I am running a perl script on a web server. I am getting the error in the httpd error log file:
/usr/bin/perl: symbol lookup error:
/usr/local/lib64/perl5/auto/Bio/Ext/Align/Align.so:
undefined symbol:
bp_sw_read_Blast_file_CompMat, referer: http://XX/model_select.pl
[Line breaks added for readability]
I checked some of the forums and did this:
cpanp -i /usr/local/lib64/perl5/auto/Bio/Ext/Align/Align.so
ERROR '/usr/local/lib64/perl5/auto/Bio/Ext/Align/Align.so' does not contain an author part
ERROR Cannot find '/usr/local/lib64/perl5/auto/Bio/Ext/Align/Align.so' in the module tree
No such module: /usr/local/lib64/perl5/auto/Bio/Ext/Align/Align.so
No modules found to operate on!
Nothing done
I checked, Align.so exists in the path shown in the error message
Can someone please help me solve the problem. Thanks much ! :-)
Related
I am trying to build an MQTT system on a raspberry pi. I was studying about MQTT and read about it a lot. I found a set of MQTT blocks in the Simulink Raspberry Pi Hardware Support Package that I assumed I could directly use. I configured an MQTT server and got all the right credentials and everything but I am now stuck on one part that has left me stumped.
I keep getting this error saying that "fatal error: MQTTAsync.h: No such file or directory". I have looked a lot trying to find anything that might help me but I couldn't. I don't know where to get the necessary files that I need or if there is any solution to sort this. I'm sharing the entire snippet of the error if that is of any help. Thanks in advance.
I apologize I'm not able to get to the whole error into a code block
Error executing command "touch -c /home/pi/MATLAB_ws/R2022a/C/Users/User/Documents/MATLAB/Project_RPi_ert_rtw/*.*;make -f Project_RPi.mk all MATLAB_WORKSPACE="/home/pi/MATLAB_ws/R2022a" -C /home/pi/MATLAB_ws/R2022a/C/Users/User/Documents/MATLAB/Project_RPi_ert_rtw LC_ALL=C". Details:
STDERR: In file included from /home/pi/MATLAB_ws/R2022a/C/ProgramData/MATLAB/SupportPackages/R2022a/toolbox/realtime/targets/linux/src/MW_MQTT.c:5:
/home/pi/MATLAB_ws/R2022a/C/ProgramData/MATLAB/SupportPackages/R2022a/toolbox/realtime/targets/linux/include/MW_MQTT.h:49:10: fatal error: MQTTAsync.h: No such file or directory
#include <MQTTAsync.h>
^~~~~~~~~~~~~
compilation terminated.
make: *** [Project_RPi.mk:411: MW_MQTT.c.o] Error 1
STDOUT: make: Entering directory '/home/pi/MATLAB_ws/R2022a/C/Users/User/Documents/MATLAB/Project_RPi_ert_rtw'
gcc -c -MMD -MP -MF"MW_MQTT.c.dep" -MT"MW_MQTT.c.o" -O2 -D__MW_TARGET_USE_HARDWARE_RESOURCES_H__ -DMW_CAN_BITRATE=500000 -DMW_CAN_ALLOWALLMSGS=1 -DMW_NUM_MQTT_SUBSCRIBE=1 -DCLASSIC_INTERFACE=0 -DALLOCATIONFCN=0 -DTERMFCN=1 -DONESTEPFCN=1 -DMAT_FILE=0 -DMULTI_INSTANCE_CODE=0 -DINTEGER_CODE=0 -DMT=0 -DTID01EQ=0 -D__linux__ -DARM_PROJECT -D_USE_TARGET_UDP_ -D_RUNONTARGETHARDWARE_BUILD_ -DSTACK_SIZE=64 -DRT -DMODEL=Project_RPi -DNUMST=1 -DNCSTATES=0 -DHAVESTDIO -DMODEL_HAS_DYNAMICALLY_LOADED_SFCNS=0 -I/home/pi/MATLAB_ws/R2022a/C/Users/User/Documents/MATLAB -I/home/pi/MATLAB_ws/R2022a/C/ProgramData/MATLAB/SupportPackages/R2022a/toolbox/realtime/targets/linux/include -I/home/pi/MATLAB_ws/R2022a/C/ProgramData/MATLAB/SupportPackages/R2022a/toolbox/target/shared/svd/include -I/home/pi/MATLAB_ws/R2022a/C/ProgramData/MATLAB/SupportPackages/R2022a/toolbox/realtime/targets/raspi/include -I/home/pi/MATLAB_ws/R2022a/C/Users/User/Documents/MATLAB/Project_RPi_ert_rtw -I/home/pi/MATLAB_ws/R2022a/C/Program_Files/MATLAB/R2022a/extern/include -I/home/pi/MATLAB_ws/R2022a/C/Program_Files/MATLAB/R2022a/simulink/include -I/home/pi/MATLAB_ws/R2022a/C/Program_Files/MATLAB/R2022a/rtw/c/src -I/home/pi/MATLAB_ws/R2022a/C/Program_Files/MATLAB/R2022a/rtw/c/src/ext_mode/common -I/home/pi/MATLAB_ws/R2022a/C/Program_Files/MATLAB/R2022a/rtw/c/ert -I/home/pi/MATLAB_ws/R2022a/C/Program_Files/MATLAB/R2022a/toolbox/coder/rtiostream/src/utils -I/home/pi/MATLAB_ws/R2022a/C/Program_Files/MATLAB/R2022a/toolbox/target/codertarget/rtos/inc -o "MW_MQTT.c.o" "/home/pi/MATLAB_ws/R2022a/C/ProgramData/MATLAB/SupportPackages/R2022a/toolbox/realtime/targets/linux/src/MW_MQTT.c"
make: Leaving directory '/home/pi/MATLAB_ws/R2022a/C/Users/User/Documents/MATLAB/Project_RPi_ert_rtw'
I was trying to get my hands dirty with SLAM and I started with ORB-SLAM2 library.
I have downloaded a TUM sequence and wanted to use ROS for it. So I am following the steps according this page.
In Step 7, part 2, when i run ./build_ros.sh, I get the following error:
In file included from /home/sarvagya/Desktop/Swaayatt/ORB_SLAM2/Examples/ROS/ORB_SLAM2/../../../Thirdparty/g2o/g2o/types/../core/optimizable_graph.h:41:0,
from /home/sarvagya/Desktop/Swaayatt/ORB_SLAM2/Examples/ROS/ORB_SLAM2/../../../Thirdparty/g2o/g2o/types/../core/base_vertex.h:30,
from /home/sarvagya/Desktop/Swaayatt/ORB_SLAM2/Examples/ROS/ORB_SLAM2/../../../Thirdparty/g2o/g2o/types/types_seven_dof_expmap.h:34,
from /home/sarvagya/Desktop/Swaayatt/ORB_SLAM2/Examples/ROS/ORB_SLAM2/../../../include/LoopClosing.h:34,
from /home/sarvagya/Desktop/Swaayatt/ORB_SLAM2/Examples/ROS/ORB_SLAM2/../../../include/LocalMapping.h:26,
from /home/sarvagya/Desktop/Swaayatt/ORB_SLAM2/Examples/ROS/ORB_SLAM2/../../../include/Tracking.h:31,
from /home/sarvagya/Desktop/Swaayatt/ORB_SLAM2/Examples/ROS/ORB_SLAM2/../../../include/System.h:29,
from /home/sarvagya/Desktop/Swaayatt/ORB_SLAM2/Examples/ROS/ORB_SLAM2/src/AR/ViewerAR.h:29,
from /home/sarvagya/Desktop/Swaayatt/ORB_SLAM2/Examples/ROS/ORB_SLAM2/src/AR/ViewerAR.cc:21:
/home/sarvagya/Desktop/Swaayatt/ORB_SLAM2/Examples/ROS/ORB_SLAM2/../../../Thirdparty/g2o/g2o/types/../core/jacobian_workspace.h:36:24: fatal error: g2o/config.h: No such file or directory
compilation terminated.
CMakeFiles/MonoAR.dir/build.make:198: recipe for target 'CMakeFiles/MonoAR.dir/src/AR/ViewerAR.cc.o' failed
make[2]: *** [CMakeFiles/MonoAR.dir/src/AR/ViewerAR.cc.o] Error 1
make[2]: *** Waiting for unfinished jobs....
I went and checked the g2o folder and there is a file by name config.h.
So why am I still getting the error?
In the CMakeLists.txt in /home/sarvagya/Desktop/Swaayatt/ORB_SLAM2/Examples/ROS/ORB_SLAM2/
Try adding
${PROJECT_SOURCE_DIR}/../../../Thirdparty
to the list of include_directories() at line 44 (it should be at that line if you did not change the file)
Adding this line tells the cmake where to find the g2o/config.h.
From the information, that missing g2o/config.h in jacobian_workspace.h, but when I look into the file, and do not find the include in line 36. Do I miss something, or you change something?
I am getting the error below during make test on Solaris even though the make command executed successfully.
Can't load '/e/scripts/Proc-ProcessTable-0.53/blib/arch/auto/Proc/ProcessTable/ProcessTable.so' for module Proc::ProcessTable: ld.so.1: perl: fatal: /e/scripts/Proc-ProcessTable-0.53/blib/arch/auto/Proc/ProcessTable/ProcessTable.so: wrong ELF class: ELFCLASS32 at /usr/perl5/5.10/lib/5.10.0/sun4-solaris-thread-multi-64/DynaLoader.pm line 203.
Can someone help and suggest what is wrong here?
I want to install cpan module called Coro for Perl, after typing
cpan Coro
I get error something like Could not make: Unknown error
Here is full log from console: http://pastebin.com/NpXbG2eN
I do not know what is wrong with this.
I found some errors during install:
error: lvalue required as left operand of assignment fatal error:
db.h: No such file or directory
This is relevant:
*** It seems you are running perl version 5.022001, likely the "official" or
*** "standard" version. While there is nothing wrong with doing that,
*** standard perl versions 5.022 and up are not supported by Coro.
The error you are getting:
State.xs: In function ‘coro_derive_padlist’:
State.xs:581:29: error: lvalue required as left operand of assignment
PadlistNAMES (newpadlist) = padnames;
Coro relies on Perl internals that changed.
Ambiguous call resolved as CORE::read(), qualify as such or use & at (eval 23) line 4.
Subroutine Audio::Wav::Read::read redefined at /usr/local/share/perl/5.14.2/Audio/Wav/Read.pm line 316.
[FATAL] (/usr/local/share/perl/5.14.2/SailTools/SailHtkWrapper.pm line 414) HVite failed: ERROR [+6510] LOpen: Unable to open label file support/test/local/asr/timit_5.0-11000.rec
The installation procedure for SailAlign is listed on its github page. Follow that in detail.
If you continue to have problems, edit this question to list
Which steps worked?
Where did the error occur?
What are the specs of your environment.