm trying to configure a simulink scope to output the figures I want on its own. The problem is, while I can get colors and such all arranged well, I can't seem to figure out how to modify the spacing between the graphs in a scope showing multiple signals. What I have now looks like the below:
Notice how the two plots have different vertical scales (probably a consequence of having the time scale only on the bottom one), and that there's a large gap of unused space between the plots. This is a concern when trying to publish in a journal, since page space is at a premium and we need to make the information as dense as possible.
So, how can I tweak these margins and formatting? I've tried looking at all the settings I can find, but none seem to affect these parameters.
I need to draw a map of the core metabolism of E.coli. Associated with each reaction in the map I have a number that indicates the flux through this reaction. I want the map to reflect these fluxes through the color of each reaction in the map.
I have tried using tools like Mathematica and Cytoscape, but it is very hard to get a nice layout of the metabolic network. I have seen maps of E.coli metabolism which look very nice on paper. What I need is a map like these, but where I can define the colors of the reactions.
There are some tools available, for example, metdraw.com. But when I upload my E.coli SBML model, the plot layout is a disaster. There used to be a web IPython notebook that one could use for some prebuilt models, where you just had to input the reaction fluxes. But now it's gone: http://nbviewer.ipython.org/github/opencobra/cobrapy/blob/master/documentation_builder/visbio.ipynb
See the image below for an example. Forget about the yellow bounding boxes delimiting compartments. I can spare those.
Some tracking of the broken link you posted brings me to Escher, which appears to be what visbio is now called:
https://github.com/zakandrewking/escher
For example see:
https://cobrapy.readthedocs.org/en/latest/escher.html
Escher is part of Cobrapy:
http://opencobra.github.io/cobrapy/
A software suite to model biological networks.
I'm quite new to GXT. Is there a widget that is similar to a GWT native FlexTable with GXT?
Something that can display a widget in a grid fashion, set by something like setWidget(int row, int col) ?
I tried inserting a FlexTable in a LayoutContainer however it does not render properly. My requirement is not like a table grid with data, but much like a "grid panel" that will display widgets in a grid way.
I might compare your 'chessboard' with a spreadsheet - the rows/columns dont have particular meaning/data/widths/headers, symmetry and flexibility is what is important. In contrast, GXT's Grid (and GWT's CellTable, DataTable) is designed more like a database, where each column has particular meaning, and almost always a fixed (but somewhat flexible) number of columns, but the row count can grow.
I'd look into GWT's own FlexTable or Grid. If it doesn't work correctly with GXT 2's LayoutContainer, make sure you either add it before the LayoutContainer is added to a parent, or call layout() after adding it to be sure it is drawn.
Drawing a chessboard style grid with widgets means you are drawing a lot of widgets, which isn't going to be terribly fast/efficient. If you don't actually need widgets, but cells will suffice, I'd look into making a cell widget that draws the same cell over and over for a number of rows/columns, but with the specific data you need for each position.
If you have code that almost works, SO allows that to be posted, to perhaps discuss what you are doing, and how it might be done differently.
This is a GWT question.
I need to create a hierarchical view of a data set. Let me describe what this hierarchical view is supposed to be:
Lay down a rectangle that is 640 by 480 pixels on your screen.
Now embed 4 rectangles inside the rectangle from the previous step.
The 4 rectangles shall evenly take up the space from the enclosing rectangle.
Continue recursively embedding 4 rectangles inside each 4 rectangle...
So on and so forth until a stop condition (like stop recursing at level N).
I plan on doing this with GWT's CellTable. I know how to make a CellTable out of the various out-of-the-box Cell's (what I mean to say is: all the classes that implement the Cell interface ).
But I can't figure out how to make a CellTable of Widgets... or a CellTable of CellTables. I guess my question boils down to... How would you make a new Cell type that is: WidgetCell or CellTableCell?
UPDATE:
I found an answer that describes how to make a Cell out of a Widget: how-can-i-put-a-widget-in-a-celltable-cell
Given the above answer, is my original idea of making a CellTable out of CellTables practically feasible? Is there a more elegant solution? Am I on the right-track?
CellTables do not support widgets. Grid or FlexTable might work better for you, since they do accept widgets - you could make a Grid of CellTables, for instance. Unfortunately, there is no built-in solution that accepts widgets and provides paging.