Maven Project in Eclipse port connection refused - eclipse

How do I configure Eclipse to fix the error below:
Caused by: java.net.ConnectException: Connection refused (Connection refused)
at java.net.PlainSocketImpl.socketConnect(Native Method) ~[na:1.8.0_111]
at java.net.AbstractPlainSocketImpl.doConnect(AbstractPlainSocketImpl.java:350) ~[na:1.8.0_111]
at java.net.AbstractPlainSocketImpl.connectToAddress(AbstractPlainSocketImpl.java:206) ~[na:1.8.0_111]
at java.net.AbstractPlainSocketImpl.connect(AbstractPlainSocketImpl.java:188) ~[na:1.8.0_111]
at java.net.SocksSocketImpl.connect(SocksSocketImpl.java:392) ~[na:1.8.0_111]
at java.net.Socket.connect(Socket.java:589) ~[na:1.8.0_111]
at com.mysql.jdbc.StandardSocketFactory.connect(StandardSocketFactory.java:211) ~[mysql-connector-java-5.1.45.jar:5.1.45]
at com.mysql.jdbc.MysqlIO.(MysqlIO.java:300) ~[mysql-connector-java-5.1.45.jar:5.1.45]
... 92 common frames omitted

Related

MongoSocketOpenException while using mongo uri with ocp mongodb route

2023-01-13 11:02:36.291 INFO 1 --- [ main]
org.mongodb.driver.cluster: Cluster created with settings {hosts=mongo.apps.lab.pacosta.com:27017], mode=SINGLE, requiredClusterType=UNKNOWN, derverSelectionTimeout='30000 ms'}
2023-01-13 11:02:36.429 INFO 1 --- [costa.com:27017] org.mongodb.driver.cluster: Exception in monitor thread
while connecting to server mongo.apps.lab.pacosta.com:27017
com.mongodb.MongoSocketOpenException: Exception opening socket
at com.mongodb.internal.connection.SocketStream.open(SocketStream.java:70) ~[mongodb-driver-core-4.1.1.jar!/:na]
at com.mongodb.internal.connection.InternalStreamConnection.open(InternalStreamConnection.java:143) ~[mongodb-driver-core-4.1.1.jar!/:na]
at com.mongodb.internal.connection.DefaultServerMonitor$ServerMonitorRunnable.lookupServerDescription(DefaultServerMonitor.java:188) ~[mongodb-driver-core-4.1.1.jar!/:na]
at com.mongodb.internal.connection.DefaultServerMonitor$ServerMonitorRunnable.run(DefaultServerMonitor.java:144) ~[mongodb-driver-core-4.1.1.jar!/:na]
at java.lang.Thread.run(Thread.java:748) [na:1.8.0_212] Caused by: java.net.ConnectException: Connection refused (Connection refused)
at java.net.PlainSocketImpl.socketConnect(Native Method) ~[na:1.8.0_212]
at java.net.AbstractPlainSocketImpl.doConnect(AbstractPlainSocketImpl.java:350) ~[na:1.8.0_212]
at java.net.AbstractPlainSocketImpl.connectToAddress(AbstractPlainSocketImpl.java:206) ~[na:1.8.0_212]
at java.net.AbstractPlainSocketImpl.connect(AbstractPlainSocketImpl.java:188) ~[na:1.8.0_212]
at java.net.SocksSocketImpl.connect(SocksSocketImpl.java:392) ~[na:1.8.0_212]
at java.net.Socket.connect(Socket.java:589) ~[na:1.8.0_212]`
Here are screenshots of OCP routes and environment variables.
We are doing the same thing in our spring boot service using OCP version 4.11 but instead of using service ip we are taking it as a domain in mongo uri which is unable to create the connection

Sending job to remote carte server ends with empty HTTP dialog

I have uploaded my repository to a remote server and when trying to run the job from my local PC on the server, I just get a dialog that says 'http'. Details show
org.pentaho.di.core.exception.KettleException:
java.net.UnknownHostException: http
http
at org.pentaho.di.job.Job.sendToSlaveServer(Job.java:1717)
at org.pentaho.di.ui.spoon.delegates.SpoonJobDelegate.executeJob(SpoonJobDelegate.java:1421)
at org.pentaho.di.ui.spoon.Spoon.executeJob(Spoon.java:8603)
at org.pentaho.di.ui.spoon.Spoon.executeFile(Spoon.java:8562)
at org.pentaho.di.ui.spoon.Spoon.runFile(Spoon.java:8527)
at org.pentaho.di.ui.spoon.job.JobGraph.runJob(JobGraph.java:3429)
at org.pentaho.di.ui.spoon.job.JobGraph$11.widgetSelected(JobGraph.java:1436)
at org.eclipse.swt.widgets.TypedListener.handleEvent(Unknown Source)
at org.eclipse.swt.widgets.EventTable.sendEvent(Unknown Source)
at org.eclipse.swt.widgets.Display.sendEvent(Unknown Source)
at org.eclipse.swt.widgets.Widget.sendEvent(Unknown Source)
at org.eclipse.swt.widgets.Display.runDeferredEvents(Unknown Source)
at org.eclipse.swt.widgets.Display.readAndDispatch(Unknown Source)
at org.pentaho.di.ui.spoon.Spoon.readAndDispatch(Spoon.java:1405)
at org.pentaho.di.ui.spoon.Spoon.waitForDispose(Spoon.java:7989)
at org.pentaho.di.ui.spoon.Spoon.start(Spoon.java:9371)
at org.pentaho.di.ui.spoon.Spoon.main(Spoon.java:711)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:498)
at org.pentaho.commons.launcher.Launcher.main(Launcher.java:92)
Caused by: java.net.UnknownHostException: http
at java.net.Inet6AddressImpl.lookupAllHostAddr(Native Method)
at java.net.InetAddress$2.lookupAllHostAddr(InetAddress.java:929)
at java.net.InetAddress.getAddressesFromNameService(InetAddress.java:1324)
at java.net.InetAddress.getAllByName0(InetAddress.java:1277)
at java.net.InetAddress.getAllByName(InetAddress.java:1193)
at java.net.InetAddress.getAllByName(InetAddress.java:1127)
at org.apache.http.impl.conn.SystemDefaultDnsResolver.resolve(SystemDefaultDnsResolver.java:45)
at org.apache.http.impl.conn.DefaultHttpClientConnectionOperator.connect(DefaultHttpClientConnectionOperator.java:112)
at org.apache.http.impl.conn.PoolingHttpClientConnectionManager.connect(PoolingHttpClientConnectionManager.java:374)
at org.apache.http.impl.execchain.MainClientExec.establishRoute(MainClientExec.java:393)
at org.apache.http.impl.execchain.MainClientExec.execute(MainClientExec.java:236)
at org.apache.http.impl.execchain.ProtocolExec.execute(ProtocolExec.java:186)
at org.apache.http.impl.execchain.RetryExec.execute(RetryExec.java:89)
at org.apache.http.impl.execchain.RedirectExec.execute(RedirectExec.java:110)
at org.apache.http.impl.client.InternalHttpClient.doExecute(InternalHttpClient.java:185)
at org.apache.http.impl.client.CloseableHttpClient.execute(CloseableHttpClient.java:83)
at org.apache.http.impl.client.CloseableHttpClient.execute(CloseableHttpClient.java:56)
at org.pentaho.di.cluster.SlaveServer.executeAuth(SlaveServer.java:707)
at org.pentaho.di.cluster.SlaveServer.sendXML(SlaveServer.java:617)
at org.pentaho.di.job.Job.sendToSlaveServer(Job.java:1694)
... 21 more
I can reach the server via the browser and Web GUI so in general its available. I am also getting the same error when trying to monitor the carte server from Spoon.

Just realized what the issue was: don't use http://mylittleserver.com as host but just mylittleserver.com - that fixes it!

Fail to start program run program_run

The source of the error:
io.cdap.cdap.internal.app.runtime.distributed.remote.RemoteExecutionTwillRunnerService#543-runtime-startup-1
The error message:
java.io.IOException: com.jcraft.jsch.JSchException:
java.net.ConnectException: Connection timed out (Connection timed out)
at
io.cdap.cdap.common.ssh.DefaultSSHSession.(DefaultSSHSession.java:82)
~[na:na] at
io.cdap.cdap.internal.app.runtime.distributed.remote.RemoteExecutionTwillPreparer.lambda$start$0(RemoteExecutionTwillPreparer.java:429)
~[na:na] at
io.cdap.cdap.internal.app.runtime.distributed.remote.RemoteExecutionTwillRunnerService$ControllerFactory.lambda$create$0(RemoteExecutionTwillRunnerService.java:519)
~[na:na] at
java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:511)
~[na:1.8.0_212] at
java.util.concurrent.FutureTask.run(FutureTask.java:266)
~[na:1.8.0_212] at
java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149)
~[na:1.8.0_212] at
java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624)
~[na:1.8.0_212] at java.lang.Thread.run(Thread.java:748)
~[na:1.8.0_212] Caused by: com.jcraft.jsch.JSchException:
java.net.ConnectException: Connection timed out (Connection timed out)
at com.jcraft.jsch.Util.createSocket(Util.java:349)
~[com.jcraft.jsch-0.1.54.jar:na] at
com.jcraft.jsch.Session.connect(Session.java:215)
~[com.jcraft.jsch-0.1.54.jar:na] at
com.jcraft.jsch.Session.connect(Session.java:183)
~[com.jcraft.jsch-0.1.54.jar:na] at
io.cdap.cdap.common.ssh.DefaultSSHSession.(DefaultSSHSession.java:79)
~[na:na] ... 7 common frames omitted Caused by:
java.net.ConnectException: Connection timed out (Connection timed out)
at java.net.PlainSocketImpl.socketConnect(Native Method)
~[na:1.8.0_212] at
java.net.AbstractPlainSocketImpl.doConnect(AbstractPlainSocketImpl.java:350)
~[na:1.8.0_212] at
java.net.AbstractPlainSocketImpl.connectToAddress(AbstractPlainSocketImpl.java:206)
~[na:1.8.0_212] at
java.net.AbstractPlainSocketImpl.connect(AbstractPlainSocketImpl.java:188)
~[na:1.8.0_212] at
java.net.SocksSocketImpl.connect(SocksSocketImpl.java:392)
~[na:1.8.0_212] at java.net.Socket.connect(Socket.java:589)
~[na:1.8.0_212] at java.net.Socket.connect(Socket.java:538)
~[na:1.8.0_212] at java.net.Socket.(Socket.java:434)
~[na:1.8.0_212] at java.net.Socket.(Socket.java:211)
~[na:1.8.0_212] at com.jcraft.jsch.Util.createSocket(Util.java:343)
~[com.jcraft.jsch-0.1.54.jar:na] ... 10 common frames omitted

This looks like a problem when CDAP tries to ssh to the remote cluster at the start of a program run. This is normally due to firewalls blocking ingress traffic to port 22 and can be fixed by creating a firewall rule that allows it.
See https://cloud.google.com/data-fusion/docs/how-to/create-instance#before_you_begin for more information about steps that should be taken to ensure the Data Fusion instance has the access it needs.

I built a springboot jar file into a mirror,but when I run it ,I can't connect mysql

The jar file can be run successfully with java, but the image is run incorrectly.
docker images
REPOSITORY TAG IMAGE ID CREATED SIZE
backend latest bad78d214712 16 minutes ago 735MB
command :docker run -p 8000:8000 backend
a springboot jar,mysql 5.7
Dockerfile and jar package in the same directory
dockfile
FROM aurorasystem/openjdk-zeromq:latest
MAINTAINER Aurora System <it#aurora-system.com>
VOLUME /tmp
COPY backend-2.0.0.jar app.jar
RUN bash -c "touch /app.jar"
EXPOSE 8888
ENTRYPOINT ["java","-jar","/app.jar"]
error
19-06-06 08:19:37.173 [main] WARN : c.z.hikari.util.DriverDataSource.<init> - Registered driver with driverClassName=com.mysql.jdbc.Driver was not found, trying direct instantiation.
19-06-06 08:19:38.380 [main] ERROR : com.zaxxer.hikari.pool.HikariPool.throwPoolInitializationException - HikariPool-1 - Exception during pool initialization.
com.mysql.cj.jdbc.exceptions.CommunicationsException: Communications link failure
The last packet sent successfully to the server was 0 milliseconds ago. The driver has not received any packets from the server.
at com.mysql.cj.jdbc.exceptions.SQLError.createCommunicationsException(SQLError.java:174)
at com.mysql.cj.jdbc.exceptions.SQLExceptionsMapping.translateException(SQLExceptionsMapping.java:64)
at com.mysql.cj.jdbc.ConnectionImpl.createNewIO(ConnectionImpl.java:835)
at com.mysql.cj.jdbc.ConnectionImpl.<init>(ConnectionImpl.java:455)
at com.mysql.cj.jdbc.ConnectionImpl.getInstance(ConnectionImpl.java:240)
at com.mysql.cj.jdbc.NonRegisteringDriver.connect(NonRegisteringDriver.java:207)
at com.zaxxer.hikari.util.DriverDataSource.getConnection(DriverDataSource.java:136)
at com.zaxxer.hikari.pool.PoolBase.newConnection(PoolBase.java:369)
at com.zaxxer.hikari.pool.PoolBase.newPoolEntry(PoolBase.java:198)
at com.zaxxer.hikari.pool.HikariPool.createPoolEntry(HikariPool.java:467)
at com.zaxxer.hikari.pool.HikariPool.checkFailFast(HikariPool.java:541)
at com.zaxxer.hikari.pool.HikariPool.<init>(HikariPool.java:115)
at com.zaxxer.hikari.HikariDataSource.getConnection(HikariDataSource.java:112)
at liquibase.integration.spring.SpringLiquibase.afterPropertiesSet(SpringLiquibase.java:302)
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1804)
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1741)
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:576)
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:498)
at org.springframework.beans.factory.support.AbstractBeanFactory.lambda$doGetBean$0(AbstractBeanFactory.java:320)
at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:222)
at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:318)
at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:199)
at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:307)
at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:199)
at org.springframework.context.support.AbstractApplicationContext.getBean(AbstractApplicationContext.java:1083)
at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:853)
at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:546)
at org.springframework.boot.web.servlet.context.ServletWebServerApplicationContext.refresh(ServletWebServerApplicationContext.java:142)
at org.springframework.boot.SpringApplication.refresh(SpringApplication.java:775)
at org.springframework.boot.SpringApplication.refreshContext(SpringApplication.java:397)
at org.springframework.boot.SpringApplication.run(SpringApplication.java:316)
at org.springframework.boot.SpringApplication.run(SpringApplication.java:1260)
at org.springframework.boot.SpringApplication.run(SpringApplication.java:1248)
at com.aurora.backend.Application.main(Application.java:19)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:498)
at org.springframework.boot.loader.MainMethodRunner.run(MainMethodRunner.java:48)
at org.springframework.boot.loader.Launcher.launch(Launcher.java:87)
at org.springframework.boot.loader.Launcher.launch(Launcher.java:50)
at org.springframework.boot.loader.JarLauncher.main(JarLauncher.java:51)
Caused by: com.mysql.cj.exceptions.CJCommunicationsException: Communications link failure
The last packet sent successfully to the server was 0 milliseconds ago. The driver has not received any packets from the server.
at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.lang.reflect.Constructor.newInstance(Constructor.java:423)
at com.mysql.cj.exceptions.ExceptionFactory.createException(ExceptionFactory.java:61)
at com.mysql.cj.exceptions.ExceptionFactory.createException(ExceptionFactory.java:105)
at com.mysql.cj.exceptions.ExceptionFactory.createException(ExceptionFactory.java:151)
at com.mysql.cj.exceptions.ExceptionFactory.createCommunicationsException(ExceptionFactory.java:167)
at com.mysql.cj.protocol.a.NativeSocketConnection.connect(NativeSocketConnection.java:91)
at com.mysql.cj.NativeSession.connect(NativeSession.java:152)
at com.mysql.cj.jdbc.ConnectionImpl.connectOneTryOnly(ConnectionImpl.java:955)
at com.mysql.cj.jdbc.ConnectionImpl.createNewIO(ConnectionImpl.java:825)
... 39 common frames omitted
Caused by: java.net.ConnectException: Connection refused (Connection refused)
at java.net.PlainSocketImpl.socketConnect(Native Method)
at java.net.AbstractPlainSocketImpl.doConnect(AbstractPlainSocketImpl.java:350)
at java.net.AbstractPlainSocketImpl.connectToAddress(AbstractPlainSocketImpl.java:206)
at java.net.AbstractPlainSocketImpl.connect(AbstractPlainSocketImpl.java:188)
at java.net.SocksSocketImpl.connect(SocksSocketImpl.java:392)
at java.net.Socket.connect(Socket.java:589)
at com.mysql.cj.protocol.StandardSocketFactory.connect(StandardSocketFactory.java:155)
at com.mysql.cj.protocol.a.NativeSocketConnection.connect(NativeSocketConnection.java:65)
... 42 common frames omitted
19-06-06 08:19:38.382 [main] WARN : o.s.b.w.s.c.AnnotationConfigServletWebServerApplicationContext.refresh - Exception encountered during context initialization - cancelling refresh attempt: org.springframework.beans.factory.BeanCreationException: Error creating bean with name 'liquibase' defined in class path resource [org/springframework/boot/autoconfigure/liquibase/LiquibaseAutoConfiguration$LiquibaseConfiguration.class]: Invocation of init method failed; nested exception is liquibase.exception.DatabaseException: com.mysql.cj.jdbc.exceptions.CommunicationsException: Communications link failure
The last packet sent successfully to the server was 0 milliseconds ago. The driver has not received any packets from the server.
19-06-06 08:19:38.407 [main] INFO : o.a.catalina.core.StandardService.log - Stopping service [Tomcat]
19-06-06 08:19:38.434 [main] INFO : o.s.b.a.l.ConditionEvaluationReportLoggingListener.logMessage -
Error starting ApplicationContext. To display the conditions report re-run your application with 'debug' enabled.
19-06-06 08:19:38.439 [main] ERROR : o.s.boot.SpringApplication.reportFailure - Application run failed
org.springframework.beans.factory.BeanCreationException: Error creating bean with name 'liquibase' defined in class path resource [org/springframework/boot/autoconfigure/liquibase/LiquibaseAutoConfiguration$LiquibaseConfiguration.class]: Invocation of init method failed; nested exception is liquibase.exception.DatabaseException: com.mysql.cj.jdbc.exceptions.CommunicationsException: Communications link failure
The last packet sent successfully to the server was 0 milliseconds ago. The driver has not received any packets from the server.
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1745)
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:576)
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:498)
at org.springframework.beans.factory.support.AbstractBeanFactory.lambda$doGetBean$0(AbstractBeanFactory.java:320)
at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:222)
at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:318)
at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:199)
at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:307)
at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:199)
at org.springframework.context.support.AbstractApplicationContext.getBean(AbstractApplicationContext.java:1083)
at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:853)
at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:546)
at org.springframework.boot.web.servlet.context.ServletWebServerApplicationContext.refresh(ServletWebServerApplicationContext.java:142)
at org.springframework.boot.SpringApplication.refresh(SpringApplication.java:775)
at org.springframework.boot.SpringApplication.refreshContext(SpringApplication.java:397)
at org.springframework.boot.SpringApplication.run(SpringApplication.java:316)
at org.springframework.boot.SpringApplication.run(SpringApplication.java:1260)
at org.springframework.boot.SpringApplication.run(SpringApplication.java:1248)
at com.aurora.backend.Application.main(Application.java:19)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:498)
at org.springframework.boot.loader.MainMethodRunner.run(MainMethodRunner.java:48)
at org.springframework.boot.loader.Launcher.launch(Launcher.java:87)
at org.springframework.boot.loader.Launcher.launch(Launcher.java:50)
at org.springframework.boot.loader.JarLauncher.main(JarLauncher.java:51)
Caused by: liquibase.exception.DatabaseException: com.mysql.cj.jdbc.exceptions.CommunicationsException: Communications link failure
The last packet sent successfully to the server was 0 milliseconds ago. The driver has not received any packets from the server.
at liquibase.integration.spring.SpringLiquibase.afterPropertiesSet(SpringLiquibase.java:307)
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1804)
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1741)
... 26 common frames omitted
Caused by: com.mysql.cj.jdbc.exceptions.CommunicationsException: Communications link failure
The last packet sent successfully to the server was 0 milliseconds ago. The driver has not received any packets from the server.
at com.mysql.cj.jdbc.exceptions.SQLError.createCommunicationsException(SQLError.java:174)
at com.mysql.cj.jdbc.exceptions.SQLExceptionsMapping.translateException(SQLExceptionsMapping.java:64)
at com.mysql.cj.jdbc.ConnectionImpl.createNewIO(ConnectionImpl.java:835)
at com.mysql.cj.jdbc.ConnectionImpl.<init>(ConnectionImpl.java:455)
at com.mysql.cj.jdbc.ConnectionImpl.getInstance(ConnectionImpl.java:240)
at com.mysql.cj.jdbc.NonRegisteringDriver.connect(NonRegisteringDriver.java:207)
at com.zaxxer.hikari.util.DriverDataSource.getConnection(DriverDataSource.java:136)
at com.zaxxer.hikari.pool.PoolBase.newConnection(PoolBase.java:369)
at com.zaxxer.hikari.pool.PoolBase.newPoolEntry(PoolBase.java:198)
at com.zaxxer.hikari.pool.HikariPool.createPoolEntry(HikariPool.java:467)
at com.zaxxer.hikari.pool.HikariPool.checkFailFast(HikariPool.java:541)
at com.zaxxer.hikari.pool.HikariPool.<init>(HikariPool.java:115)
at com.zaxxer.hikari.HikariDataSource.getConnection(HikariDataSource.java:112)
at liquibase.integration.spring.SpringLiquibase.afterPropertiesSet(SpringLiquibase.java:302)
... 28 common frames omitted
Caused by: com.mysql.cj.exceptions.CJCommunicationsException: Communications link failure
The last packet sent successfully to the server was 0 milliseconds ago. The driver has not received any packets from the server.
at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.lang.reflect.Constructor.newInstance(Constructor.java:423)
at com.mysql.cj.exceptions.ExceptionFactory.createException(ExceptionFactory.java:61)
at com.mysql.cj.exceptions.ExceptionFactory.createException(ExceptionFactory.java:105)
at com.mysql.cj.exceptions.ExceptionFactory.createException(ExceptionFactory.java:151)
at com.mysql.cj.exceptions.ExceptionFactory.createCommunicationsException(ExceptionFactory.java:167)
at com.mysql.cj.protocol.a.NativeSocketConnection.connect(NativeSocketConnection.java:91)
at com.mysql.cj.NativeSession.connect(NativeSession.java:152)
at com.mysql.cj.jdbc.ConnectionImpl.connectOneTryOnly(ConnectionImpl.java:955)
at com.mysql.cj.jdbc.ConnectionImpl.createNewIO(ConnectionImpl.java:825)
... 39 common frames omitted
Caused by: java.net.ConnectException: Connection refused (Connection refused)
at java.net.PlainSocketImpl.socketConnect(Native Method)
at java.net.AbstractPlainSocketImpl.doConnect(AbstractPlainSocketImpl.java:350)
at java.net.AbstractPlainSocketImpl.connectToAddress(AbstractPlainSocketImpl.java:206)
at java.net.AbstractPlainSocketImpl.connect(AbstractPlainSocketImpl.java:188)
at java.net.SocksSocketImpl.connect(SocksSocketImpl.java:392)
at java.net.Socket.connect(Socket.java:589)
at com.mysql.cj.protocol.StandardSocketFactory.connect(StandardSocketFactory.java:155)
at com.mysql.cj.protocol.a.NativeSocketConnection.connect(NativeSocketConnection.java:65)
... 42 common frames omitted

Seems you connect to you mysql database on you local machine, and put the host name as local host. Please try docker run --net=host -p 8000:8000 backend to use host network, or use the ip address directly.

tomcat7 and postgresql for SQLNestedException: Cannot create PoolableConnectionFactory

I get these errors when restarting tomcat7 and postgres services
[localhost-startStop-1] ERROR util.JDBCExceptionReporter - Cannot create PoolableConnectionFactory (Connection refused. Check that the hostname and port are correct and that the postmaster is accepting TCP/IP connections.)
[localhost-startStop-1] ERROR util.JDBCExceptionReporter - Cannot create PoolableConnectionFactory (Connection refused. Check that the hostname and port are correct and that the postmaster is accepting TCP/IP connections.)
[localhost-startStop-1] ERROR hbm2ddl.SchemaUpdate - could not get database metadata
org.apache.commons.dbcp.SQLNestedException: Cannot create PoolableConnectionFactory (Connection refused. Check that the hostname and port are correct and that the postmaster is accepting TCP/IP connections.)
at org.apache.commons.dbcp.BasicDataSource.createPoolableConnectionFactory(BasicDataSource.java:1549)
at org.apache.commons.dbcp.BasicDataSource.createDataSource(BasicDataSource.java:1388)
at org.apache.commons.dbcp.BasicDataSource.getConnection(BasicDataSource.java:1044)
at org.springframework.orm.hibernate3.LocalDataSourceConnectionProvider.getConnection(LocalDataSourceConnectionProvider.java:81)
at org.hibernate.tool.hbm2ddl.SuppliedConnectionProviderConnectionHelper.prepare(SuppliedConnectionProviderConnectionHelper.java:51)
at org.hibernate.tool.hbm2ddl.SchemaUpdate.execute(SchemaUpdate.java:168)
at org.hibernate.impl.SessionFactoryImpl.<init>(SessionFactoryImpl.java:375)
at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1872)
at org.springframework.orm.hibernate3.LocalSessionFactoryBean.newSessionFactory(LocalSessionFactoryBean.java:860)
at org.springframework.orm.hibernate3.LocalSessionFactoryBean.buildSessionFactory(LocalSessionFactoryBean.java:779)
at org.springframework.orm.hibernate3.AbstractSessionFactoryBean.afterPropertiesSet(AbstractSessionFactoryBean.java:211)
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1479)
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1419)
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:518)
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:455)
at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:293)
at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:222)
at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:290)
at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:192)
at org.springframework.beans.factory.support.DefaultListableBeanFactory.findAutowireCandidates(DefaultListableBeanFactory.java:848)
at org.springframework.beans.factory.support.DefaultListableBeanFactory.doResolveDependency(DefaultListableBeanFactory.java:790)
at org.springframework.beans.factory.support.DefaultListableBeanFactory.resolveDependency(DefaultListableBeanFactory.java:707)
at org.springframework.beans.factory.annotation.AutowiredAnnotationBeanPostProcessor$AutowiredFieldElement.inject(AutowiredAnnotationBeanPostProcessor.java:478)
at org.springframework.beans.factory.annotation.InjectionMetadata.inject(InjectionMetadata.java:84)
at org.springframework.beans.factory.annotation.AutowiredAnnotationBeanPostProcessor.postProcessPropertyValues(AutowiredAnnotationBeanPostProcessor.java:284)
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.populateBean(AbstractAutowireCapableBeanFactory.java:1073)
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:516)
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:455)
at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:293)
at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:222)
at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:290)
at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:192)
at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:585)
at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:895)
at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:425)
at org.springframework.web.servlet.FrameworkServlet.createWebApplicationContext(FrameworkServlet.java:467)
at org.springframework.web.servlet.FrameworkServlet.createWebApplicationContext(FrameworkServlet.java:483)
at org.springframework.web.servlet.FrameworkServlet.initWebApplicationContext(FrameworkServlet.java:358)
at org.springframework.web.servlet.FrameworkServlet.initServletBean(FrameworkServlet.java:325)
at org.springframework.web.servlet.HttpServletBean.init(HttpServletBean.java:127)
at javax.servlet.GenericServlet.init(GenericServlet.java:158)
at org.apache.catalina.core.StandardWrapper.initServlet(StandardWrapper.java:1284)
at org.apache.catalina.core.StandardWrapper.loadServlet(StandardWrapper.java:1197)
at org.apache.catalina.core.StandardWrapper.load(StandardWrapper.java:1087)
at org.apache.catalina.core.StandardContext.loadOnStartup(StandardContext.java:5290)
at org.apache.catalina.core.StandardContext.startInternal(StandardContext.java:5580)
at org.apache.catalina.util.LifecycleBase.start(LifecycleBase.java:150)
at org.apache.catalina.core.ContainerBase.addChildInternal(ContainerBase.java:901)
at org.apache.catalina.core.ContainerBase.addChild(ContainerBase.java:877)
at org.apache.catalina.core.StandardHost.addChild(StandardHost.java:652)
at org.apache.catalina.startup.HostConfig.deployWAR(HostConfig.java:1095)
at org.apache.catalina.startup.HostConfig$DeployWar.run(HostConfig.java:1930)
at java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:511)
at java.util.concurrent.FutureTask.run(FutureTask.java:266)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1142)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:617)
at java.lang.Thread.run(Thread.java:745)
Caused by: org.postgresql.util.PSQLException: Connection refused. Check that the hostname and port are correct and that the postmaster is accepting TCP/IP connections.
at org.postgresql.core.v3.ConnectionFactoryImpl.openConnectionImpl(ConnectionFactoryImpl.java:136)
at org.postgresql.core.ConnectionFactory.openConnection(ConnectionFactory.java:66)
at org.postgresql.jdbc2.AbstractJdbc2Connection.<init>(AbstractJdbc2Connection.java:125)
at org.postgresql.jdbc3.AbstractJdbc3Connection.<init>(AbstractJdbc3Connection.java:30)
at org.postgresql.jdbc3g.AbstractJdbc3gConnection.<init>(AbstractJdbc3gConnection.java:22)
at org.postgresql.jdbc4.AbstractJdbc4Connection.<init>(AbstractJdbc4Connection.java:30)
at org.postgresql.jdbc4.Jdbc4Connection.<init>(Jdbc4Connection.java:24)
at org.postgresql.Driver.makeConnection(Driver.java:393)
at org.postgresql.Driver.connect(Driver.java:267)
at org.apache.commons.dbcp.DriverConnectionFactory.createConnection(DriverConnectionFactory.java:38)
at org.apache.commons.dbcp.PoolableConnectionFactory.makeObject(PoolableConnectionFactory.java:582)
at org.apache.commons.dbcp.BasicDataSource.validateConnectionFactory(BasicDataSource.java:1556)
at org.apache.commons.dbcp.BasicDataSource.createPoolableConnectionFactory(BasicDataSource.java:1545)
... 56 more
Caused by: java.net.ConnectException: Connection refused
at java.net.PlainSocketImpl.socketConnect(Native Method)
at java.net.AbstractPlainSocketImpl.doConnect(AbstractPlainSocketImpl.java:350)
at java.net.AbstractPlainSocketImpl.connectToAddress(AbstractPlainSocketImpl.java:206)
at java.net.AbstractPlainSocketImpl.connect(AbstractPlainSocketImpl.java:188)
at java.net.SocksSocketImpl.connect(SocksSocketImpl.java:392)
at java.net.Socket.connect(Socket.java:589)
at java.net.Socket.connect(Socket.java:538)
at java.net.Socket.<init>(Socket.java:434)
at java.net.Socket.<init>(Socket.java:211)
at org.postgresql.core.PGStream.<init>(PGStream.java:62)
at org.postgresql.core.v3.ConnectionFactoryImpl.openConnectionImpl(ConnectionFactoryImpl.java:76)
... 68 more
[localhost-startStop-1] ERROR hbm2ddl.SchemaUpdate - could not complete schema update
org.apache.commons.dbcp.SQLNestedException: Cannot create PoolableConnectionFactory (Connection refused. Check that the hostname and port are correct and that the postmaster is accepting TCP/IP connections.)
at org.apache.commons.dbcp.BasicDataSource.createPoolableConnectionFactory(BasicDataSource.java:1549)
at org.apache.commons.dbcp.BasicDataSource.createDataSource(BasicDataSource.java:1388)
at org.apache.commons.dbcp.BasicDataSource.getConnection(BasicDataSource.java:1044)
at org.springframework.orm.hibernate3.LocalDataSourceConnectionProvider.getConnection(LocalDataSourceConnectionProvider.java:81)
at org.hibernate.tool.hbm2ddl.SuppliedConnectionProviderConnectionHelper.prepare(SuppliedConnectionProviderConnectionHelper.java:51)
at org.hibernate.tool.hbm2ddl.SchemaUpdate.execute(SchemaUpdate.java:168)
at org.hibernate.impl.SessionFactoryImpl.<init>(SessionFactoryImpl.java:375)
at org.hibernate.cfg.Configuration.buildSessionFactory(Configuration.java:1872)
at org.springframework.orm.hibernate3.LocalSessionFactoryBean.newSessionFactory(LocalSessionFactoryBean.java:860)
at org.springframework.orm.hibernate3.LocalSessionFactoryBean.buildSessionFactory(LocalSessionFactoryBean.java:779)
at org.springframework.orm.hibernate3.AbstractSessionFactoryBean.afterPropertiesSet(AbstractSessionFactoryBean.java:211)
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1479)
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1419)
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:518)
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:455)
at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:293)
at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:222)
at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:290)
at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:192)
at org.springframework.beans.factory.support.DefaultListableBeanFactory.findAutowireCandidates(DefaultListableBeanFactory.java:848)
at org.springframework.beans.factory.support.DefaultListableBeanFactory.doResolveDependency(DefaultListableBeanFactory.java:790)
at org.springframework.beans.factory.support.DefaultListableBeanFactory.resolveDependency(DefaultListableBeanFactory.java:707)
at org.springframework.beans.factory.annotation.AutowiredAnnotationBeanPostProcessor$AutowiredFieldElement.inject(AutowiredAnnotationBeanPostProcessor.java:478)
at org.springframework.beans.factory.annotation.InjectionMetadata.inject(InjectionMetadata.java:84)
at org.springframework.beans.factory.annotation.AutowiredAnnotationBeanPostProcessor.postProcessPropertyValues(AutowiredAnnotationBeanPostProcessor.java:284)
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.populateBean(AbstractAutowireCapableBeanFactory.java:1073)
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:516)
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:455)
at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:293)
at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:222)
at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:290)
at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:192)
at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:585)
at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:895)
at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:425)
at org.springframework.web.servlet.FrameworkServlet.createWebApplicationContext(FrameworkServlet.java:467)
at org.springframework.web.servlet.FrameworkServlet.createWebApplicationContext(FrameworkServlet.java:483)
at org.springframework.web.servlet.FrameworkServlet.initWebApplicationContext(FrameworkServlet.java:358)
at org.springframework.web.servlet.FrameworkServlet.initServletBean(FrameworkServlet.java:325)
at org.springframework.web.servlet.HttpServletBean.init(HttpServletBean.java:127)
at javax.servlet.GenericServlet.init(GenericServlet.java:158)
at org.apache.catalina.core.StandardWrapper.initServlet(StandardWrapper.java:1284)
at org.apache.catalina.core.StandardWrapper.loadServlet(StandardWrapper.java:1197)
at org.apache.catalina.core.StandardWrapper.load(StandardWrapper.java:1087)
at org.apache.catalina.core.StandardContext.loadOnStartup(StandardContext.java:5290)
at org.apache.catalina.core.StandardContext.startInternal(StandardContext.java:5580)
at org.apache.catalina.util.LifecycleBase.start(LifecycleBase.java:150)
at org.apache.catalina.core.ContainerBase.addChildInternal(ContainerBase.java:901)
at org.apache.catalina.core.ContainerBase.addChild(ContainerBase.java:877)
at org.apache.catalina.core.StandardHost.addChild(StandardHost.java:652)
at org.apache.catalina.startup.HostConfig.deployWAR(HostConfig.java:1095)
at org.apache.catalina.startup.HostConfig$DeployWar.run(HostConfig.java:1930)
at java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:511)
at java.util.concurrent.FutureTask.run(FutureTask.java:266)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1142)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:617)
at java.lang.Thread.run(Thread.java:745)
Caused by: org.postgresql.util.PSQLException: Connection refused. Check that the hostname and port are correct and that the postmaster is accepting TCP/IP connections.
at org.postgresql.core.v3.ConnectionFactoryImpl.openConnectionImpl(ConnectionFactoryImpl.java:136)
at org.postgresql.core.ConnectionFactory.openConnection(ConnectionFactory.java:66)
at org.postgresql.jdbc2.AbstractJdbc2Connection.<init>(AbstractJdbc2Connection.java:125)
at org.postgresql.jdbc3.AbstractJdbc3Connection.<init>(AbstractJdbc3Connection.java:30)
at org.postgresql.jdbc3g.AbstractJdbc3gConnection.<init>(AbstractJdbc3gConnection.java:22)
at org.postgresql.jdbc4.AbstractJdbc4Connection.<init>(AbstractJdbc4Connection.java:30)
at org.postgresql.jdbc4.Jdbc4Connection.<init>(Jdbc4Connection.java:24)
at org.postgresql.Driver.makeConnection(Driver.java:393)
at org.postgresql.Driver.connect(Driver.java:267)
at org.apache.commons.dbcp.DriverConnectionFactory.createConnection(DriverConnectionFactory.java:38)
at org.apache.commons.dbcp.PoolableConnectionFactory.makeObject(PoolableConnectionFactory.java:582)
at org.apache.commons.dbcp.BasicDataSource.validateConnectionFactory(BasicDataSource.java:1556)
at org.apache.commons.dbcp.BasicDataSource.createPoolableConnectionFactory(BasicDataSource.java:1545)
... 56 more
Caused by: java.net.ConnectException: Connection refused
at java.net.PlainSocketImpl.socketConnect(Native Method)
at java.net.AbstractPlainSocketImpl.doConnect(AbstractPlainSocketImpl.java:350)
at java.net.AbstractPlainSocketImpl.connectToAddress(AbstractPlainSocketImpl.java:206)
at java.net.AbstractPlainSocketImpl.connect(AbstractPlainSocketImpl.java:188)
at java.net.SocksSocketImpl.connect(SocksSocketImpl.java:392)
at java.net.Socket.connect(Socket.java:589)
at java.net.Socket.connect(Socket.java:538)
at java.net.Socket.<init>(Socket.java:434)
at java.net.Socket.<init>(Socket.java:211)
at org.postgresql.core.PGStream.<init>(PGStream.java:62)
at org.postgresql.core.v3.ConnectionFactoryImpl.openConnectionImpl(ConnectionFactoryImpl.java:76)
... 68 more
I have followed xnat tutorial so I am not sure what went wrong
Here's the localhost log:
http://pastebin.com/3qtEJZ79

This is a communications issue with PostgreSQL, not really an XNAT issue. Either your PostgreSQL server isn't configured to listen to TCP connections or there's a firewall issue. It's probably one of the problems described here. If I had to guess, it's probably the TCP connection issue. Edit postgresql.conf (same folder as pg_hba.conf) and look for a line with the string listen_addresses. By default, this looks like this:
#listen_addresses = 'localhost'
Modify it to be:
listen_addresses = '*'
Then restart the postgresql service and see what happens.