Building Swift on CentOS - swift

I am building Swift compiler from source on CentOS 6, and am running into a library issue. After fighting with the build script for a while I have got where running ./utils/build-script eventually gives:
+ /home/src/cmake-3.4.1-Linux-x86_64/bin/cmake --build /home/src/swift/build/Ninja-DebugAssert/cmark-linux-x86_64 -- all
ninja: no work to do.
llvm: using standard linker
+ cd /home/src/swift/build/Ninja-DebugAssert/llvm-linux-x86_64
+ /home/src/cmake-3.4.1-Linux-x86_64/bin/cmake -G Ninja -DCMAKE_C_COMPILER:PATH=clang -DCMAKE_CXX_COMPILER:PATH=clang++ '-DCMAKE_C_FLAGS= ' '-DCMAKE_CXX_FLAGS= ' -DCMAKE_BUILD_TYPE:STRING=Debug -DLLVM_ENABLE_ASSERTIONS:BOOL=TRUE -DLLVM_TOOL_SWIFT_BUILD:BOOL=NO '-DLLVM_TARGETS_TO_BUILD=X86;ARM;AArch64' -DLLVM_INCLUDE_TESTS:BOOL=TRUE -LLVM_INCLUDE_DOCS:BOOL=TRUE -DCMAKE_INSTALL_PREFIX:PATH=/usr -DINTERNAL_INSTALL_PREFIX=local /home/src/swift/llvm
CMake Error at cmake/modules/CheckAtomic.cmake:36 (message):
Host compiler appears to require libatomic, but cannot find it.
Call Stack (most recent call first):
cmake/config-ix.cmake:296 (include)
CMakeLists.txt:403 (include)
-- Configuring incomplete, errors occurred!
See also "/home/src/swift/build/Ninja-DebugAssert/llvm-linux-x86_64/CMakeFiles/CMakeOutput.log".
See also "/home/src/swift/build/Ninja-DebugAssert/llvm-linux-x86_64/CMakeFiles/CMakeError.log".
./utils/build-script: command terminated with a non-zero exit status 1, aborting
(gcc-4.8.2 was what I compiled llvm with)
libatomic is there:
$ locate libatomic
/opt/gcc-4.8.2/lib64/libatomic.a
/opt/gcc-4.8.2/lib64/libatomic.la
/opt/gcc-4.8.2/lib64/libatomic.so
/opt/gcc-4.8.2/lib64/libatomic.so.1
/opt/gcc-4.8.2/lib64/libatomic.so.1.0.0
I just don't know how to tell the build system where to look. I have tried the usual CMAKE_LIBRARY_PATH (exporting on the command line - I am not sure if cmake works like the way LD_LIBRARY_PATH, LIBRARY_PATH work) but it can't seem to find it.
I also don't have root on the machine.

I had not tried building from source on CentOS 6 until I saw this question, but I have been able to build Swift 2.2 on CentOS 7.1 and Ubuntu 14.04, with partial success. A few things to think about:
You will need numerous dependencies required to build Swift, and unless
they happen to be already on the system, you will need root access to
install them.
Use -R flag with the build-script to create a release build.
Building in DebugAssert (the default) will require a lot of memory. In my case even 14 GB was not sufficient. A release build
can be done with about 6 GB.
As for your specific problem, it is related to Clang's dependency on GCC-related packages for headers and libraries. See, for example, Fedora 21 with clang, without gcc.
Even if you installed GCC 4.8.2 and adjusted the path to use gcc and g++ from 4.8.2, Clang may still be looking in the old GCC directories for headers and libraries. CMake first tries to compile a C++ test file that includes the header atomic, which does not exist in the old GCC. So, it then tries to link a C test program that uses the library libatomic, which again doesn't exist in the old GCC. You can see this by looking at llvm/cmake/modules/CheckAtomic.cmake mentioned by usr1234567. CMakeError.log and CMakeOutput.log can also provide valuable insight. BTW, when I was building Swift on CentOS 7.1, I didn't run into this problem because GCC 4.8.2 was used by Clang for headers and libraries and the atomic header was found, so the C++ file got compiled. However, had the libatomic check been done, it would have failed, because libatomic.so in the repository-provided 4.8.2 has INPUT ( <name of some non-existent file> ), so trying to link with libatomic errors out.
I'm sure there are various ways of dealing with this issue, but what solved the problem for me was setting the following environment variables, please adjust to your specific setup:
export CPLUS_INCLUDE_PATH=/opt/gcc-4.8.2/include/c++/4.8.2:/opt/gcc-4.8.2/include/c++/4.8.2/x86_64-unknown-linux-gnu
export LIBRARY_PATH=/opt/gcc-4.8.2/lib64:/opt/gcc-4.8.2/lib/gcc/x86_64-unknown-linux-gnu/4.8.2
Also make sure that your 4.8.2 version of libstdc++.so is available to the dynamic linker at runtime. Since you don't have root, do
export LD_LIBRARY_PATH=/opt/gcc-4.8.2/lib64
If you had root, you could use ldconfig.
Before you start building Swift, you may want to try building, using Clang, a simple C program linking it with libatomic (the code doesn't actually have to use any symbols from the lib) and a simple C++ program that includes the <atomic> header. When compiling the C++ program, use the -std=c++11 compiler flag. If the C++ program compiles successfully, then it is not necessary for the libatomic linking test to be successful.
Interestingly, the CMakeOutput.log file still did not report finding GCC 4.8.2 as a candidate GCC installation, but the configuration/build worked well past the error.
Hopefully this helps. Please let us know if you run into something else.

CheckAtomic.cmake seems to be part of LLVM. I found a file at Github and it tries to find '__atomic_fetch_add_4' from libatomic
check_library_exists(atomic __atomic_fetch_add_4 "" HAVE_LIBATOMIC)
This fails for you. Check CMakeFiles/CMakeError.log to get more details why this test failed. Or try this line in a new project.

Related

Error "Did you compile with -rdynamic?" seen only when application installed using RPM

I have a Vala application that loads modules just gmodule-2.0, when installed through usual make install means everything works correctly. When I build an RPM file and install (on Fedora 27) using dnf install my-app I get a whole bunch of errors like
(my-app:15094): Gtk-WARNING **: Could not find signal handler 'btn_thing_changed_cb'. Did you compile with -rdynamic?
(my-app:15094): Gtk-WARNING **: Could not find signal handler 'adj_thing_value_changed_cb'. Did you compile with -rdynamic?
Even after I add -rdynamic to the build and reinstall I continue to see these errors. Somewhere I read that I need to use gmodule-export-2.0, but the diff on it's pkgconfig and the one for gmodule-2.0 shows that they're exactly the same. Soooo...
The application is written in Vala and built using valac. Also, the UI classes that I have are Gtk template classes which may be an issue, but the fact that it works when I install from source makes me think that it isn't.
This is because the default RPM build will strip the symbols out of executables. You can disable stripping by changing your spec file to include:
%global __os_install_post %{nil}
or:
%global __strip /bin/true

Linking problems with nix package manager and termux

I tried to install the nix package manager on an Android device with termux.
When I try to execute the nix applicatives (for instance nix-store or nix-env) I get the following error
/nix/store/y9mfv3sx75mbfibf1zna1kq9v98fk2nb-nix-1.11.16/bin/nix-env:
error while loading shared libraries:
/nix/store/kfk65xrfzndyyz6if5fxk4wrwz76h2lh-glibc-2.25-49/lib/libc.so:
invalid ELF header
The file seems to be a script for the GNU linker, so I'm wondering what is the problem, could it be that termux's version of ld is unable to correctly interpret GNU Linker's scripts?
Thanks in advance for any help.
Edit: It seems that if unset the LD_PRELOADED and the LD_LIBRARY_PATH variables the nix-applications work fine. Problem is that in doing so termux cannot lunch any other non nix application, such as bash for instance.

MATLAB can't see my C compiler to mex svmlib

I have 64-bit Mac, OS X 10.8.5, and I have xcode installed. I can also verify gcc works from the command line. When I type mex -setup I get
The options files available for mex are:
1: /Applications/MATLAB_R2013a.app/bin/mexopts.sh :
Template Options file for building MEX-files
0: Exit with no changes
This is unhelpful. And when I type make, with all of the relevant libsvm files in my folder of choice, I get
make
xcodebuild: error: SDK "macosx10.7" cannot be located.
xcrun: error: unable to find utility "clang", not a developer tool or in PATH
mex: compile of ' "libsvmread.c"' failed.
If make.m fails, please check README about detailed instructions.
Is anyone able to help me with this?
The quickest thing is to edit the mexopts.sh file directly, using your favorite text editor (you may need to do this with "Administrator Privileges"). The file:
/Applications/MATLAB_R2013a.app/bin/mexopts.sh
defines a bunch of paths and flags for invoking the C/C++ compiler on your system. It tends not to keep up with revisions to the MacOS.
On my system, I had to make the following changes:
lines 258-260
CC='gcc'
SDKROOT='/Developer/SDKs/MacOSX10.6.sdk'
MACOSX_DEPLOYMENT_TARGET='10.6'
line 273
CXX=g++
There will be many references to "CC=" in the file; you're looking for the ones that follow the line
maci64)
But the correct values for your system depend on which gcc/g++ you have and where they are installed. As you can see, I have the MacOS 10.6 Developer tools installed under /Develop. You will need an install of the Developer tools (XCode) - see
How to use/install gcc on Mac OS X 10.8 / Xcode 4.4
In more recent versions of the XCode tools, the path might look more like:
/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX10.9.sdk
But compiling MEX code with more recent versions of XCode might cause other problems - I had issues with char16_t, see:
MEX compile error: unknown type name 'char16_t'

Using Scons to build mongo-nonx86 on an arm based Synology NAS

I have a Synology DS212j NAS (cpu Feroceon 88FR131 rev 1 (v5l)) with the optware ipkg installed. I am trying to build mongo-nonx86 on it.
"scons all" gives me the following messages:
scons: Reading SConscript files ...
scons version: 2.0.1
python version: 2 5 6 'final' 0
Checking whether the C++ compiler worksyes
Checking for C library stdc++... no
can't find stdc++ library which is needed
I have the stdc++ library installed, I also have ssl installed. My underlying question is how can I get scons to tell me more about what is really missing, where it is looking, how it is looking etc. I have so far found no options which generate any more useful diagnostic output?
Obviously a ready-made solution for getting mongodb working on this great little box would be even more welcome :-)
Well even if you do have it installed, it doesn't seem to think so, here is what I would try to do, install libssl-dev, then try to install the dev package for libstdc++, which is: libstdc++-dev.
Then see if you can compile it.

GCC 4.7 on OS X Lion: cannot compute suffix of object files

I know this issue already discussed (include there), and no one time. But, unfortunately, I cannot solve this problem.
So, I have OS X Lion, i686-apple-darwin11-llvm-gcc-4.2 (GCC) 4.2.1, and I try to build gcc-4.7.0.
First of all, I've already built this compiler on Debian GNU/Linux, so I was sure any problems will not be...
So, I read this GCC manual and I did all exactly as described:
cd gcc-4.7.0
./contrib/download_prerequisites
cd ..
mkdir gcc_build
cd gcc_build
/Users/dshevchenko/Downloads/gcc-4.7.0/configure --prefix=/Users/dshevchenko/Tools/GCC
make
So, MPC, MPFR and GMP was successfully downloaded, and ./configure was OK. But after few minutes after make I get this error:
checking for suffix of object files... configure: error:
in `/Users/dshevchenko/Downloads/gcc_build/x86_64-apple-darwin11.4.0/libgcc':
configure: error: cannot compute suffix of object files: cannot compile
See `config.log' for more details.
As I understand this can't be due error of dynamic linking with MPFR, MPC or GMP, because these libs was built inside of GCC source code tree.
In my ~/.bash_profile:
export DYLD_LIBRARY_PATH=/Users/dshevchenko/Tools/GCC/lib
Help me please, I'll be grateful for any advice.
Be sure you have the latest Xcode (4.4 at the time of this writing). There is a bug in the llvm compiler in some versions of Xcode (including 4.1, which I had). For Xcode 4.4, the command line tools must be downloaded from the Xcode preferences.
the follow solution helped me out:
$ export CC="gcc -D_FORTIFY_SOURCE=0”
$ $srcdir/configure ...
$ make
source: http://gcc.gnu.org/bugzilla/show_bug.cgi?id=50342