I need to use I/O package in octave. Although I have installed the package, when running the program there is an error saying the package is not installed.
By the way I can see the package name in installed package list,too.
I installed package for several times, both by downloading it and by command window.
For a ML project on credit-card (ML with python coursera) I needed to import snapml. But unfortunately in pip install module its not unstalling.
Its showing -" error could not find a version that satisfies the requirement snapml"
and "error no matching distribuition found for snapml"
I also tried .whl file which also isnt working.
What should I do fix the issues?
Tried to install and didnt work
my setup.py is like below:
from setuptools import find_packages, setup
tests_require = ['pytest-env', 'pytest-mock', 'pytest-cov', 'pytest-xdist', 'pytest', 'mock', 'moto<=1.3.10']
setup(
name='repo_name',
version='0.1.0',
description='repo_name',
keywords=['?'],
packages=find_packages('src', exclude=['tests', 'venv']),
package_dir={'': 'src'},
package_data={'': ['schema/*.yaml']},
install_requires=[
'boto3<=1.10.19',
'requests<=2.22.0',
'jsonschema<=3.0.1',
'objectpath<=0.6.1',
'pyyaml<=5.1.1',
'sqlalchemy<=1.3.5',
'psycopg2-binary<=2.8.3',
'auth-client<=1.0.23', # internal package
'policy_client<=1.0.9', # internal package
'audit-client<=1.1.20', # internal package
'flask<=1.1.1',
'click<=7.0',
'Werkzeug<=0.15.5',
'itsdangerous<=1.1.0',
'Jinja2<=2.10.1',
'MarkupSafe<=1.1.1',
'structlog<=19.2.0',
'python-rapidjson<=0.9.1'
],
setup_requires=['pytest-runner'],
tests_require=tests_require,
extras_require={'test': tests_require},
include_package_data=True,
zip_safe=False
)
When I run python setup.py test, it will always reinstall the most of the packages that I already installed into .eggs folder, which I understand. While it's installing the package with different versions that I provided in the install_requires section, which results in below error:
pkg_resources.ContextualVersionConflict: (urllib3 1.25.10 (/Users/***/Desktop/repo/.eggs/urllib3-1.25.10-py3.7.egg), Requirement.parse('urllib3<1.25,>=1.21.1'), {'requests'})
I have to pin the requests version to 2.22.0 which requires urllib3 version no larger than 1.25, which caused my issue. So, is there anyway I can pin the urllib3 version in somewhere so when it runs, it will only install the provided version? I have tried to add the urllib3 version in install_requires, tests_require and in requirements.txt, but no luck so far.
Probably not what you want to hear but... setup_requires and tests_require are deprecated. Although they (probably) still work (mostly) fine, you might want to look for alternative solutions. As far as I know the most common alternative solutions are to use Tox instead of tests_require and PEP 517 to replace setup_requires.
In your case, it seems that your usage of setup_requires is only a consequence of your usage of tests_require. So by switching to something like Tox you get rid of both tests_require and setup_requires.
I got it resolve to simply replace python setup.py test to be pip instll -e . [test], and then pytest directly.
It will still install all the tests_require packages and then run pytest directly. Instead of going through all the list packages and find the best match versions for all packages.
UPDATES:
The real problem is I did not remove the old .eggs/ and venv/ folder when I made the packages version change. So the solution is updating the requests version to be 2.21.0 in the setup.py file, then remove the .eggs/ and venv/ folder and rerun everything.
I am running a toolkit named RNA Framework that requires ViennaRNA to be installed.
I have installed the ViennaRNA 2.4.14 to run a function named rf-fold, However, I constantly receive this error:
[!] Error: ViennaRNA package's Perl module RNA.pm is required.
Please ensure that `ViennaRNA package v2.2.0` (or greater) is installed and try again
When I check the missing RNA.pm module, I can see it is in this path:
/home/user/ViennaRNA/lib/site_perl/5.28.0/
when I check which Perl I am using (type: which Perl) it gives me:
/home/user/perl5/perlbrew/perls/perl-5.28.0/bin/perl
I tried different ways to install the ViennaRNA, including conda install -c bioconda viennarna, compile and make install from ViennaRNA-2.4.14.tar.gz file from the official website. But I cannot get over this error.
I saw a similar issue here and there is a solution (https://www.perlmonks.org/?node_id=1052814), but I don't fully understand the content. Thanks in advance for any help and sorry if it is a basic question!
I think the RNA.pm come with the package, when you download ViennaRNA-2.4.14.tar.gz and install following this link.
So I found my RNA.pm is in the directory:
/share/apps/ViennaRNA-2.1.7/compile-install/lib/site_perl/5.14.2/x86_64-linux-thread-multi/RNA.pm
And I modified the PERL5LIB environment variable by :
export PERL5LIB=/share/apps/ViennaRNA-2.1.7/compile-install/lib/
Problem solved!
I have a new macbook air running yosemite and I have installed Anaconda.
I want to practise on making GUIs with either wxpython.
When I run " conda list" wxpython is there, but when I import it I get "No module named wxpython" .
Any ideas how to fix this? Anaconda is added to my path in the bash_profile.
Regards
According to this it looks like the correct way to import this package is import wx. Try that.
It's possible you might run into a cairo error like this:
ImportError: /usr/lib64/libpangocairo-1.0.so.0: undefined symbol: cairo_ft_font_options_substitute. I was able to get around this by installing the cairo package via conda install -c https://conda.anaconda.org/pmuller cairo.