How to pull environment variables with Helm charts - kubernetes

I have my deployment.yaml file within the templates directory of Helm charts with several environment variables for the container I will be running using Helm.
Now I want to be able to pull the environment variables locally from whatever machine the helm is ran so I can hide the secrets that way.
How do I pass this in and have helm grab the environment variables locally when I use Helm to run the application?
Here is some part of my deployment.yaml file
...
...
spec:
restartPolicy: Always
containers:
- name: sample-app
image: "sample-app:latest"
imagePullPolicy: Always
env:
- name: "USERNAME"
value: "app-username"
- name: "PASSWORD"
value: "28sin47dsk9ik"
...
...
How can I pull the value of USERNAME and PASSWORD from local environment variables when I run helm?
Is this possible? If yes, then how do I do this?

You can export the variable and use it while running helm install.
Before that, you have to modify your chart so that the value can be set while installation.
Skip this part, if you already know, how to setup template fields.
As you don't want to expose the data, so it's better to have it saved as secret in kubernetes.
First of all, add this two lines in your Values file, so that these two values can be set from outside.
username: root
password: password
Now, add a secret.yaml file inside your template folder. and, copy this code snippet into that file.
apiVersion: v1
kind: Secret
metadata:
name: {{ .Release.Name }}-auth
data:
password: {{ .Values.password | b64enc }}
username: {{ .Values.username | b64enc }}
Now tweak your deployment yaml template and make changes in env section, like this
...
...
spec:
restartPolicy: Always
containers:
- name: sample-app
image: "sample-app:latest"
imagePullPolicy: Always
env:
- name: "USERNAME"
valueFrom:
secretKeyRef:
key: username
name: {{ .Release.Name }}-auth
- name: "PASSWORD"
valueFrom:
secretKeyRef:
key: password
name: {{ .Release.Name }}-auth
...
...
If you have modified your template correctly for --set flag,
you can set this using environment variable.
$ export USERNAME=root-user
Now use this variable while running helm install,
$ helm install --set username=$USERNAME ./mychart
If you run this helm install in dry-run mode, you can verify the changes,
$ helm install --dry-run --set username=$USERNAME --debug ./mychart
[debug] Created tunnel using local port: '44937'
[debug] SERVER: "127.0.0.1:44937"
[debug] Original chart version: ""
[debug] CHART PATH: /home/maruf/go/src/github.com/the-redback/kubernetes-yaml-drafts/helm-charts/mychart
NAME: irreverant-meerkat
REVISION: 1
RELEASED: Fri Apr 20 03:29:11 2018
CHART: mychart-0.1.0
USER-SUPPLIED VALUES:
username: root-user
COMPUTED VALUES:
password: password
username: root-user
HOOKS:
MANIFEST:
---
# Source: mychart/templates/secret.yaml
apiVersion: v1
kind: Secret
metadata:
name: irreverant-meerkat-auth
data:
password: password
username: root-user
---
# Source: mychart/templates/deployment.yaml
apiVersion: apps/v1
kind: Deployment
metadata:
name: irreverant-meerkat
labels:
app: irreverant-meerkat
spec:
replicas: 1
template:
metadata:
name: irreverant-meerkat
labels:
app: irreverant-meerkat
spec:
containers:
- name: irreverant-meerkat
image: alpine
env:
- name: "USERNAME"
valueFrom:
secretKeyRef:
key: username
name: irreverant-meerkat-auth
- name: "PASSWORD"
valueFrom:
secretKeyRef:
key: password
name: irreverant-meerkat-auth
imagePullPolicy: IfNotPresent
restartPolicy: Always
selector:
matchLabels:
app: irreverant-meerkat
You can see that the data of username in secret has changed to root-user.
I have added this example into github repo.
There is also some discussion in kubernetes/helm repo regarding this. You can see this issue to know about all other ways to use environment variables.

you can pass env key value from the value yaml by setting the deployment yaml as below :
spec:
restartPolicy: Always
containers:
- name: sample-app
image: "sample-app:latest"
imagePullPolicy: Always
env:
{{- range $name, $value := .Values.env }}
- name: {{ $name }}
value: {{ $value }}
{{- end }}
in the values.yaml :
env:
- name: "USERNAME"
value: ""
- name: "PASSWORD"
value: ""
when you install the chart you can pass the username password value
helm install chart_name --name release_name --set env.USERNAME="app-username" --set env.PASSWORD="28sin47dsk9ik"

For those looking to use data structures instead lists for their env variable files, this has worked for me:
spec:
containers:
- name: {{ .Chart.Name }}
image: "{{ .Values.image.repository }}:{{ .Values.image.tag }}"
imagePullPolicy: {{ .Values.image.pullPolicy }}
env:
{{- range $key, $val := .Values.env }}
- name: {{ $key }}
value: {{ $val | quote }}
{{- end }}
values.yaml:
env:
FOO: "BAR"
USERNAME: "CHANGEME"
PASWORD: "CHANGEME"
That way I can access specific values by name in other parts of the helm chart and pass the sensitive values via helm command line.

To get away from having to set each secret manually, you can use:
export MY_SECRET=123
envsubst < values.yaml | helm install my-release . --values -
where ${MY_SECRET} is referenced in your values.yaml file like:
mychart:
secrets:
secret_1: ${MY_SECRET}

Helm 3.1 supports post rendering (https://helm.sh/docs/topics/advanced/#post-rendering) which passes the manifest to a script before it is actually send to Kubernetes API. Post rendering allows to manipulate the manifest in multiple ways (e.g. use kustomize on top of Helm).
The simplest form of a post renderer which replaces predefined environment values could look like this:
#!/bin/sh
envsubst <&0
Note this will replace every occurance of $<VARNAME> which could collide with variables in the templates like shell scripts in liveness probes. So better explicitly define the variables you want to get replaced: envsubst '${USERNAME} ${PASSWORD}' <&0
Define your env variables in the shell:
export USERNAME=john PASSWORD=my-secret
In the tempaltes (e.g. secret.yaml) use the values defined in the values.yaml:
apiVersion: v1
kind: Secret
metadata:
name: {{ .Release.Name }}-auth
data:
username: {{ .Values.username }}
password: {{ .Values.password }}
Note that you can not apply string transformations like b64enc on the strings as the get injected in the manifest after Helm has already processed all YAML files. Instead you can encode them in the post renderer if required.
In the values.yaml use the variable placeholders:
...
username: ${USERNAME}
password: ${PASSWORD}
The parameter --post-renderer is supported in several Helm commands e.g.
helm install --dry-run --post-renderer ./my-post-renderer.sh my-chart
By using the post renderer the variables/placeholders automatically get replaced by envsubst without additional scripting.

i guess the question is how to lookup for env variable inside chart by looking at the env variables it-self and not by passing this with --set.
for example: i have set a key "my_db_password" and want to change the values by looking at the value in env variable is not supported.
I am not very sure on GO template, but I guess this is disabled as what they explain in helm documentation. "We removed two for security reasons: env and expandenv (which would have given chart authors access to Tiller’s environment)." https://helm.sh/docs/developing_charts/#know-your-template-functions

I think one simple way is just set the value directly. for example, in your Values.yml, you want pass the service name:
...
myapp:
service:
name: ""
...
Your service.yml just use this value as usual:
{{ .Values.myapp.service.name }}
Then to set the value, use --set, like: --set myapp.service.name=hello
Then, for example, if you want to use the environment variable, do export before that:
#set your env variable
export MYAPP_SERVICE=hello
#pass it to helm
helm install myapp --set myapp.service.name=$MYAPP_SERVICE.
If you do debug like:
helm install myapp --set myapp.service.name=$MYAPP_SERVICE --debug --dry-run ./myapp
You can see this information at the beginning of your yml which your "hello" was set.
USER-SUPPLIED VALUES:
myapp:
service:
name: hello

As an alternative to pass local environment variables, I like to store these kind of sensitive values in a folder ignored by your VCS, and use Helm .Files object to read them and provide the values to your templates.
In my opinion, the advantage is that it doesn't require the host that will operate the Helm chart to set any OS specific environment variable, and makes the chart self-contained whilst not exposing these values.
# In a folder not committed, e.g. <chart_base_directory>/secrets
username: app-username
password: 28sin47dsk9ik
Then in your chart templates:
# In deployment.yaml file
---
apiVersion: v1
kind: Secret
metadata:
name: {{ .Release.Name }}-auth
stringData::
{{ .Files.Get "<chart_base_directory>/secrets" | indent 2 }}
As a result, everything the Chart needs is accessible from within the directory where you define everything else. And instead of setting system-wide env vars, it just needs a file.
This file can be generated automatically, or copied from a committed template with dummy values. Helm will also fire an error early on install/update if this isn't defined, as opposed to creating your secret with username="" and password="" if your env vars haven't been defined, which only becomes obvious once your changes are applied to the cluster.

Related

Helm template syntax when using subcharts?

I asked Use one Helm chart for ALL microservices? and now I'm trying to implement the answer I accepted, i.e., using sub charts. (Note: If there's a better answer for that post, please put it in that post, not here.)
Per the answer I accepted, I have the following directory structure
my-deployment-repo/
|- base-microservice/
|- templates/
|- deployment.yml
|- service.yml
|- Chart.yaml
|- values.yaml
|- myapp/
|- Chart.yaml
|- values.yaml
base-microservice/values.yaml file has
image:
name: ""
version: ""
repository: 01234567890.dkr.ecr.us-east-1.amazonaws.com
pullPolicy: IfNotPresent
# Overrides the image tag whose default is the chart appVersion.
tag: ""
service:
type: NodePort
port: 5000
# More key/value pairs defined
myapp/Chart.yaml has
apiVersion: v2
name: myapp
description: A Helm chart for Kubernetes
...
dependencies:
- alias: my-microservice-1
name: base-microservice
version: "0.1.0"
repository: file://../base-microservice
- alias: my-microservice-2
name: base-microservice
version: "0.1.0"
repository: file://../base-microservice
myapp/values.yaml simply has this because I want myapp to use ALL the values in base-microservice/values.yaml except for the values I provide here.
my-microservice-1:
image:
name: foo
version: 1.2.3
my-microservice-2:
image:
name: bar
version: 4.5.6
So now when I do a...
$ helm update ./myapp
$ helm install myapp myapp/
...I want to be able to get, for example, the deployment for the alias microservice-1
apiVersion: apps/v1
kind: Deployment
...
spec:
...
template:
...
spec:
...
containers:
- name: foo # image name for microservice-1 alias
# These are from the different values.yaml files
# <repository from base-microservice>/<image name from myapp>:v<ersion from myapp>
image: 01234567890.dkr.ecr.us-east-1.amazonaws.com/foo:1.2.3
IOW, what should the base-microserivce/templates/deployment.yaml syntax be to...
spec.template.spec.containers.name: {{ what should be here to produce "foo" }} and
spec.template.spec.containers.image: {{ what should be here to produce "01234567890.dkr.ecr.us-east-1.amazonaws.com/foo:1.2.3" }}
I hope that makes sense. TIA!
When the template file is eventually rendered, .Values will be a subset specific to this subchart. So in your template code, just use .Values the same way you would if it were a standalone chart.
containers:
- name: foo {{-/* not templated */}}
image: {{ with .Values.image }}{{ .repository }}/{{ .name }}:{{ .version }}{{ end }}
I've intentionally chosen to not template name in this example. A container name is only useful in a couple of very specific contexts (to review kubectl logs in a multi-container Pod, for example) and IME it's much easier to set it to a fixed name than to try to template it. You could use {{ .Values.image.name }} here as well if you wanted to.

Using SecretProviderClass with Ingress basic Auth

I'm trying to setup Basic auth in ingress. The "nginx.ingress.kubernetes.io/auth-secret" I have stored in K8s secrets using SecretProviderClass. The secret is mounted correctly. As per this documentation (https://kubernetes.github.io/ingress-nginx/examples/auth/basic/), the secret should have "data.auth" inside the key. Hence, in my deployment file I created an environment variable named "BASIC_AUTH_VALUE" to achieve this.
env:
- name: SECRET_AUTH
valueFrom:
secretKeyRef:
name: {{ include "ui.fullname" . }}-azure-csi
key: FRONTEND_BASIC_AUTH
optional: false
- name: BASIC_AUTH_VALUE
value: data.auth:$(SECRET_AUTH)
Then in my ingress file, I set the annotations as below
nginx.ingress.kubernetes.io/auth-secret: BASIC_AUTH_VALUE
Even then I still get 503 error. The pod is up and running and there isn't anything in the logs that I can find.
I have tried several options but all in vain so far. Any guidance will be of great help. Thanks.
I found a solution. I had to adapt the SecretProviderClass's secretObjects as below
secretObjects:
- data:
{{- range $secret := .Values.azureSecretsCSI.secrets }}
- key: {{ $secret.k8sName }}
objectName: {{ $secret.azName }}
{{- end }}
secretName: {{ include "ui.fullname" . }}-auth-azure-csi
type: Opaque
Where "{{ $secret.k8sName }}" must be "auth" is derived from values.yaml file as below
azureSecretsCSI:
tenantId: XXX
kvName: XXX
secrets:
- azName: XXX
k8sName: auth
And then in ingress annotations add name of the secret provider class instead of a secret name or an environment variable (which I was trying to do and which wasn't working)
nginx.ingress.kubernetes.io/auth-secret: {{ include "ui.fullname" . }}-auth-azure-csi

kubernetes cache clear and handling

I am using Kubernetes with Helm 3.8.0, with windows docker desktop configured on WSL2.
Sometime, after running: helm install, and retrieve a container, the container that is created behind sense, is an old container that created before (even after restarting the computer).
i.e: Now the yaml is declared with password: 12345, and database: test. before I tried to run the container yaml with password: 11111, and database: my_database.
Now when I do helm install mychart ./mychart --namespace test-chart --create-namespace for the current folder chart, the container is running with password: 11111 and database: my_datatbase, instead of the new parameters provided. There is no current yaml code with the old password, so I don't understand why the docker is run with the old one.
I did several actions, such as docker system prune, restarting Windows Docker Desktop, but still I get the old container, that cannot be seen, even in Windows Docker Desktop, I have checked the option in: Settings -> Kubernetes -> Show System Containers -> Show system containers.
After some investigations, I realized that that may be because of Kubernetes has it's own garbage collection handling of containers, and that is why I may refer to old container, even I didn't mean to.
In my case, I am creating a job template (I didn't put any line that reference this job in the _helpers.tpl file - I never changed that file, and I don't know whether that may cause a problem).
Here is my job template:
apiVersion: batch/v1
kind: Job
metadata:
name: {{ include "myChart.fullname" . }}-migration
labels:
name: {{ include "myChart.fullname" . }}-migration
annotations:
"helm.sh/hook": pre-install,pre-upgrade
"helm.sh/hook-weight": "-300"
"helm.sh/hook-delete-policy": before-hook-creation
spec:
parallelism: 1
completions: 1
backoffLimit: 1
template:
metadata:
labels:
app: {{ template "myChart.name" . }}
release: {{ .Release.Namespace }}
spec:
initContainers:
- name: wait-mysql
image: {{ .Values.mysql.image }}
imagePullPolicy: IfNotPresent
env:
- name: MYSQL_ROOT_PASSWORD
value: "12345"
- name: MYSQL_DATABASE
value: test
command:
- /bin/sh
- -c
- |
service mysql start &
until mysql -uroot -p12345 -e 'show databases'; do
echo `date +%H:%M:%S`' - Waiting for mysql...'
sleep 5
done
containers:
- name: migration
image: "{{ .Values.image.repository }}:{{ .Values.image.tag | default .Chart.AppVersion }}"
command: {{- toYaml .Values.image.entrypoint | nindent 12 }}
args: {{- toYaml .Values.image.cmd | nindent 12}}
restartPolicy: Never
In the job - there is a database, which is first created, and after that it has data that is populated with code.
Also, are the annotations (hooks) are necessary?
After running helm install myChart ./myChart --namespace my-namespace --create-namespace, I realized that I am using very old container, which I don't really need.
I didn't understand if I write the meta data, as the following example (in: Garbage Collection) really help, and what to put in uid, whether I don't know it, or don't have it.
metadata:
...
ownerReferences:
- apiVersion: extensions/v1beta1
controller: true
blockOwnerDeletion: true
kind: ReplicaSet
name: my-repset
uid: d9607e19-f88f-11e6-a518-42010a800195
Sometimes I really want to reference existing pod (or container) from several templates (use the same container, which is not stateless, such as database container - one template for the pod and the other for the job) - How can I do that, also?
Is there any command (in command line, or a kind of method) that clear all the cached in Garbage Collection, or not use Garbage Collection at all? (What are the main benefits for the GC of Kubernetes?)

why does helm do not accept kubernetes secrets for deployment?

i have created secret inside Kubernetes cluster for image pull from private repository and added it to helm values.yml.
after deployment start (helm install chart /chart) i see that helm deployment is crashing all the time by timeout.
"kubectl describe pod" shows me an error: "imagePullBackoff" and "wrong credentials".
at the same time if to deploy the same app with kubectl apply -f deployment.yml file this secret works as expected and image is downloaded without any issues and deployment is successful.
the question is how to force this secret to work with helm charts?
Try creating secret using this command:
kubectl create secret docker-registry mysecret --docker-server=<docker-repo> --docker-username=<docker-username> --docker-password=<docker-password> --docker-email=<email>
(Provide your respective inputs in the above command)
From helm document
First, assume that the credentials are defined in the values.yaml file like so:
imageCredentials:
registry: quay.io
username: someone
password: sillyness
We then define our helper template as follows:
{{- define "imagePullSecret" }}
{{- printf "{\"auths\": {\"%s\": {\"auth\": \"%s\"}}}" .Values.imageCredentials.registry (printf "%s:%s" .Values.imageCredentials.username .Values.imageCredentials.password | b64enc) | b64enc }}
{{- end }}
Finally, we use the helper template in a larger template to create the Secret manifest:
apiVersion: v1
kind: Secret
metadata:
name: myregistrykey
type: kubernetes.io/dockerconfigjson
data:
.dockerconfigjson: {{ template "imagePullSecret" . }}
In deployment
containers:
- name: private-reg-container
image: <your-private-image>
imagePullSecrets:
- name: myregistrykey

Kubernetes w/ helm: MountVolume.SetUp failed for volume "secret" : invalid character '\r' in string literal

I'm using a script to run helm command which upgrades my k8s deployment.
Before I've used kubectl to directly deploy, as I've move to helm and started using charts, I see an error after deploying on the k8s pods:
MountVolume.SetUp failed for volume "secret" : invalid character '\r' in string literal
My script looks similar to:
value1="foo"
value2="bar"
helm upgrade deploymentName --debug --install --atomic --recreate-pods --reset-values --force --timeout 900 pathToChartDir --set value1 --set value2
The deployment.yaml is as following:
apiVersion: apps/v1
kind: Deployment
metadata:
name: deploymentName
spec:
selector:
matchLabels:
run: deploymentName
replicas: 2
template:
metadata:
labels:
run: deploymentName
app: appName
spec:
containers:
- name: deploymentName
image: {{ .Values.image.acr.registry }}/{{ .Values.image.name }}:{{ .Values.image.tag }}
volumeMounts:
- name: secret
mountPath: /secrets
readOnly: true
ports:
- containerPort: 1234
env:
- name: DOTENV_CONFIG_PATH
value: "/secrets/env"
volumes:
- name: secret
flexVolume:
driver: "azure/kv"
secretRef:
name: "kvcreds"
options:
usepodidentity: "false"
tenantid: {{ .Values.tenantid }}
subscriptionid: {{ .Values.subsid }}
resourcegroup: {{ .Values.rg }}
keyvaultname: {{ .Values.kvname }}
keyvaultobjecttype: secret
keyvaultobjectname: {{ .Values.objectname }}
As can be seen, the error relates to the secret volume and its values.
I've triple checked there is no line-break or anything like that in the values.
I've run helm lint - no errors found.
I've run helm template - nothing strange or missing in output.
Update:
I've copied the output of helm template and put in a deploy.yaml file.
Then used kubectl apply -f deploy.yaml to manually deploy the service, and... it works.
That makes me think it's actually some kind of a bug in helm? make sense?
Update 2:
I've also tried replacing the azure/kv volume with emptyDir volume and I was able to deploy using helm. It looks like a specific issue of helm with azure/kv volume?
Any ideas for a workaround?
A completely correct answer requires that I say the actual details of your \r problem might be different from mine.
I found the issue in my case by looking in the kv log of the AKS node (/var/log/kv-driver.log). In my case, the error was:
Original Error: autorest/azure: Service returned an error. Status=403 Code="Forbidden" Message="Access denied. Caller was not found on any access policy.\r\n
You can learn to SSH into the node on this page:
https://learn.microsoft.com/en-us/azure/aks/ssh
If you want to follow the solution, I opened an issue:
https://github.com/Azure/kubernetes-keyvault-flexvol/issues/121