How to track a new born turtle in netlogo - netlogo

In the model that i have developed, turtles are born if a certain condition is met. When a new turtle is born, I want to track it i.e. if there are already 3 turtles alive and a 4th is born, i want to know which turtle was the newly-born.
Initially the system starts out with 2 turtles. So if a new turtle is born i first want to know that and then i want to track that turtle in terms of either WHO number or if there is a better way to do it.
To find if a new turtle is born, i initially thought of keeping count of the turtles in the previous tick and the current tick but since turtles can also die in my model the birth of a new party wont register if turtle birth and death happens simultaneously.

See if this responds to your need:
to illustrate
ca
crt 2
print [who] of turtles
print-youngest
ask turtles [hatch 1]
print-youngest
ask turtle who-of-youngest [die]
print-youngest
end
to-report who-of-youngest
report last sort [who] of turtles
end
to print-youngest
print (word "turtle " who-of-youngest " is youngest.")
end

Related

Making links based on turtles-own variable

In this example I am trying to make two directed-link-breed links based on turtles-own Value. The condition is as follows ask turtles to link to other turtles who have a smaller Value than me.
directed-link-breed [active-links active-link]
turtles-own [ Value ]
to setup
crt 100 [setxy random-xcor random-ycor set value random 500]
ask turtles [ create-active-links-to min-n-of 2 other turtles [Value < myself] ][set links to have xxxxx ]
end
when I do the following:
ask turtles [ create-active-links-to min-n-of 2 other turtles with [value < [ value ] of myself ] [set links to have xxxxx ]
I am getting the following error:
Requested 3 random agents from a set of only 2 agents.
error while turtles 8 running N-OF
called by procedure GO
called by Button 'go'
That message is telling you that (for the particular lettuce), there were only two that satisfied the criteria, but you wanted to link with 3 of them. Looking at your question, you want turtles to send links to turtles with lower values of a specific variable. What do you want the turtle with the lowest value of that variable to do? Clearly it can't link to lower valued turtles because there aren't any.
I'm also not clear why you are using min-n-of. Do you want to link to the lowest valued turtles (in which case every turtle will send links to the same few turtles) or do you want to link to randomly selected turtles with lower values (in which case turtles with higher values will have more choices)?
There are a couple of ways you can handle this once you have the logic sorted out. If you definitely want the lowest value, then use min-n-of first to find the candidates, then link to any with a lower value than the asking turtle. If you want to randomly select from a potentially larger group, use up-to-n-of instead of n-of. Or you could count the number found before trying to link to make sure there's enough.

netlogo tie-mode "fixed" fails to maintain link-length in graphs with medium-level degree

I am trying to create a network that moves through the environment as a "static" unit, i.e. nothing in the simulation changes except the position and orientation of the whole, the position and orientation of the individual turtles relative to one another are fixed by their links. Turtles are connected via undirected links, which are tied and set to tie-mode "fixed".
The problem is that in certain situations the links fail to remain fixed and link-lengths begin to change. Initially I noticed that, where the average network degree is relatively low or the network is a complete graph, the tie primitive works. However, when links were created to produce a graph that is moderately connected the link-lengths between the turtles begins to change. Upon further experimentation I can create a network with the same number of links and turtles but with different configurations i.e. the network structure is different, that sometimes maintain the positions and link-lengths but in other situations fail to do so.
How do I get the network to move as a unit no matter how connected the network is or what the configuration of the network is? See example code below, I have added code at the end where you can run multiple configurations of a network with 6 turtles and 6 links to see the issue for yourself, try running at least a half dozen iterations. Thanks!
this produces a network that moves as a unit
to setup
create-turtles 10
ask turtles [fd 2]
ask turtles [create-links-with other turtles [tie] ]
ask links [set tie-mode "fixed"]
reset-ticks
create-turtles 10
ask turtles [fd 2]
ask turtles [create-links-with other turtles [tie] ]
ask links [set tie-mode "fixed"]
reset-ticks
end
to go
ask turtles [lt 1 fd 1]
end
This produces a network whose links are still tied and set to tie-mode "fixed", but change their link-lengths. The more links that are asked to die, the more the link-lengths change.
to setup
clear-all
create-turtles 10
ask turtles [fd 2]
ask turtles [create-links-with other turtles [tie] ]
ask links [set tie-mode "fixed"]
ask one-of links [die]
reset-ticks
end
to go
ask turtles [lt 1 fd 1]
end
Here is additional code showing a specific instance of link-length change. Please input the seed 659269695 when prompted by the button "use-seed-from-user". Apologies if the code is clunky, first time using random-seed. "Print-lengths" button is to confirm that lengths change.
;USE seed: 659269695
to use-new-seed
let my-seed new-seed ;; generate a new seed
output-print word "Generated seed: " my-seed ;; print it out
random-seed my-seed ;; use the new seed
reset-ticks
end
;; Use a seed entered by the user
to use-seed-from-user
loop [
let my-seed user-input "Enter a random seed (an integer):"
carefully [ set my-seed read-from-string my-seed ] [ ]
ifelse is-number? my-seed and round my-seed = my-seed [
random-seed my-seed ;; use the new seed
output-print word "User-entered seed: " my-seed ;; print it out
reset-ticks
stop
] [
user-message "Please enter an integer."
]
]
end
to setup
clear-all
create-turtles 6
ask turtles [
fd 5
set shape "circle"
set size 1
set color yellow
if count links < 7 [ask one-of turtles [create-link-with one-of other turtles
[tie]]]]
reset-ticks
end
to go
ask turtles [lt 1 fd 1]
end
to print-lengths
print sort-by < [precision link-length 2] of links
end
I slightly revised your code so that the go procedure includes breaking a link. I also got rid of the explicit setting of tie-mode since that is done by setting the link to tie and added a tick so I could plot. So the code looks like this:
to setup
clear-all
create-turtles 10 [fd 2]
ask turtles [create-links-with other turtles [tie] ]
reset-ticks
end
to go
ask one-of links [die]
ask turtles [lt 1 fd 1]
tick
end
As far as I can see, the turtles move as a unit until it fragments with the loss of links.
I added a monitor for mean [link-length] of links, which is what I think you are asking about and also a plot of the same calculation. Yes, it is true that the average link length changes, but remember that the links are not all the same length. If a longer one dies, then the average length will reduce, and if a shorter one dies then the average will increase. The plot wanders a little, but it is basically flat until fragmentation.

you cant use tick in a turtle context because tick is observer only!! NETLOGO

If i add if to my go command i get the error message
you cant use tick in a turtle context because tick is observer only
here is my go commands. search eat go-home and den are all defined in my commands.
energy is also defined as a global variable that turtles own
to go
if ticks = day-length [set day day + 1 create-next-day]
ask adults [search eat]
if energy < 20000 [ask adults [go-home den]]
tick
end
if i take out the line
if energy < 20000 [ask adults [go-home den]]
it runs perfectly, but i need that line or an equivalent. please help
Commands
;;-------------------------------------------------------------;;
;;------------------- ADULTS COMMANDS--------------------------;;
;;-------------------------------------------------------------;;
;; Need to add a private variable (wolves own) for wolves [state] and then need to code 4 states 1. Den 2. Search 3. Eat 4. Return
;; need to code all 4 states
;; Need to correctly allocate energy and the state of decline
To den ;when wolf is full
set energy energy - .04
end
to search ;when wolf is hungry
set energy energy - .07
fd v-wolf
if random 600 = 1 ;; frequency of turn
[ ifelse random 2 = 0 ;; 50:50 chance of left or right
[ rt 15 ] ;; could add some variation to this with random-normal 45 5
[ lt 15 ]] ;; so that it samples from a dist with mean 45 SD 5
;; check if it can see a prey/food item
;; here i think we probably pick one of several possible prey
;; that are detectable randomly using the one-of command.
;; We should probably select the nearest one instead ** The turtles are getting
;; caught between two prey species and dying because they cant choose which one **
if any? prey in-radius smell [set heading towards one-of prey in-radius smell]
if energy < 0 [die]
end
To eat ;to kill prey and eat it
let kill one-of prey-here in-radius smell
;need to code in a variable for success too
if kill != nobody
[ask kill [ die ]
set energy energy + 10000]
end
to go-home ;to head home after they've eaten and den until they need to feed again
if energy > 30000 [set target-patch min-one-of (patches with [pcolor = white]) [distance myself]]
face target-patch
fd v-wolf
set energy energy - 1
end
if energy < 20000 [ask adults [go-home den]] will be a problem in go if energy is (as it appears) a turtle variable. This will make the context of the procedure a turtle context, not an observer context.
Edit:
For example, if energy is a turtle variable, perhaps you meant
ask adults [if (energy < 20000) [go-home den]]
First, you need to build your code much more gradually. You have multiple parts of your code that don't work and that you don't understand. Try adding the smallest amount you can and make sure that works before adding anything else. You have three different questions at the moment, with errors in different parts of your code.
On the context issue in Alan's answer, think about it this way: the variable 'energy' belongs to turtles. This means that if you have 10 turtles, you have 10 variables named 'energy', one for each turtle. Which one are you checking whether it is <20000?
What you probably want is to check it for EACH turtle individually and get the turtle to do the required action if it passes the test. So it must be inside ask turtles [], and that changes from the observer to the turtle context (what model entity is doing the thing).
to go
if ticks = day-length
[ set day day + 1
create-next-day
]
ask adults
[ search
eat
if energy < 20000
[ go-home
den
]
]
tick
end
I have also cleaned up your formatting. This is not a requirement, NetLogo is happy to deal with spaces wherever you put them. However, as your code gets longer and more complicated, it will be much easier for you to debug if you follow some basic practices (1) each call to a procedure, each command etc on a separate line (2) bracket [] and indent so that you can see the code block that the brackets enclose.

Netlogo: obstacle avoidance--tell turtles to take shortest path around

Model Details I'm attempting to code territory selection in NetLogo. Turtle 0 selects a territory center, and builds a territory. It select patches based on value of food, discounted by the distance away (food / # patches away from center of the territory), selecting patches in order of discounted value. It stops when it meets total food requirements. Patches selected don't have to be connected to the territory, but should become connected as the turtle walks to the selected patch. These patches crossed are added as travel corridors so that the territory remains contiguous. After Turtle 0 has finished building its territory, Turtle 1 sprouts and repeats the process to select its own territory, then Turtle 2, and so on. Patches belonging to a turtle's territory are unavailable to other turtles.
The Problem Existing territories should be seen as obstacles. Turtles need to identify and go around these obstacles to reach their destination patch using the shortest path possible.
In my current code, turtles will select patches on the other side of an existing territory because they just travel across it. They won't have added a travel corridor to get there, however, because the patches on the way there were already owned.
What are some ways I might tell turtles that if they encounter owned patches (existing territories), they must go around using the shortest distance possible so they can build a travel corridor to the selected patch? I realize this is a complex question, made even more so if actual distances are calculated in (connected question: NetLogo: measure real travel distances around obstacles before choosing destination). I've been racking my brain on this one, so any ideas are helpful. Thanks in advance!
patches-own [
benefit ;; ranges 0.1-1 and represents food available in the patch
owner ] ;; patches are owned once selected for a territory
turtles-own
[ sum-value ] ;; sum of values of patches in my territory
globals [threshold = 25]
to setup
ask patches [ set owner nobody ]
end
to go
ask turtles [build-territory]
tick
end
to build-territory
if sum-value > threshold [stop] ;; keeps picking patches for territory until I've met my threshold
pick-patch
reproduce ;; sprouts a new hatchling when done building territory
end
to pick-patch
let _destination highest-value ;; this is calculated in reporters, below
ifelse _destination != nobody [
face _destination forward 1
if patch-here = _destination ;; add the patch once reached
[ claim-patch _destination ]
if patch-here != _destination
[ if owner = nobody [claim-travel-patch ]] ;; add a travel patch while walking to selected patch
[ if owner != nobody [avoid-obstacle]] ;; or avoid the obstacle of existing territories
]
[stop] ;; if there is no _destination
end
to claim-patch [_patch]
ask _patch [set owner myself]
set sum-value sum-value + (benefit / (distance start-patch))
set pcolor [color] of self
;; etc....
end
to claim-travel-patch [_patch]
ask _patch [set owner myself]
set pcolor [yellow]
;; etc....
end
to avoid-obstacle
;; need to identify some means of going around owned patches
;; ideally this will use the shortest route possible....
;; but even if not shortest route, any ideas for identifying a new path
;; to avoid the obstacle and reach the destination patch?
end
to reproduce
if sum-value > threshold [ ask patch 75 75 [sprout 1 ] ]
end
;;;; --reporters for calculations:--
to-report highest-value ;; calculates value, benefit / cost.
let available-destinations patches with [owner = nobody]
report max-one-of available-destinations [benefit-to-me / cost-to-me]
end
to-report benefit-to-me
report mean [benefit] of patches in-radius 1 ;; this is basically a moving windows analysis to find a cluster of high-benefit patches.
end
to-report cost-to-me
report distance myself ;; later, this will hopefully account for actual travel costs (non-euclidean distance), including around other territories. I think this is complicated, so ignoring for now in this question.
end

Maintaining two states of turtles netlogo

I am doing a small university project. In which i have to maintain 2 states of turtles.
1. Disperse
2. Explore
Disperse :
In dispersion, when at the start all the turtles (20 turtles) are at 0,0 they should disperse from each other. Every turtle has a radius of 2 patches around it, no other turtle should be in that radius. All turtles should go far until they all attain this radius. then other behavior will be called i.e. Explore.
Explore:
In explore , they have to explore the world and avoid different types of obstacles. When ever two turtles come close to each other above mentioned radius then state should be changed to disperse.
I have procedures for obstacle avoidance, and move-speed, and all other individual behaviors under Disperse and Explore. But i don't know how to join all this in one simulation.
It is unclear that you really need to maintain turtle state, since you will have to repeatedly check for other turtles in any case. But since you said you wanted that, you can use turtles-own. For example:
turtles-own [state]
to setup
ca
crt 20
end
to go
ask turtles [set-state]
ask turtles [move]
end
to set-state ;;turtle proc
ifelse (any? other turtles in-radius 2) [
set state "disperse"
] [
set state "explore"
]
end
to move ;;turtle proc
if (not member? state ["disperse" "explore"]) [
error "unknown state"
]
if (state = "disperse") [
disperse
]
if (state = "explore") [
explore
]
end
to disperse ;;turtle proc
move-to one-of patch-set [neighbors] of neighbors
end
to explore
move-to one-of neighbors
end
You might want to take a look at Moore machine and Automata, NetLogo works great with those.
A Moore machine can be seen as a set of 5 elements that interact with each other, in this particular example the start state(S0) would be Dispersing. In NetLogo you can use the word run that receives a string. You'd had to make a procedure that returns a string (say "explore") by checking the actual state of a turtle.
I made something like that a few months ago. We were trying to make a hunter-prey model for polar bears and seals (or wolves and sheeps) based on Moore Machines.
You can use the example of #Alan of course, I just skimmed through and I believe it was fine.
Here is my example based on Moore Machine. It's in spanish but the idea is the same.