I'm trying to use MATLAB to write a text file in a folder other than "current folder" in UBUNTU. This folder is located in home directory so there would be no permission problem. I'm using the code that is shown below:
folder = '~/newFolder';
s1=fopen(folder,'newText.txt','w');
fprintf(s1,'hi')
fclose(s1);
But when I run the program, it shows invalid permission error. It would worth to mention that I've no problem when I try to write the text in the current folder. I also tried chmod 0777 -R ~/newFolder to modify the permission with no success.
What shall I do?
Thanks
If you take a look at to the fopen in Matlab documentation, you see that the second input argument in permission (that is related to the own function NOT your OS):
fileID = fopen(filename)
fileID = fopen(filename,permission)
But you are passing the filename as a second parameters.
you need to concatenate filepath and filename :
s1=fopen(strcat(folder, 'newText.txt'),'w');
Related
I've just created a script file in MATLAB, but can not run it. The name of my script is getEnvFiles.m. When I first tried to run it, I got the following result:
>> getEnvFiles
'getEnvFiles' is not found in the current folder or on the MATLAB path, but exists in:
\\wsl$\ubuntu\home\me
Change the MATLAB current folder or add its folder to the MATLAB path.
So, I added this directory (which is actually the current directory) to the search path, but still got the same result:
>> addpath('\\wsl$\ubuntu\home\me')
>> getEnvFiles
'getEnvFiles' is not found in the current folder or on the MATLAB path, but exists in:
\\wsl$\ubuntu\home\me
Change the MATLAB current folder or add its folder to the MATLAB path.
When I check the path, it looks like this directory is on the path:
>> path
MATLABPATH
\\wsl$\ubuntu\home\me
I can further verify that this directory is my present directory:
>> pwd
ans =
'\\wsl$\ubuntu\home\me'
and that getEnvFiles.m is in this directory:
>> ls
. .emacs.d HarborData
.. .emacs~ RawHarborData
.bash_history .landscape at
.bash_logout .motd_shown getEnvFiles.m
.bashrc .profile test.m
.bashrc~ .sudo_as_admin_successful
.emacs
Is the issue that I'm using wsl (Windows Subsystem for Linux), or do I have some other misunderstanding?
Type rehash and then try running your script again. Even though you have added the new directory to your path, you need to update the path cache so that it knows about the new scripts it can see.
The problem seems to lie in WSL's ability to add new files to the directory. When I create a new script within MATLAB, and try to run it, I get the problem discussed above. However, running already existing files is not a problem. For now, my only solution is to close MATLAB after creating a new script and reopen it. Then, I can run it. Although, oddly, I can't open it in MATLAB's editor.....
This may or may not help, but ...
Sometimes you have to prepend execution with .\ in order to run scripts in PowerShell or from within the command prompt (in Windows, I'm not sure about other operating systems).
I get this error quite often, especially when not in Admin mode.
Does this work?
% Get path of executing script.
filePath = matlab.desktop.editor.getActiveFilename; % Note that this isn't necessarily the same as the output of 'pwd()'.
% Or: filePath = mfilename('fullpath')
% Make sure all nested directories of filePath are on the path, then tell MATLAB where you're working.
addpath( genpath( filePath ) ); % If this fails, try one folder up the tree:
% addpath( genpath( fullfile( filePath, '.' ) );
cd( filePath );
Alternatively, it looks like you might have written and saved the script, and then typed it into the command window to execute. If it's not a special type of script (Function/Class/GUI/etc.) then you can simply click 'Run' in the Editor tab (or the F5 key) and MATLAB should prompt you with a 'Change Folder' option, to which you should acquiesce.
If you're running this script through the WSL terminal, try my suggested code.
I have a simple script in matlab and I want to load a file. It seems it only works if the file is in the same dir as the script. If I add the file to a directory it does not read it.
For example:
fileID = fopen('myfile','r' ,'n', 'US-ASCII');
but when I put myfile in files:
fileID = fopen('files/myfile','r' ,'n', 'US-ASCII');
or
fileID = fopen('./files/myfile','r' ,'n', 'US-ASCII');
I get a -1 as a fileID. File cannot be read.
As per the comments, this is happening because you most likely added the path of where the script was located to your MATLAB path but you did not add the subdirectory where the file was in to your path. This is why it can't find the file. Therefore to avoid this in the future, you need to physically change the directory (i.e. the Working Directory) of where MATLAB is currently operating to where your script is stored.
It is then where local referencing should work. You can do this by either using the cd function, going to the top of your MATLAB window where you see the directory listing, clicking on the arrow to the right and pulling a drop down menu to change the directory, typing the actual directory you want by clicking on any blank space in the directory listing to enable a text box:
... or if you are running the code in the MATLAB editor, it'll request that you change directories as the script you are trying to run is not currently located in the working directory.
You can also programmatically add the subfolders in your script directory using mfilename, fileparts, genpath and addpath:
[dir, ~, ~] = fileparts(mfilename('fullpath')); % locate your script directory
addpath(genpath(fullfile(dir))); % add the folder and all subfolders to Matlab search directory
% then load your file.
fileID = fopen('myfile','r' ,'n', 'US-ASCII')
If it is also important that all outputs should be placed within the same directory as your script file, you can cd to your script directory:
cd(dir)
I am new to image processing and what I am trying to do is resize an image and store it in tif format, but command window reports an error saying "you don't have the permission to write"
my code is imwrite(B,'myNewFile.tif');
and after running it shows
Error using imwrite (line 10)
Unable to open file "myNewFile.tif" for writing. You may not have write permission.
Do I have to create a file by the name 'myNewFile' before writing the above code?
As the error message states, you are trying to write the file myNewFile.tif to the current working directory. However, you do not have writing permission in the current working direcoty. This is an OS issue, not a Matlab one.
What you can do is change the current working directory (using cd command) and write the image to a different folder where you do have writing permissions.
Alternatively, you can supply a full path to the image file name, directing it to a folder where you have writing permissions.
imwrite( B, fullfile( '/path/to/where/you/can/write', 'myNewFile.tif' ) );
Here are links to the description of some Matlab commands that might help you:
pwd can be used to check what is your current working directory.
You can use cd to change the current working directory.
fullfile helps you construct file names and paths in a generic way without worrying about OS pecularities.
Setup:
Windows 7 Enterprise.
Matlab 7.10.0 (R2010a).
mcc compiler: Microsoft Visual C++ 2008 Express.
What's happening:
My project runs fine when running it through Matlab, but when trying to run the .exe through the command prompt after using mcc to compile, the command prompt generates an error.
The mcc command I issue is:
mcc -m -v STARTUP1.m -o EXE_REDUC
The error I receive in the command prompt is:
??? Error using ==> textscan
Invalid file identifier. Use fopen to generate a valid file identifier.
I have a file called LoadXLS.m that loads and reads a .csv file using:
fid = fopen(file,'r');
temp_data = textscan(fid,...args...);
And then I process temp_data.
The csv file I'm trying to load is called spec.csv. It is located two directories down from where I have STARTUP1.m stored. The location of STARTUP1.m is also the place that the mcc generated files are stored to. I have used the pathtool to "Add with subfolders" this location, but am aware that those locations are not transferred to mbuild when compiling.
What I've Tried:
I have gone in and added print statements to print the value of fid to make sure it is valid. When I run it in Matlab, it has a valid value, however when I run in the command prompt it always returns an invalid value of -1.
I have removed all addpath() calls, I have tried adding the STARTUP1.m directory to the mcc ctf archive using:
mcc -m -v -a 'C:\Users\...path...\STARTUP1.m_location' STARTUP1.m -o EXE_REDUC;
However when I do this, I get a different error when running in the command prompt:
Cannot open CTF archive file
'C:\...path...\AppData\Local\Temp\mathworks_tmp_7532_28296'
or
'C:\...path...\AppData\Local\Temp\mathworks_tmp_7532_28296.zip'
??? Undefined function or variable 'matlabrc'.
To fix this, I've tried adding the pragma
%#function matlabrc
to the top of STARTUP1.m to try and enforce its inclusion, but had no success.
I also copied the spec.csv file to a new directory in the ctfroot and changed
fid = fopen(...)
to:
[tempFile, message] = fopen(fullfile(ctfroot, 'Added Config Files', ad.spec_file));
The message is:
message is: No such file or directory
Objective:
Rearranging file locations is a sufficient workaround while the exectuable only runs on my computer, however the idea is to take this standalone and distribute it to multiple people on many different computers. I would like to be able to have a top folder with a startup file and within this folder, have as many subfolders as the package requires. The startup file should be able to access all subfolders and files within them as necessary.
I read something about the exectuable actually running from a "secret location" on the machine here: http://matlab.wikia.com/wiki/FAQ
I would just like to be able to group one entire folder tree with all its files into a package containing the executable and be able to run it anywhere.
More info:
When I put the spec.csv file in the same directory as STARUTP1.m, it finds it fine using mcc without the -a 'path' option and using the following in the LoadXLS.m file:
[tempFile, message] = fopen(ad.spec_file,'r');
This project contains GUIs, generates PDFs, generates plots, and also creates a zip directory.
Thank you in advance.
This is my code:
filename_date = strcat('Maayanei_yeshua-IC_',file_date,'.pdf')
filenamepdf = strcat(filename,'.pdf')
rename(['C:\Users\user\Desktop\' filenamepdf],['C:\Users\user\Desktop\' filename_date]);
And i get the error:
<??? Error using ==> movefile The system cannot find the path specified.>
or
<??? Undefined function or method 'rename' for input arguments of type 'char'.>
I checked hundreds of times and the file is there... i don't know why it can't find it, any help ?
Use the command
doc rename
to discover that rename is for working with ftp servers, which you are not doing here. What you want is the command movefile
Use the help window brought up by helpwin to look up all the commands you are using.
Also, from the command prompt try
dir(['C:\Users\user\Desktop\' filenamepdf])
to verify the file you want to move exists.