mongodb aggregate skip limit count for pagination - mongodb

I want to apply the pagination on this aggregated data (all the documents which matched and project with both collection 2 and 3). I have tried multiple
queries, i am passing limit 25 but it will get only 20 document, which changes require in this query for pagination
var pipeline = [{
$match: query
}, {
$limit: limit
}, {
$skip: skip
}, {
$lookup: {
from: "collection2",
localField: "collection1Field",
foreignField: "collection2Field",
as: "combined1"
}
}, {
"$unwind": "$combined1"
}, {
$lookup: {
from: "collection3",
localField: "collection1Field",
foreignField: "collection3Field",
as: "combined2"
}
}, {
"$unwind": "$combined2"
}, {
$project: {
"collection1Field1": 1,
"collection1Field2": 1,
"collection1Field3": 1,
"collection2Field.field1": 1,
"collection2Field.field2": 1,
"collection3Field.field1": 1,
"collection3Field.field2": 1,
}
}
];

I just had a similar issue. I was getting no results back on "page 2" due to the fact that I ran limit, then skip.
The docs for $skip:
Skips over the specified number of documents that pass into the stage
and passes the remaining documents to the next stage in the pipeline.
The docs for $limit:
Limits the number of documents passed to the next stage in the
pipeline.
This means that if you run limit before skip then the results returned by the limit are then potentially truncated by the skip.
For example if limit is 50 and skip is 50 (for say page 2) then the match will find items, limit the results to 50, and then subsequently skip 50, thus feeding 0 results into any stages afterwards.
I WOULD NOT RECOMMEND running $skip and $limit at the end of the query as the DB will have done pipeline operations on a substantial amount of data that will be skipped/limited out at the end. Additionally there is a limit to the amount of memory aggregations can use which will end queries in a error if the limit is exceeded (100MB - see bottom). There is an option to turn on disk use if you exceed this limit, but a good way to optimize your code without relying on disk is to skip + limit your results before entering any $lookup or $unwind steps.
The one exception to the rule is $sort which is intelligent enough to use $limit if $limit immediately follows $sort (docs):
When a $sort immediately precedes a $limit in the pipeline, the $sort
operation only maintains the top n results as it progresses, where n
is the specified limit, and MongoDB only needs to store n items in
memory. This optimization still applies when allowDiskUse is true and
the n items exceed the aggregation memory limit.
From your code I would recommend the following (skip then limit):
var pipeline = [{
$match: query
}, {
$skip: skip
}, {
$limit: limit
}, {
$lookup: {
from: "collection2",
localField: "collection1Field",
foreignField: "collection2Field",
as: "combined1"
}
}, {
"$unwind": "$combined1"
}, {
$lookup: {
from: "collection3",
localField: "collection1Field",
foreignField: "collection3Field",
as: "combined2"
}
}, {
"$unwind": "$combined2"
}, {
$project: {
"collection1Field1": 1,
"collection1Field2": 1,
"collection1Field3": 1,
"collection2Field.field1": 1,
"collection2Field.field2": 1,
"collection3Field.field1": 1,
"collection3Field.field2": 1,
}
}];
Docs regarding aggregatation pipeline limits:
Memory Restrictions Changed in version 2.6.
Pipeline stages have a limit of 100 megabytes of RAM. If a stage
exceeds this limit, MongoDB will produce an error. To allow for the
handling of large datasets, use the allowDiskUse option to enable
aggregation pipeline stages to write data to temporary files.
Changed in version 3.4.
The $graphLookup stage must stay within the 100 megabyte memory limit.
If allowDiskUse: true is specified for the aggregate() operation, the
$graphLookup stage ignores the option. If there are other stages in
the aggregate() operation, allowDiskUse: true option is in effect for
these other stages.

You want to paginate after you get the results.
var pipeline = [{
$match: query
}, {
$lookup: {
from: "collection2",
localField: "collection1Field",
foreignField: "collection2Field",
as: "combined1"
}
}, {
"$unwind": "$combined1"
}, {
$lookup: {
from: "collection3",
localField: "collection1Field",
foreignField: "collection3Field",
as: "combined2"
}
}, {
"$unwind": "$combined2"
}, {
$project: {
"collection1Field1": 1,
"collection1Field2": 1,
"collection1Field3": 1,
"collection2Field.field1": 1,
"collection2Field.field2": 1,
"collection3Field.field1": 1,
"collection3Field.field2": 1,
}
}, {
$limit: limit
}, {
$skip: skip
}
];

If you use some npm modules for pagination you can Implementing pagination very easily. for exapmle if you use mongoose-aggregate-paginate then you just add it into the schema like...
const mongoose = require('mongoose');
const mongooseAggregatePaginate = require('mongoose-aggregate-
paginate');
mongoose.Promise = global.Promise;
const chatSchema = new mongoose.Schema({
text: {
type: String,
},
},
{
collection: 'chat',
timestamps: true
});
chatSchema.plugin(mongooseAggregatePaginate);
const chat = mongoose.model('chat', chatSchema);
module.exports = chat;
After this whenever you need pagination, Your query should be
UserCtr.get = (req, res) => {
const { limit } = 10;
const { page } = req.query.page;
const aggregateRules = [{
$match: {
_id: req.user.id
},
{
//Perform your query
}
];
Chat.aggregatePaginate(aggregateRules, {
page,
limit
}, (err, docs,
pages, total) => {
if (!err) {
const results = {
docs,
total,
limit,
page,
pages,
};
res.status(200).json(results);
} else {
res.status(500).json(err);
}
});
};
It gives response like
{
"docs": [
{
"_id": "5a7676c938c185142f99c4c3",
},
{
"_id": "5a7676c938c185142f99c4c4",
},
{
"_id": "5a7676cf38c185142f99c4c5",
}
],
"total": 3,
"limit": 50,
"page": "1",
"pages": 1
}

Related

MongoDB index use on mongoose aggregate() call

I have the following aggregate() call in Mongoose 6.9.0:
const latestTradeForPair = await Trade.aggregate([
{
$lookup: {
from: 'tradablepairs',
localField: 'tradablePair',
foreignField: '_id',
as: 'tradablePairDetails',
},
},
{
$match: {
'tradablePairDetails.pair_name': pairName,
},
},
{
$sort: {
time: -1,
},
},
{
$limit: 1,
},
]);
I have been trying, unsuccessfully, to create an index to speed up this query, since I have millions of the Trade documents. I have this:
tradeSchema.index({ tradablePair: 1, time: -1 });
However, the query does not appear to be hitting this index (according to Compass). I have been quizzing ChatGPT about this, but he/she is not very helpful and every suggestion gives rise to errors about writeConcerns and other such things.
How do I create an index that will be targeted by this query?

How to count number of root documents in intermediate aggregate stage in mongo?

I want to implement pagination on a website and I'd like my mongodb query to return first perform the lookup between 2 collections, sort the documents, calculate the total number of documents and then return the relevant documents after $skip and $limit stages in the aggregation. This is my query:
const res = await Product.aggregate([
{
$lookup: {
from: 'Brand',
localField: 'a',
foreignField: 'b',
as: 'brand'
}
},
{
$sort: {
c: 1,
'brand.d': -1
}
},
{
$skip: offset
},
{
$limit: productsPerPage
}
])
I don't want to make 2 queries which are essentially the same only for the first one to return the count of documents and for the other to return the documents themselves.
So the result would be something like this:
{
documents: [...],
totalMatchedDocumentsCount: x
}
such that there will be for example 10 documents but totalMatchedDocumentsCount may be 500.
I can't figure out how to do this, I don't see that aggregate method returns cursor. Is it possible to achieve what I want in one query?
You need $facet and you can run your pipeline with $limit and $skip as one subpipeline while $count can be used simultaneously:
const res = await Product.aggregate([
// $match here if needed
{
$facet: {
documents: [
{
$lookup: {
from: 'Brand',
localField: 'a',
foreignField: 'b',
as: 'brand'
}
},
{
$sort: {
c: 1,
'brand.d': -1
}
},
{
$skip: offset
},
{
$limit: productsPerPage
}
],
total: [
{ $count: "count" }
]
}
},
{
$unwind: "$total"
}
])

Mongo aggregate query throws error: exceeds maximum document size [duplicate]

I have a pretty simple $lookup aggregation query like the following:
{'$lookup':
{'from': 'edge',
'localField': 'gid',
'foreignField': 'to',
'as': 'from'}}
When I run this on a match with enough documents I get the following error:
Command failed with error 4568: 'Total size of documents in edge
matching { $match: { $and: [ { from: { $eq: "geneDatabase:hugo" }
}, {} ] } } exceeds maximum document size' on server
All attempts to limit the number of documents fail. allowDiskUse: true does nothing. Sending a cursor in does nothing. Adding in a $limit into the aggregation also fails.
How could this be?
Then I see the error again. Where did that $match and $and and $eq come from? Is the aggregation pipeline behind the scenes farming out the $lookup call to another aggregation, one it runs on its own that I have no ability to provide limits for or use cursors with??
What is going on here?
As stated earlier in comment, the error occurs because when performing the $lookup which by default produces a target "array" within the parent document from the results of the foreign collection, the total size of documents selected for that array causes the parent to exceed the 16MB BSON Limit.
The counter for this is to process with an $unwind which immediately follows the $lookup pipeline stage. This actually alters the behavior of $lookup in such that instead of producing an array in the parent, the results are instead a "copy" of each parent for every document matched.
Pretty much just like regular usage of $unwind, with the exception that instead of processing as a "separate" pipeline stage, the unwinding action is actually added to the $lookup pipeline operation itself. Ideally you also follow the $unwind with a $match condition, which also creates a matching argument to also be added to the $lookup. You can actually see this in the explain output for the pipeline.
The topic is actually covered (briefly) in a section of Aggregation Pipeline Optimization in the core documentation:
$lookup + $unwind Coalescence
New in version 3.2.
When a $unwind immediately follows another $lookup, and the $unwind operates on the as field of the $lookup, the optimizer can coalesce the $unwind into the $lookup stage. This avoids creating large intermediate documents.
Best demonstrated with a listing that puts the server under stress by creating "related" documents that would exceed the 16MB BSON limit. Done as briefly as possible to both break and work around the BSON Limit:
const MongoClient = require('mongodb').MongoClient;
const uri = 'mongodb://localhost/test';
function data(data) {
console.log(JSON.stringify(data, undefined, 2))
}
(async function() {
let db;
try {
db = await MongoClient.connect(uri);
console.log('Cleaning....');
// Clean data
await Promise.all(
["source","edge"].map(c => db.collection(c).remove() )
);
console.log('Inserting...')
await db.collection('edge').insertMany(
Array(1000).fill(1).map((e,i) => ({ _id: i+1, gid: 1 }))
);
await db.collection('source').insert({ _id: 1 })
console.log('Fattening up....');
await db.collection('edge').updateMany(
{},
{ $set: { data: "x".repeat(100000) } }
);
// The full pipeline. Failing test uses only the $lookup stage
let pipeline = [
{ $lookup: {
from: 'edge',
localField: '_id',
foreignField: 'gid',
as: 'results'
}},
{ $unwind: '$results' },
{ $match: { 'results._id': { $gte: 1, $lte: 5 } } },
{ $project: { 'results.data': 0 } },
{ $group: { _id: '$_id', results: { $push: '$results' } } }
];
// List and iterate each test case
let tests = [
'Failing.. Size exceeded...',
'Working.. Applied $unwind...',
'Explain output...'
];
for (let [idx, test] of Object.entries(tests)) {
console.log(test);
try {
let currpipe = (( +idx === 0 ) ? pipeline.slice(0,1) : pipeline),
options = (( +idx === tests.length-1 ) ? { explain: true } : {});
await new Promise((end,error) => {
let cursor = db.collection('source').aggregate(currpipe,options);
for ( let [key, value] of Object.entries({ error, end, data }) )
cursor.on(key,value);
});
} catch(e) {
console.error(e);
}
}
} catch(e) {
console.error(e);
} finally {
db.close();
}
})();
After inserting some initial data, the listing will attempt to run an aggregate merely consisting of $lookup which will fail with the following error:
{ MongoError: Total size of documents in edge matching pipeline { $match: { $and : [ { gid: { $eq: 1 } }, {} ] } } exceeds maximum document size
Which is basically telling you the BSON limit was exceeded on retrieval.
By contrast the next attempt adds the $unwind and $match pipeline stages
The Explain output:
{
"$lookup": {
"from": "edge",
"as": "results",
"localField": "_id",
"foreignField": "gid",
"unwinding": { // $unwind now is unwinding
"preserveNullAndEmptyArrays": false
},
"matching": { // $match now is matching
"$and": [ // and actually executed against
{ // the foreign collection
"_id": {
"$gte": 1
}
},
{
"_id": {
"$lte": 5
}
}
]
}
}
},
// $unwind and $match stages removed
{
"$project": {
"results": {
"data": false
}
}
},
{
"$group": {
"_id": "$_id",
"results": {
"$push": "$results"
}
}
}
And that result of course succeeds, because as the results are no longer being placed into the parent document then the BSON limit cannot be exceeded.
This really just happens as a result of adding $unwind only, but the $match is added for example to show that this is also added into the $lookup stage and that the overall effect is to "limit" the results returned in an effective way, since it's all done in that $lookup operation and no other results other than those matching are actually returned.
By constructing in this way you can query for "referenced data" that would exceed the BSON limit and then if you want $group the results back into an array format, once they have been effectively filtered by the "hidden query" that is actually being performed by $lookup.
MongoDB 3.6 and Above - Additional for "LEFT JOIN"
As all the content above notes, the BSON Limit is a "hard" limit that you cannot breach and this is generally why the $unwind is necessary as an interim step. There is however the limitation that the "LEFT JOIN" becomes an "INNER JOIN" by virtue of the $unwind where it cannot preserve the content. Also even preserveNulAndEmptyArrays would negate the "coalescence" and still leave the intact array, causing the same BSON Limit problem.
MongoDB 3.6 adds new syntax to $lookup that allows a "sub-pipeline" expression to be used in place of the "local" and "foreign" keys. So instead of using the "coalescence" option as demonstrated, as long as the produced array does not also breach the limit it is possible to put conditions in that pipeline which returns the array "intact", and possibly with no matches as would be indicative of a "LEFT JOIN".
The new expression would then be:
{ "$lookup": {
"from": "edge",
"let": { "gid": "$gid" },
"pipeline": [
{ "$match": {
"_id": { "$gte": 1, "$lte": 5 },
"$expr": { "$eq": [ "$$gid", "$to" ] }
}}
],
"as": "from"
}}
In fact this would be basically what MongoDB is doing "under the covers" with the previous syntax since 3.6 uses $expr "internally" in order to construct the statement. The difference of course is there is no "unwinding" option present in how the $lookup actually gets executed.
If no documents are actually produced as a result of the "pipeline" expression, then the target array within the master document will in fact be empty, just as a "LEFT JOIN" actually does and would be the normal behavior of $lookup without any other options.
However the output array to MUST NOT cause the document where it is being created to exceed the BSON Limit. So it really is up to you to ensure that any "matching" content by the conditions stays under this limit or the same error will persist, unless of course you actually use $unwind to effect the "INNER JOIN".
I had same issue with fllowing Node.js query becuase 'redemptions' collection has more then 400,000 of data. I am using Mongo DB server 4.2 and Node JS driver 3.5.3.
db.collection('businesses').aggregate(
{
$lookup: { from: 'redemptions', localField: "_id", foreignField: "business._id", as: "redemptions" }
},
{
$project: {
_id: 1,
name: 1,
email: 1,
"totalredemptions" : {$size:"$redemptions"}
}
}
I have modified query as below to make it work super fast.
db.collection('businesses').aggregate(query,
{
$lookup:
{
from: 'redemptions',
let: { "businessId": "$_id" },
pipeline: [
{ $match: { $expr: { $eq: ["$business._id", "$$businessId"] } } },
{ $group: { _id: "$_id", totalCount: { $sum: 1 } } },
{ $project: { "_id": 0, "totalCount": 1 } }
],
as: "redemptions"
},
{
$project: {
_id: 1,
name: 1,
email: 1,
"totalredemptions" : {$size:"$redemptions"}
}
}
}

MongoDB aggregation error when counting lookup results [duplicate]

I have a pretty simple $lookup aggregation query like the following:
{'$lookup':
{'from': 'edge',
'localField': 'gid',
'foreignField': 'to',
'as': 'from'}}
When I run this on a match with enough documents I get the following error:
Command failed with error 4568: 'Total size of documents in edge
matching { $match: { $and: [ { from: { $eq: "geneDatabase:hugo" }
}, {} ] } } exceeds maximum document size' on server
All attempts to limit the number of documents fail. allowDiskUse: true does nothing. Sending a cursor in does nothing. Adding in a $limit into the aggregation also fails.
How could this be?
Then I see the error again. Where did that $match and $and and $eq come from? Is the aggregation pipeline behind the scenes farming out the $lookup call to another aggregation, one it runs on its own that I have no ability to provide limits for or use cursors with??
What is going on here?
As stated earlier in comment, the error occurs because when performing the $lookup which by default produces a target "array" within the parent document from the results of the foreign collection, the total size of documents selected for that array causes the parent to exceed the 16MB BSON Limit.
The counter for this is to process with an $unwind which immediately follows the $lookup pipeline stage. This actually alters the behavior of $lookup in such that instead of producing an array in the parent, the results are instead a "copy" of each parent for every document matched.
Pretty much just like regular usage of $unwind, with the exception that instead of processing as a "separate" pipeline stage, the unwinding action is actually added to the $lookup pipeline operation itself. Ideally you also follow the $unwind with a $match condition, which also creates a matching argument to also be added to the $lookup. You can actually see this in the explain output for the pipeline.
The topic is actually covered (briefly) in a section of Aggregation Pipeline Optimization in the core documentation:
$lookup + $unwind Coalescence
New in version 3.2.
When a $unwind immediately follows another $lookup, and the $unwind operates on the as field of the $lookup, the optimizer can coalesce the $unwind into the $lookup stage. This avoids creating large intermediate documents.
Best demonstrated with a listing that puts the server under stress by creating "related" documents that would exceed the 16MB BSON limit. Done as briefly as possible to both break and work around the BSON Limit:
const MongoClient = require('mongodb').MongoClient;
const uri = 'mongodb://localhost/test';
function data(data) {
console.log(JSON.stringify(data, undefined, 2))
}
(async function() {
let db;
try {
db = await MongoClient.connect(uri);
console.log('Cleaning....');
// Clean data
await Promise.all(
["source","edge"].map(c => db.collection(c).remove() )
);
console.log('Inserting...')
await db.collection('edge').insertMany(
Array(1000).fill(1).map((e,i) => ({ _id: i+1, gid: 1 }))
);
await db.collection('source').insert({ _id: 1 })
console.log('Fattening up....');
await db.collection('edge').updateMany(
{},
{ $set: { data: "x".repeat(100000) } }
);
// The full pipeline. Failing test uses only the $lookup stage
let pipeline = [
{ $lookup: {
from: 'edge',
localField: '_id',
foreignField: 'gid',
as: 'results'
}},
{ $unwind: '$results' },
{ $match: { 'results._id': { $gte: 1, $lte: 5 } } },
{ $project: { 'results.data': 0 } },
{ $group: { _id: '$_id', results: { $push: '$results' } } }
];
// List and iterate each test case
let tests = [
'Failing.. Size exceeded...',
'Working.. Applied $unwind...',
'Explain output...'
];
for (let [idx, test] of Object.entries(tests)) {
console.log(test);
try {
let currpipe = (( +idx === 0 ) ? pipeline.slice(0,1) : pipeline),
options = (( +idx === tests.length-1 ) ? { explain: true } : {});
await new Promise((end,error) => {
let cursor = db.collection('source').aggregate(currpipe,options);
for ( let [key, value] of Object.entries({ error, end, data }) )
cursor.on(key,value);
});
} catch(e) {
console.error(e);
}
}
} catch(e) {
console.error(e);
} finally {
db.close();
}
})();
After inserting some initial data, the listing will attempt to run an aggregate merely consisting of $lookup which will fail with the following error:
{ MongoError: Total size of documents in edge matching pipeline { $match: { $and : [ { gid: { $eq: 1 } }, {} ] } } exceeds maximum document size
Which is basically telling you the BSON limit was exceeded on retrieval.
By contrast the next attempt adds the $unwind and $match pipeline stages
The Explain output:
{
"$lookup": {
"from": "edge",
"as": "results",
"localField": "_id",
"foreignField": "gid",
"unwinding": { // $unwind now is unwinding
"preserveNullAndEmptyArrays": false
},
"matching": { // $match now is matching
"$and": [ // and actually executed against
{ // the foreign collection
"_id": {
"$gte": 1
}
},
{
"_id": {
"$lte": 5
}
}
]
}
}
},
// $unwind and $match stages removed
{
"$project": {
"results": {
"data": false
}
}
},
{
"$group": {
"_id": "$_id",
"results": {
"$push": "$results"
}
}
}
And that result of course succeeds, because as the results are no longer being placed into the parent document then the BSON limit cannot be exceeded.
This really just happens as a result of adding $unwind only, but the $match is added for example to show that this is also added into the $lookup stage and that the overall effect is to "limit" the results returned in an effective way, since it's all done in that $lookup operation and no other results other than those matching are actually returned.
By constructing in this way you can query for "referenced data" that would exceed the BSON limit and then if you want $group the results back into an array format, once they have been effectively filtered by the "hidden query" that is actually being performed by $lookup.
MongoDB 3.6 and Above - Additional for "LEFT JOIN"
As all the content above notes, the BSON Limit is a "hard" limit that you cannot breach and this is generally why the $unwind is necessary as an interim step. There is however the limitation that the "LEFT JOIN" becomes an "INNER JOIN" by virtue of the $unwind where it cannot preserve the content. Also even preserveNulAndEmptyArrays would negate the "coalescence" and still leave the intact array, causing the same BSON Limit problem.
MongoDB 3.6 adds new syntax to $lookup that allows a "sub-pipeline" expression to be used in place of the "local" and "foreign" keys. So instead of using the "coalescence" option as demonstrated, as long as the produced array does not also breach the limit it is possible to put conditions in that pipeline which returns the array "intact", and possibly with no matches as would be indicative of a "LEFT JOIN".
The new expression would then be:
{ "$lookup": {
"from": "edge",
"let": { "gid": "$gid" },
"pipeline": [
{ "$match": {
"_id": { "$gte": 1, "$lte": 5 },
"$expr": { "$eq": [ "$$gid", "$to" ] }
}}
],
"as": "from"
}}
In fact this would be basically what MongoDB is doing "under the covers" with the previous syntax since 3.6 uses $expr "internally" in order to construct the statement. The difference of course is there is no "unwinding" option present in how the $lookup actually gets executed.
If no documents are actually produced as a result of the "pipeline" expression, then the target array within the master document will in fact be empty, just as a "LEFT JOIN" actually does and would be the normal behavior of $lookup without any other options.
However the output array to MUST NOT cause the document where it is being created to exceed the BSON Limit. So it really is up to you to ensure that any "matching" content by the conditions stays under this limit or the same error will persist, unless of course you actually use $unwind to effect the "INNER JOIN".
I had same issue with fllowing Node.js query becuase 'redemptions' collection has more then 400,000 of data. I am using Mongo DB server 4.2 and Node JS driver 3.5.3.
db.collection('businesses').aggregate(
{
$lookup: { from: 'redemptions', localField: "_id", foreignField: "business._id", as: "redemptions" }
},
{
$project: {
_id: 1,
name: 1,
email: 1,
"totalredemptions" : {$size:"$redemptions"}
}
}
I have modified query as below to make it work super fast.
db.collection('businesses').aggregate(query,
{
$lookup:
{
from: 'redemptions',
let: { "businessId": "$_id" },
pipeline: [
{ $match: { $expr: { $eq: ["$business._id", "$$businessId"] } } },
{ $group: { _id: "$_id", totalCount: { $sum: 1 } } },
{ $project: { "_id": 0, "totalCount": 1 } }
],
as: "redemptions"
},
{
$project: {
_id: 1,
name: 1,
email: 1,
"totalredemptions" : {$size:"$redemptions"}
}
}
}

Aggregate $lookup Total size of documents in matching pipeline exceeds maximum document size

I have a pretty simple $lookup aggregation query like the following:
{'$lookup':
{'from': 'edge',
'localField': 'gid',
'foreignField': 'to',
'as': 'from'}}
When I run this on a match with enough documents I get the following error:
Command failed with error 4568: 'Total size of documents in edge
matching { $match: { $and: [ { from: { $eq: "geneDatabase:hugo" }
}, {} ] } } exceeds maximum document size' on server
All attempts to limit the number of documents fail. allowDiskUse: true does nothing. Sending a cursor in does nothing. Adding in a $limit into the aggregation also fails.
How could this be?
Then I see the error again. Where did that $match and $and and $eq come from? Is the aggregation pipeline behind the scenes farming out the $lookup call to another aggregation, one it runs on its own that I have no ability to provide limits for or use cursors with??
What is going on here?
As stated earlier in comment, the error occurs because when performing the $lookup which by default produces a target "array" within the parent document from the results of the foreign collection, the total size of documents selected for that array causes the parent to exceed the 16MB BSON Limit.
The counter for this is to process with an $unwind which immediately follows the $lookup pipeline stage. This actually alters the behavior of $lookup in such that instead of producing an array in the parent, the results are instead a "copy" of each parent for every document matched.
Pretty much just like regular usage of $unwind, with the exception that instead of processing as a "separate" pipeline stage, the unwinding action is actually added to the $lookup pipeline operation itself. Ideally you also follow the $unwind with a $match condition, which also creates a matching argument to also be added to the $lookup. You can actually see this in the explain output for the pipeline.
The topic is actually covered (briefly) in a section of Aggregation Pipeline Optimization in the core documentation:
$lookup + $unwind Coalescence
New in version 3.2.
When a $unwind immediately follows another $lookup, and the $unwind operates on the as field of the $lookup, the optimizer can coalesce the $unwind into the $lookup stage. This avoids creating large intermediate documents.
Best demonstrated with a listing that puts the server under stress by creating "related" documents that would exceed the 16MB BSON limit. Done as briefly as possible to both break and work around the BSON Limit:
const MongoClient = require('mongodb').MongoClient;
const uri = 'mongodb://localhost/test';
function data(data) {
console.log(JSON.stringify(data, undefined, 2))
}
(async function() {
let db;
try {
db = await MongoClient.connect(uri);
console.log('Cleaning....');
// Clean data
await Promise.all(
["source","edge"].map(c => db.collection(c).remove() )
);
console.log('Inserting...')
await db.collection('edge').insertMany(
Array(1000).fill(1).map((e,i) => ({ _id: i+1, gid: 1 }))
);
await db.collection('source').insert({ _id: 1 })
console.log('Fattening up....');
await db.collection('edge').updateMany(
{},
{ $set: { data: "x".repeat(100000) } }
);
// The full pipeline. Failing test uses only the $lookup stage
let pipeline = [
{ $lookup: {
from: 'edge',
localField: '_id',
foreignField: 'gid',
as: 'results'
}},
{ $unwind: '$results' },
{ $match: { 'results._id': { $gte: 1, $lte: 5 } } },
{ $project: { 'results.data': 0 } },
{ $group: { _id: '$_id', results: { $push: '$results' } } }
];
// List and iterate each test case
let tests = [
'Failing.. Size exceeded...',
'Working.. Applied $unwind...',
'Explain output...'
];
for (let [idx, test] of Object.entries(tests)) {
console.log(test);
try {
let currpipe = (( +idx === 0 ) ? pipeline.slice(0,1) : pipeline),
options = (( +idx === tests.length-1 ) ? { explain: true } : {});
await new Promise((end,error) => {
let cursor = db.collection('source').aggregate(currpipe,options);
for ( let [key, value] of Object.entries({ error, end, data }) )
cursor.on(key,value);
});
} catch(e) {
console.error(e);
}
}
} catch(e) {
console.error(e);
} finally {
db.close();
}
})();
After inserting some initial data, the listing will attempt to run an aggregate merely consisting of $lookup which will fail with the following error:
{ MongoError: Total size of documents in edge matching pipeline { $match: { $and : [ { gid: { $eq: 1 } }, {} ] } } exceeds maximum document size
Which is basically telling you the BSON limit was exceeded on retrieval.
By contrast the next attempt adds the $unwind and $match pipeline stages
The Explain output:
{
"$lookup": {
"from": "edge",
"as": "results",
"localField": "_id",
"foreignField": "gid",
"unwinding": { // $unwind now is unwinding
"preserveNullAndEmptyArrays": false
},
"matching": { // $match now is matching
"$and": [ // and actually executed against
{ // the foreign collection
"_id": {
"$gte": 1
}
},
{
"_id": {
"$lte": 5
}
}
]
}
}
},
// $unwind and $match stages removed
{
"$project": {
"results": {
"data": false
}
}
},
{
"$group": {
"_id": "$_id",
"results": {
"$push": "$results"
}
}
}
And that result of course succeeds, because as the results are no longer being placed into the parent document then the BSON limit cannot be exceeded.
This really just happens as a result of adding $unwind only, but the $match is added for example to show that this is also added into the $lookup stage and that the overall effect is to "limit" the results returned in an effective way, since it's all done in that $lookup operation and no other results other than those matching are actually returned.
By constructing in this way you can query for "referenced data" that would exceed the BSON limit and then if you want $group the results back into an array format, once they have been effectively filtered by the "hidden query" that is actually being performed by $lookup.
MongoDB 3.6 and Above - Additional for "LEFT JOIN"
As all the content above notes, the BSON Limit is a "hard" limit that you cannot breach and this is generally why the $unwind is necessary as an interim step. There is however the limitation that the "LEFT JOIN" becomes an "INNER JOIN" by virtue of the $unwind where it cannot preserve the content. Also even preserveNulAndEmptyArrays would negate the "coalescence" and still leave the intact array, causing the same BSON Limit problem.
MongoDB 3.6 adds new syntax to $lookup that allows a "sub-pipeline" expression to be used in place of the "local" and "foreign" keys. So instead of using the "coalescence" option as demonstrated, as long as the produced array does not also breach the limit it is possible to put conditions in that pipeline which returns the array "intact", and possibly with no matches as would be indicative of a "LEFT JOIN".
The new expression would then be:
{ "$lookup": {
"from": "edge",
"let": { "gid": "$gid" },
"pipeline": [
{ "$match": {
"_id": { "$gte": 1, "$lte": 5 },
"$expr": { "$eq": [ "$$gid", "$to" ] }
}}
],
"as": "from"
}}
In fact this would be basically what MongoDB is doing "under the covers" with the previous syntax since 3.6 uses $expr "internally" in order to construct the statement. The difference of course is there is no "unwinding" option present in how the $lookup actually gets executed.
If no documents are actually produced as a result of the "pipeline" expression, then the target array within the master document will in fact be empty, just as a "LEFT JOIN" actually does and would be the normal behavior of $lookup without any other options.
However the output array to MUST NOT cause the document where it is being created to exceed the BSON Limit. So it really is up to you to ensure that any "matching" content by the conditions stays under this limit or the same error will persist, unless of course you actually use $unwind to effect the "INNER JOIN".
I had same issue with fllowing Node.js query becuase 'redemptions' collection has more then 400,000 of data. I am using Mongo DB server 4.2 and Node JS driver 3.5.3.
db.collection('businesses').aggregate(
{
$lookup: { from: 'redemptions', localField: "_id", foreignField: "business._id", as: "redemptions" }
},
{
$project: {
_id: 1,
name: 1,
email: 1,
"totalredemptions" : {$size:"$redemptions"}
}
}
I have modified query as below to make it work super fast.
db.collection('businesses').aggregate(query,
{
$lookup:
{
from: 'redemptions',
let: { "businessId": "$_id" },
pipeline: [
{ $match: { $expr: { $eq: ["$business._id", "$$businessId"] } } },
{ $group: { _id: "$_id", totalCount: { $sum: 1 } } },
{ $project: { "_id": 0, "totalCount": 1 } }
],
as: "redemptions"
},
{
$project: {
_id: 1,
name: 1,
email: 1,
"totalredemptions" : {$size:"$redemptions"}
}
}
}