Scala: Converting Iterator to RDD - scala

Question

Input : MyRDD.collect()
Array[(String, List[Int])] = Array((4,List(97, 99, 101, 102, 103)), (8,List(97, 98, 99, 102, 103, 104)), (19,List(97, 98, 102)), (15,List(97, 99, 101))
Output:
Array[(String, List[Int])] = Array((4,List(97, 99, 101, 102, 103)), (8,List(97, 98, 99, 102, 103, 104)), (19,List(97, 98, 102)), (15,List(97, 99, 101))
Function Call: MyRDD.mapPartitions(myfunc).collect()
I'm trying to convert the Iterator to RDD inside myfunc() to perform few other transformations on it.
def myfunc(chunk : Iterator[(String, List[Int])] ): Iterator[Int] =
{
var k = 1
var a=chunk.toMap
val trainRdd: RDD[(String, List[Int])] = sc.parallelize(a.toSeq).map{case (k,v) => (k,v)}
//Will perform few operations on RDD in next few steps
return Iterator(k)
}
while the conversion code works fine in scala shell when executed without the function, the same line of code doesn't seem to be working inside the function. Assume the RDD has atleast 2 partitions. It throws Null pointer exception which is shown below.
ERROR Executor: Exception in task 1.0 in stage 7.0 (TID 10)
java.lang.NullPointerException
at $line46.$read$$iw$$iw$$iw$$iw$$iw$$iw$$iw$$iw.somefuncpartition(<console>:37)
at $line47.$read$$iw$$iw$$iw$$iw$$iw$$iw$$iw$$iw$$anonfun$1.apply(<console>:44)
at $line47.$read$$iw$$iw$$iw$$iw$$iw$$iw$$iw$$iw$$anonfun$1.apply(<console>:44)
at org.apache.spark.rdd.RDD$$anonfun$mapPartitions$1$$anonfun$apply$23.apply(RDD.scala:797)
at org.apache.spark.rdd.RDD$$anonfun$mapPartitions$1$$anonfun$apply$23.apply(RDD.scala:797)
at org.apache.spark.rdd.MapPartitionsRDD.compute(MapPartitionsRDD.scala:38)
at org.apache.spark.rdd.RDD.computeOrReadCheckpoint(RDD.scala:323)
at org.apache.spark.rdd.RDD.iterator(RDD.scala:287)
at org.apache.spark.scheduler.ResultTask.runTask(ResultTask.scala:87)
at org.apache.spark.scheduler.Task.run(Task.scala:108)
at org.apache.spark.executor.Executor$TaskRunner.run(Executor.scala:338)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624)
at java.lang.Thread.run(Thread.java:748)
18/03/01 00:09:44 ERROR Executor: Exception in task 0.0 in stage 7.0 (TID 9)
java.lang.NullPointerException
at $line46.$read$$iw$$iw$$iw$$iw$$iw$$iw$$iw$$iw.somefuncpartition(<console>:37)
at $line47.$read$$iw$$iw$$iw$$iw$$iw$$iw$$iw$$iw$$anonfun$1.apply(<console>:44)
at $line47.$read$$iw$$iw$$iw$$iw$$iw$$iw$$iw$$iw$$anonfun$1.apply(<console>:44)
at org.apache.spark.rdd.RDD$$anonfun$mapPartitions$1$$anonfun$apply$23.apply(RDD.scala:797)
at org.apache.spark.rdd.RDD$$anonfun$mapPartitions$1$$anonfun$apply$23.apply(RDD.scala:797)
at org.apache.spark.rdd.MapPartitionsRDD.compute(MapPartitionsRDD.scala:38)
at org.apache.spark.rdd.RDD.computeOrReadCheckpoint(RDD.scala:323)
at org.apache.spark.rdd.RDD.iterator(RDD.scala:287)
at org.apache.spark.scheduler.ResultTask.runTask(ResultTask.scala:87)
at org.apache.spark.scheduler.Task.run(Task.scala:108)
at org.apache.spark.executor.Executor$TaskRunner.run(Executor.scala:338)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624)
at java.lang.Thread.run(Thread.java:748)
18/03/01 00:09:45 WARN TaskSetManager: Lost task 1.0 in stage 7.0 (TID 10, localhost, executor driver): java.lang.NullPointerException
at $line46.$read$$iw$$iw$$iw$$iw$$iw$$iw$$iw$$iw.somefuncpartition(<console>:37)
at $line47.$read$$iw$$iw$$iw$$iw$$iw$$iw$$iw$$iw$$anonfun$1.apply(<console>:44)
at $line47.$read$$iw$$iw$$iw$$iw$$iw$$iw$$iw$$iw$$anonfun$1.apply(<console>:44)
at org.apache.spark.rdd.RDD$$anonfun$mapPartitions$1$$anonfun$apply$23.apply(RDD.scala:797)
at org.apache.spark.rdd.RDD$$anonfun$mapPartitions$1$$anonfun$apply$23.apply(RDD.scala:797)
at org.apache.spark.rdd.MapPartitionsRDD.compute(MapPartitionsRDD.scala:38)
at org.apache.spark.rdd.RDD.computeOrReadCheckpoint(RDD.scala:323)
at org.apache.spark.rdd.RDD.iterator(RDD.scala:287)
at org.apache.spark.scheduler.ResultTask.runTask(ResultTask.scala:87)
at org.apache.spark.scheduler.Task.run(Task.scala:108)
at org.apache.spark.executor.Executor$TaskRunner.run(Executor.scala:338)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624)
at java.lang.Thread.run(Thread.java:748)
18/03/01 00:09:45 ERROR TaskSetManager: Task 1 in stage 7.0 failed 1 times; aborting job
org.apache.spark.SparkException: Job aborted due to stage failure: Task 1 in stage 7.0 failed 1 times, most recent failure: Lost task 1.0 in stage 7.0 (TID 10, localhost, executor driver): java.lang.NullPointerException
at somefuncpartition(<console>:37)
at $anonfun$1.apply(<console>:44)
at $anonfun$1.apply(<console>:44)
at org.apache.spark.rdd.RDD$$anonfun$mapPartitions$1$$anonfun$apply$23.apply(RDD.scala:797)
at org.apache.spark.rdd.RDD$$anonfun$mapPartitions$1$$anonfun$apply$23.apply(RDD.scala:797)
at org.apache.spark.rdd.MapPartitionsRDD.compute(MapPartitionsRDD.scala:38)
at org.apache.spark.rdd.RDD.computeOrReadCheckpoint(RDD.scala:323)
at org.apache.spark.rdd.RDD.iterator(RDD.scala:287)
at org.apache.spark.scheduler.ResultTask.runTask(ResultTask.scala:87)
at org.apache.spark.scheduler.Task.run(Task.scala:108)
at org.apache.spark.executor.Executor$TaskRunner.run(Executor.scala:338)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624)
at java.lang.Thread.run(Thread.java:748)
Driver stacktrace:
at org.apache.spark.scheduler.DAGScheduler.org$apache$spark$scheduler$DAGSchedule r$$failJobAndIndependentStages(DAGScheduler.scala:1517)
at org.apache.spark.scheduler.DAGScheduler$$anonfun$abortStage$1.apply(DAGScheduler.scala:1505)
at org.apache.spark.scheduler.DAGScheduler$$anonfun$abortStage$1.apply(DAGScheduler.scala:1504)
at scala.collection.mutable.ResizableArray$class.foreach(ResizableArray.scala:59)
at scala.collection.mutable.ArrayBuffer.foreach(ArrayBuffer.scala:48)
at org.apache.spark.scheduler.DAGScheduler.abortStage(DAGScheduler.scala:1504)
at org.apache.spark.scheduler.DAGScheduler$$anonfun$handleTaskSetFailed$1.apply(DAGScheduler.scala:814)
at org.apache.spark.scheduler.DAGScheduler$$anonfun$handleTaskSetFailed$1.apply(DAGScheduler.scala:814)
at scala.Option.foreach(Option.scala:257)
at org.apache.spark.scheduler.DAGScheduler.handleTaskSetFailed(DAGScheduler.scala:814)
at org.apache.spark.scheduler.DAGSchedulerEventProcessLoop.doOnReceive(DAGScheduler.scala:1732)
at org.apache.spark.scheduler.DAGSchedulerEventProcessLoop.onReceive(DAGScheduler.scala:1687)
at org.apache.spark.scheduler.DAGSchedulerEventProcessLoop.onReceive(DAGScheduler.scala:1676)
at org.apache.spark.util.EventLoop$$anon$1.run(EventLoop.scala:48)
at org.apache.spark.scheduler.DAGScheduler.runJob(DAGScheduler.scala:630)
at org.apache.spark.SparkContext.runJob(SparkContext.scala:2029)
at org.apache.spark.SparkContext.runJob(SparkContext.scala:2050)
at org.apache.spark.SparkContext.runJob(SparkContext.scala:2069)
at org.apache.spark.SparkContext.runJob(SparkContext.scala:2094)
at org.apache.spark.rdd.RDD$$anonfun$collect$1.apply(RDD.scala:936)
at org.apache.spark.rdd.RDDOperationScope$.withScope(RDDOperationScope.scala:151)
at org.apache.spark.rdd.RDDOperationScope$.withScope(RDDOperationScope.scala:112)
at org.apache.spark.rdd.RDD.withScope(RDD.scala:362)
at org.apache.spark.rdd.RDD.collect(RDD.scala:935) ... 48 elided
Caused by: java.lang.NullPointerException
at somefuncpartition(<console>:37)
at $anonfun$1.apply(<console>:44)
at $anonfun$1.apply(<console>:44)
at org.apache.spark.rdd.RDD$$anonfun$mapPartitions$1$$anonfun$apply$23.apply(RDD.scala:797)
at org.apache.spark.rdd.RDD$$anonfun$mapPartitions$1$$anonfun$apply$23.apply(RDD.scala:797)
at org.apache.spark.rdd.MapPartitionsRDD.compute(MapPartitionsRDD.scala:38)
at org.apache.spark.rdd.RDD.computeOrReadCheckpoint(RDD.scala:323)
at org.apache.spark.rdd.RDD.iterator(RDD.scala:287)
at org.apache.spark.scheduler.ResultTask.runTask(ResultTask.scala:87)
at org.apache.spark.scheduler.Task.run(Task.scala:108)
at org.apache.spark.executor.Executor$TaskRunner.run(Executor.scala:338)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624)
at java.lang.Thread.run(Thread.java:748)