I am a biology graduate student trying to export these files so that they can be used with a matlab based automated behavior classification software JAABA. It looks like there is no direct way to save .trc files as .mat (http://www.mediacy.com/imageproplus/specifications). At the very least I would like to figure out a way to read the format of the .trc files so that I could write a script to get them to make sense for JAABA. If anyone is familiar with either of these programs or both, or could simply point to a good way to write an importer (definitely outside of my skill set) I would be very grateful.
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I want to open my 3D point cloud in MATLAB. But they are in .las files. How can I display them in MATLAB???
I heard about .ply file can open 3D point data on MATLAB. So I want to know how to convert las files to ply files.
There is a .las file reader for matlab here:
https://es.mathworks.com/matlabcentral/fileexchange/48073-lasdata
Once you have the data in matlab you can use these point cloud tools, which are part of the computer vision toolbox:
https://es.mathworks.com/help/vision/3-d-point-cloud-processing.html
If you want to embrace the open source force, I'm writing a Python (easy transition from matlab) library for point cloud processing:
https://github.com/daavoo/pyntcloud
You can use the free and open-source CloudCompare software.
On the command line:
CloudCompare -O file_to_convert.las -C_EXPORT_FMT PLY -SAVE_CLOUDS
Take care to the order of the options: it seems that -SAVE_CLOUDS must be at the end.
That will result in a binary-format PLY file in the same directory as the file to convert, named using the original filename and the date of export, like: file_to_convert_2019-07-18_13h32_06_751.ply
I found no way to specify the output file name (should you find one please comment below).
Should you want a more predictable name, add option -NO_TIMESTAMP before the option -SAVE_CLOUDS (but then you risk overwriting files so be careful).
More help (such as how to export in ASCII-format) in the documentation.
I timed this on powerful PC, it took 170s to convert a 2.7GB LAS file with 102M points (XYZ,intensity,time).
if you have LAStools installed, you can use las2txt to convert your *.las/*.laz files into *.xyz format which MeshLab can import natively as a point cloud, which may then be converted into a Mesh.
There are a multitude of caveats to that depending on the source of your data-set.
in a textbook, examples on the book companion website are given in Maple, using a .mws file format.
I do not have Maple but I am interested in studying the code of the examples.
I wonder if there is a conversion tool for Linux that allows me to export to text or at least to view the content of the script.
I am aware there exist a free Maple player but from the product description it is not clear if it allows to see the script content or just "play" with the inputs it defines.
I did also try this Maple-to-Python converter, but it's very alpha and it just doesn't work.
The Maple Player should definitely be able to open any .mws file. You won't be able to run commands, but you can at least read the code contained in the file.
Maple itself can export .mws files to text, but other than that, I haven't heard of any other converters for extracting the code from these files.
Alright, here's what I'm dealing with (you can skip to TLDR if all you need to see is what I want to run):
I'm having an issue with file formatting for a nasty conglomeration of several ancient programs I've strung together. I have some data in .CSV format, and I need to put it into .SPC format. I've tried a set of proprietary MATLAB programs called 'GS tools' for fast and easy conversion, but fast and easy doesn't look like its gonna happen here since there are discrepancies in how .spc files are organized now and how they were organized back when my ancient programs were written.
If I could find the source code for the old programs I could probably alter the GS tools code to write my .spc files appropriately, but all I can find are broken links circa 2002 and earlier. Seeing as I don't know what my programs are looking for, I have no choice but to try resaving my data with other programs until one of them produces something workable.
I found my Cinderella program: if I open the data I have in a program called Spekwin and save the file with a .spc extension... viola! Everything else runs on those files. The problem is that I have hundreds of these files and I'd like to automate the conversion process.
I either need to extract the writing rubric Spekwin uses for .spc files (I believe that info is stored in a dll file within the program, but I'm not sure if that actually makes sense) and use it as a rule to write a file from my input data, or I need a piece of code that will open a file with Spekwin, tell Spekwin to save that file under the .spc extension, and terminate Spekwin.
TLDR: Need a command that tells the computer to open a file with a certain program, save that file under a different extension through that program (essentially open*.csv>save as>*.spc), then terminate the program.
OR--I need a way to tell MATLAB to write a file according to rules specified by a .dll, but I'm not sure I fully understand what that entails.
Of course I'm open to suggestions on other ways to handle this.
I am currently working on a simple tower defense game for iOS (using objective-c), which contains several maps/levels. However, as it is now, each map consists of an image file and a .plist file with information. My question is: is there any way I could create a custom file type (for example, *.map) that contains both the image and the information from the plist?
If this is possible, how do I implement this?
Thanks in advance!
You have several good choices for that:
The simplest solution would be grouping the related files in subfolders: rather than having xyz.map file, you could have an xyz sub-folder, and reference the files out of it. You would not need to use any additional libraries for this, and you would be able to use the same name for all your image files and all your level files, because they would be in separate folders.
You can make a zip archive with the files that you would like to combine, and unzip it before use. Here is a link to an answer referencing a library to do it.
You can use a tar format - here is a list to an answer referencing a library that supports it. You would be able to use tar utility on OS-X to group images with plists on your workstation.
Finally, you can define a format of your own: store the length of the first file in the first four bytes, then store the content of the first file, and then the second. You would need to write a utility for combining the two files into one. This sounds like the hardest choice to implement.
I am using a MATLAB script to tune the control system on a machine. When the tuning is complete, I would like a report containing text (especially serial number, date/time and the values determined during tuning) and plots, especially transfer functions.
What do to you recommend?
Whatever solution I use should be compatible with the MATLAB compiler so I can distribute my solution to a team of field engineers.
Ideally the report will be a PDF document.
The MATLAB report generator does not seem to be the right product as it appears that I have to break up my script into little pieces and embed them in the report template. My script contains opportunities for the user to intervene and change values or reject the tune if plots don't look right and my hunch is that this will be difficult if the code runs from the report generator. Also, I fear code structure and maintainability will be lost if the code structure is determined by the requirements of the report template.
Please comment if my assumptions are wrong.
UPDATE
I have now switched to use the MATLAB Report Generator with release r2016b and it is working very well for my compiled code users. Unfortunately it means that colleagues who have a MATLAB licence need to buy the Report Generator too, to use my tools scripted.
As the MATLAB Report Generator's development manager, I am concerned that this question may leave the wrong impression about the Report Generator's capabilities.
For one thing, the Report Generator does not require you to break a script up into little pieces and run them inside a template. You can do this if you choose and in some circumstances, it makes sense, but it is not a requirement. In fact, many Report Generator applications use a MATLAB script or program to interact with a user, generate data in the MATLAB workspace, and as a final step, generate a report from the workspace data.
Moreover, as of the R2014b version, the MATLAB Report Generator comes with a document generation API, called the DOM API, that allows you to embed document generation statements in a MATLAB program. For example, you can programmatically create a document object, add and format text, paragraphs, tables, images, lists, and subdocuments, and output Microsoft Word, HTML, or PDF output, depending on the output type you select. You can even programmatically fill in the blanks in forms that you create, using Word or an HTML editor.
The API runs on Windows, Linux, and Mac platforms and generates Word and HTML output on all three, without the use of Word. On Windows, it uses Word under the hood to produce PDF output from the Word documents that it generates.
The latest release of the MATLAB Report Generator introduces a PowerPoint API with capabilities similar to the DOM API. If you need to include report generation in your MATLAB application, please don't rule out the MATLAB Report Generator based on past impressions. You may be surprised at just how powerful it has become.
I've done this quite a bit. You're right that MATLAB Report Generator is typically not a great solution. #Max suggests the right approach (automating Word through its COM interface), but I'd add a few extra comments and tips, based on my experiences.
Remember that if you're going with this solution, you are depending that your end-users will be running Windows, and have a copy of Office on their machine. If you want to ultimately produce a PDF report, that will need to be Office 2010 or above.
I would bet that you'll find it easier to automate the report generation in Excel rather than Word. Given that you're producing a report from MATLAB, you'll likely be wanting quite a lot of things in tables of numbers, which are easier to lay out in Excel.
If you are going to do it in Word, the easiest way is to first (without MATLAB) create a template .doc/.docx file, which contains any generic text that will be the same for all reports and blank tables for any information. Turn on track changes, and insert empty comments at each point that you will be filling in information. Then within your report creation routine in MATLAB, connect to Word and iterate through each comment, replacing it with whatever data you wish.
If you are learning to automate Excel from MATLAB, this page from the Excel Interop documentation is really helpful. There's an equivalent one for Word.
Unlike #Max, I've never had good results by saving figures to an .emf file and then inserting them. In theory that does preserve editability, but I've never found that valuable. Instead, get the figure looking right (and the right size) in MATLAB, then copy it to the clipboard with print(figHandle, 'dbitmap') and paste to Excel with Worksheet.Range('A1').PasteSpecial.
To save as a PDF, use Workbook.ExportAsFixedFormat('xlTypePDF', pathToOutputFile).
Hope that helps!
I think you are right about the report generator.
In my opinion the fastest/easiest approach would be to generate the report in a html document. For that you just need the figures and write a text file, conversion should be trivial.
Quite similar approach would be to create a Latex file. And then create a pdf from it - though for this you'd need to install latex on your deployed machines.
Lastly you could use the good integration of Java in Matlab. There are several libraries you could use - like this. But I wonder if all the complication will be worth it.
Have you considered driving Microsoft Word through its ActiveX interface? I've done this in compiled Matlab programs and it works well. Look at the Matlab help for actxserver(): The object you want to create is of type Word.Application.
Edit to add: To get figures into the document, save them as .emf files using the -dmeta argument to print(), then add them to the document like this:
WordServer.Selection.InlineShapes.AddPicture(fileName);