Unable to create SparkSession in DSE 6.7 - scala

I have upgraded DSE 5.1 to DSE 6.7.
We are using spark enabled analytics node for spark-jobs.
I am creating sparkSession object using:
SparkSession
.builder()
.appName("App Name")
.config("spark.cassandra.connection.host", "host")
.config("spark.cassandra.connection.port", "port")
.config("spark.cassandra.auth.username", "username")
.config("spark.cassandra.auth.password", "password"))
.enableHiveSupport()
.getOrCreate();
It was working fine in DSE 5.1 but throwing the following error in DSE 6.7
Exception: Error while instantiating 'org.apache.spark.sql.hive.HiveSessionStateBuilder':
java.lang.IllegalArgumentException: Error while instantiating 'org.apache.spark.sql.hive.HiveSessionStateBuilder':
at org.apache.spark.sql.SparkSession$.org$apache$spark$sql$SparkSession$$instantiateSessionState(SparkSession.scala:1062)
at org.apache.spark.sql.SparkSession$$anonfun$sessionState$2.apply(SparkSession.scala:137)
at org.apache.spark.sql.SparkSession$$anonfun$sessionState$2.apply(SparkSession.scala:136)
at scala.Option.getOrElse(Option.scala:121)
at org.apache.spark.sql.SparkSession.sessionState$lzycompute(SparkSession.scala:136)
at org.apache.spark.sql.SparkSession.sessionState(SparkSession.scala:133)
at org.apache.spark.sql.SparkSession.conf$lzycompute(SparkSession.scala:162)
at org.apache.spark.sql.SparkSession.conf(SparkSession.scala:162)
at org.apache.spark.sql.cassandra.package$CassandraSparkSessionFunctions$$anonfun$setCassandraConf$extension1$4.apply(package.scala:148)
at org.apache.spark.sql.cassandra.package$CassandraSparkSessionFunctions$$anonfun$setCassandraConf$extension1$4.apply(package.scala:148)
at scala.collection.TraversableLike$WithFilter$$anonfun$foreach$1.apply(TraversableLike.scala:733)
at scala.collection.immutable.Map$Map1.foreach(Map.scala:116)
at scala.collection.TraversableLike$WithFilter.foreach(TraversableLike.scala:732)
at org.apache.spark.sql.cassandra.package$CassandraSparkSessionFunctions$.setCassandraConf$extension1(package.scala:148)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:498)
at org.apache.spark.deploy.DseSparkSubmit$.org$apache$spark$deploy$DseSparkSubmit$$runMain(DseSparkSubmit.scala:737)
at org.apache.spark.deploy.DseSparkSubmit$.doRunMain$1(DseSparkSubmit.scala:171)
at org.apache.spark.deploy.DseSparkSubmit$.submit(DseSparkSubmit.scala:196)
at org.apache.spark.deploy.DseSparkSubmit$.main(DseSparkSubmit.scala:110)
at org.apache.spark.deploy.DseSparkSubmitBootstrapper$.main(DseSparkSubmitBootstrapper.scala:103)
at org.apache.spark.deploy.DseSparkSubmitBootstrapper.main(DseSparkSubmitBootstrapper.scala)
Caused by: org.apache.spark.sql.AnalysisException: java.lang.RuntimeException: java.lang.RuntimeException: Unable to instantiate org.apache.hadoop.hive.ql.metadata.SessionHiveMetaStoreClient;
at org.apache.spark.sql.hive.HiveExternalCatalog.withClient(HiveExternalCatalog.scala:106)
at org.apache.spark.sql.hive.HiveExternalCatalog.databaseExists(HiveExternalCatalog.scala:194)
at org.apache.spark.sql.internal.SharedState.externalCatalog$lzycompute(SharedState.scala:105)
at org.apache.spark.sql.internal.SharedState.externalCatalog(SharedState.scala:93)
at org.apache.spark.sql.hive.HiveSessionStateBuilder.externalCatalog(HiveSessionStateBuilder.scala:39)
at org.apache.spark.sql.hive.HiveSessionStateBuilder.catalog$lzycompute(HiveSessionStateBuilder.scala:54)
at org.apache.spark.sql.hive.HiveSessionStateBuilder.catalog(HiveSessionStateBuilder.scala:52)
at org.apache.spark.sql.hive.HiveSessionStateBuilder.catalog(HiveSessionStateBuilder.scala:35)
at org.apache.spark.sql.internal.BaseSessionStateBuilder.build(BaseSessionStateBuilder.scala:289)
at org.apache.spark.sql.SparkSession$.org$apache$spark$sql$SparkSession$$instantiateSessionState(SparkSession.scala:1059)
... 26 common frames omitted
Caused by: java.lang.RuntimeException: java.lang.RuntimeException: Unable to instantiate org.apache.hadoop.hive.ql.metadata.SessionHiveMetaStoreClient
at org.apache.hadoop.hive.ql.session.SessionState.start(SessionState.java:525)
at org.apache.spark.sql.hive.client.HiveClientImpl.<init>(HiveClientImpl.scala:191)
at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.lang.reflect.Constructor.newInstance(Constructor.java:423)
at org.apache.spark.sql.hive.client.IsolatedClientLoader.createClient(IsolatedClientLoader.scala:264)
at org.apache.spark.sql.hive.HiveUtils$.newClientForMetadata(HiveUtils.scala:362)
at org.apache.spark.sql.hive.HiveUtils$.newClientForMetadata(HiveUtils.scala:266)
at org.apache.spark.sql.hive.HiveExternalCatalog.client$lzycompute(HiveExternalCatalog.scala:66)
at org.apache.spark.sql.hive.HiveExternalCatalog.client(HiveExternalCatalog.scala:65)
at org.apache.spark.sql.hive.HiveExternalCatalog$$anonfun$databaseExists$1.apply$mcZ$sp(HiveExternalCatalog.scala:195)
at org.apache.spark.sql.hive.HiveExternalCatalog$$anonfun$databaseExists$1.apply(HiveExternalCatalog.scala:195)
at org.apache.spark.sql.hive.HiveExternalCatalog$$anonfun$databaseExists$1.apply(HiveExternalCatalog.scala:195)
at org.apache.spark.sql.hive.HiveExternalCatalog.withClient(HiveExternalCatalog.scala:97)
... 35 common frames omitted
Caused by: java.lang.RuntimeException: Unable to instantiate org.apache.hadoop.hive.ql.metadata.SessionHiveMetaStoreClient
at org.apache.hadoop.hive.metastore.MetaStoreUtils.newInstance(MetaStoreUtils.java:1523)
at org.apache.hadoop.hive.metastore.RetryingMetaStoreClient.<init>(RetryingMetaStoreClient.java:86)
at org.apache.hadoop.hive.metastore.RetryingMetaStoreClient.getProxy(RetryingMetaStoreClient.java:132)
at org.apache.hadoop.hive.metastore.RetryingMetaStoreClient.getProxy(RetryingMetaStoreClient.java:104)
at org.apache.hadoop.hive.ql.metadata.Hive.createMetaStoreClient(Hive.java:3005)
at org.apache.hadoop.hive.ql.metadata.Hive.getMSC(Hive.java:3024)
at org.apache.hadoop.hive.ql.session.SessionState.start(SessionState.java:503)
... 49 common frames omitted
Caused by: java.lang.reflect.InvocationTargetException: null
at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.lang.reflect.Constructor.newInstance(Constructor.java:423)
at org.apache.hadoop.hive.metastore.MetaStoreUtils.newInstance(MetaStoreUtils.java:1521)
... 55 common frames omitted
Caused by: java.lang.NoSuchMethodError: com.datastax.spark.connector.cql.CassandraConnectorConf.fromSparkConf(Lorg/apache/spark/SparkConf;)Lcom/datastax/spark/connector/cql/CassandraConnectorConf;
at com.datastax.bdp.hadoop.hive.metastore.SchemaManagerService.getCassandraConnector(SchemaManagerService.java:145)
at com.datastax.bdp.hadoop.hive.metastore.MetaStorePersister.<init>(MetaStorePersister.java:71)
at com.datastax.bdp.hadoop.hive.metastore.MetaStorePersister.getInstance(MetaStorePersister.java:59)
at com.datastax.bdp.hadoop.hive.metastore.CassandraHiveMetaStore.setConf(CassandraHiveMetaStore.java:70)
at org.apache.hadoop.util.ReflectionUtils.setConf(ReflectionUtils.java:76)
at org.apache.hadoop.util.ReflectionUtils.newInstance(ReflectionUtils.java:136)
at org.apache.hadoop.hive.metastore.RawStoreProxy.<init>(RawStoreProxy.java:57)
at org.apache.hadoop.hive.metastore.RawStoreProxy.getProxy(RawStoreProxy.java:66)
at org.apache.hadoop.hive.metastore.HiveMetaStore$HMSHandler.newRawStore(HiveMetaStore.java:593)
at org.apache.hadoop.hive.metastore.HiveMetaStore$HMSHandler.getMS(HiveMetaStore.java:571)
at org.apache.hadoop.hive.metastore.HiveMetaStore$HMSHandler.createDefaultDB(HiveMetaStore.java:620)
at org.apache.hadoop.hive.metastore.HiveMetaStore$HMSHandler.init(HiveMetaStore.java:461)
at org.apache.hadoop.hive.metastore.RetryingHMSHandler.<init>(RetryingHMSHandler.java:66)
at org.apache.hadoop.hive.metastore.RetryingHMSHandler.getProxy(RetryingHMSHandler.java:72)
at org.apache.hadoop.hive.metastore.HiveMetaStore.newRetryingHMSHandler(HiveMetaStore.java:5762)
at org.apache.hadoop.hive.metastore.HiveMetaStoreClient.<init>(HiveMetaStoreClient.java:199)
at org.apache.hadoop.hive.ql.metadata.SessionHiveMetaStoreClient.<init>(SessionHiveMetaStoreClient.java:74)
... 60 common frames omitted
Below is the dependencies I am using.
<dependencies>
<dependency>
<groupId>org.scala-lang</groupId>
<artifactId>scala-library</artifactId>
<version>2.11.0</version>
</dependency>
<dependency>
<groupId>org.apache.spark</groupId>
<artifactId>spark-core_2.11</artifactId>
<version>2.3.0</version>
</dependency>
<dependency>
<groupId>org.apache.spark</groupId>
<artifactId>spark-sql_2.11</artifactId>
<version>2.3.0</version>
</dependency>
<dependency>
<groupId>org.apache.spark</groupId>
<artifactId>spark-hive_2.11</artifactId>
<version>2.3.0</version>
</dependency>
<dependency>
<groupId>com.datastax.spark</groupId>
<artifactId>spark-cassandra-connector_2.11</artifactId>
<version>2.3.0</version>
</dependency>
<dependency>
<groupId>com.google.guava</groupId>
<artifactId>guava</artifactId>
<version>19.0</version>
</dependency>
<dependency>
<groupId>org.apache.logging.log4j</groupId>
<artifactId>log4j-api-scala_2.11</artifactId>
<version>11.0</version>
</dependency>
<dependency>
<groupId>org.json4s</groupId>
<artifactId>json4s-native_2.11</artifactId>
<version>3.6.1</version>
</dependency>
<dependency>
<groupId>org.json4s</groupId>
<artifactId>json4s-jackson_2.11</artifactId>
<version>3.6.1</version>
</dependency>
</dependencies>

DSE Analytics is based on Spark 2.2, not Spark 2.3.0 as connector that you are using. And for DSE I recommend to use DSE dependencies for specific version, like this:
<dependency>
<groupId>com.datastax.dse</groupId>
<artifactId>dse-spark-dependencies</artifactId>
<version>${dse.version}</version>
<scope>provided</scope>
</dependency>
The Spark build examples were already updated to 6.7.0 so you can grab dependencies from there: https://github.com/datastax/SparkBuildExamples/blob/master/scala/maven/dse/pom.xml

Related

There already exists an implementation for service org.kie.api.internal.assembler.KieAssemblers with same priority 0

I am trying to test a Hello World example of BPMN on Eclipse. I have followed the section "24.1. jBPM Eclipse Plugin" on https://docs.jbpm.org/7.67.0.Final/jbpm-docs/html_single where I select to use a simple "Hello World" process and to include a JUnit test class that will be used to test the process.
However, I am facing an error when I am running the ProcessTest.java as a JUnit Test.
Here is the full error :
java.lang.ExceptionInInitializerError
at org.drools.dynamic.DynamicServiceRegistrySupplier.get(DynamicServiceRegistrySupplier.java:32)
at org.drools.dynamic.DynamicServiceRegistrySupplier.get(DynamicServiceRegistrySupplier.java:23)
at org.kie.api.internal.utils.ServiceRegistry$Impl.getServiceRegistry(ServiceRegistry.java:90)
at org.kie.api.internal.utils.ServiceRegistry$ServiceRegistryHolder.<clinit>(ServiceRegistry.java:49)
at org.kie.api.internal.utils.ServiceRegistry.getInstance(ServiceRegistry.java:41)
at org.kie.api.internal.utils.ServiceRegistry.getService(ServiceRegistry.java:37)
at org.kie.internal.builder.KnowledgeBuilderFactory$FactoryServiceHolder.<clinit>(KnowledgeBuilderFactory.java:39)
at org.kie.internal.builder.KnowledgeBuilderFactory.newKnowledgeBuilder(KnowledgeBuilderFactory.java:52)
at org.jbpm.runtime.manager.impl.SimpleRuntimeEnvironment.<init>(SimpleRuntimeEnvironment.java:99)
at org.jbpm.runtime.manager.impl.SimpleRuntimeEnvironment.<init>(SimpleRuntimeEnvironment.java:93)
at org.jbpm.runtime.manager.impl.RuntimeEnvironmentBuilder.<init>(RuntimeEnvironmentBuilder.java:84)
at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at sun.reflect.NativeConstructorAccessorImpl.newInstance(Unknown Source)
at sun.reflect.DelegatingConstructorAccessorImpl.newInstance(Unknown Source)
at java.lang.reflect.Constructor.newInstance(Unknown Source)
at java.lang.Class.newInstance(Unknown Source)
at org.kie.api.runtime.manager.RuntimeEnvironmentBuilder$Factory.<clinit>(RuntimeEnvironmentBuilder.java:61)
at org.jbpm.test.JbpmJUnitBaseTestCase.createRuntimeManager(JbpmJUnitBaseTestCase.java:351)
at org.jbpm.test.JbpmJUnitBaseTestCase.createRuntimeManager(JbpmJUnitBaseTestCase.java:293)
at org.jbpm.test.JbpmJUnitBaseTestCase.createRuntimeManager(JbpmJUnitBaseTestCase.java:275)
at com.sample.ProcessTest.testProcess(ProcessTest.java:18)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(Unknown Source)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(Unknown Source)
at java.lang.reflect.Method.invoke(Unknown Source)
at org.junit.runners.model.FrameworkMethod$1.runReflectiveCall(FrameworkMethod.java:59)
at org.junit.internal.runners.model.ReflectiveCallable.run(ReflectiveCallable.java:12)
at org.junit.runners.model.FrameworkMethod.invokeExplosively(FrameworkMethod.java:56)
at org.junit.internal.runners.statements.InvokeMethod.evaluate(InvokeMethod.java:17)
at org.junit.internal.runners.statements.RunBefores.evaluate(RunBefores.java:26)
at org.junit.internal.runners.statements.RunAfters.evaluate(RunAfters.java:27)
at org.junit.runners.ParentRunner$3.evaluate(ParentRunner.java:306)
at org.junit.runners.BlockJUnit4ClassRunner$1.evaluate(BlockJUnit4ClassRunner.java:100)
at org.junit.runners.ParentRunner.runLeaf(ParentRunner.java:366)
at org.junit.runners.BlockJUnit4ClassRunner.runChild(BlockJUnit4ClassRunner.java:103)
at org.junit.runners.BlockJUnit4ClassRunner.runChild(BlockJUnit4ClassRunner.java:63)
at org.junit.runners.ParentRunner$4.run(ParentRunner.java:331)
at org.junit.runners.ParentRunner$1.schedule(ParentRunner.java:79)
at org.junit.runners.ParentRunner.runChildren(ParentRunner.java:329)
at org.junit.runners.ParentRunner.access$100(ParentRunner.java:66)
at org.junit.runners.ParentRunner$2.evaluate(ParentRunner.java:293)
at org.junit.internal.runners.statements.RunBefores.evaluate(RunBefores.java:26)
at org.junit.internal.runners.statements.RunAfters.evaluate(RunAfters.java:27)
at org.junit.runners.ParentRunner$3.evaluate(ParentRunner.java:306)
at org.junit.runners.ParentRunner.run(ParentRunner.java:413)
at org.eclipse.jdt.internal.junit4.runner.JUnit4TestReference.run(JUnit4TestReference.java:93)
at org.eclipse.jdt.internal.junit.runner.TestExecution.run(TestExecution.java:40)
at org.eclipse.jdt.internal.junit.runner.RemoteTestRunner.runTests(RemoteTestRunner.java:529)
at org.eclipse.jdt.internal.junit.runner.RemoteTestRunner.runTests(RemoteTestRunner.java:756)
at org.eclipse.jdt.internal.junit.runner.RemoteTestRunner.run(RemoteTestRunner.java:452)
at org.eclipse.jdt.internal.junit.runner.RemoteTestRunner.main(RemoteTestRunner.java:210)
Caused by: java.lang.RuntimeException: Unable to build kie service url = jar:file:/C:/Users/lucie/.m2/repository/org/kie/kie-internal/7.71.0.Final/kie-internal-7.71.0.Final.jar!/META-INF/kie/kie-internal/kie.conf
at org.kie.api.internal.utils.ServiceDiscoveryImpl.registerConfs(ServiceDiscoveryImpl.java:127)
at org.kie.api.internal.utils.ServiceDiscoveryImpl.lambda$getServices$1(ServiceDiscoveryImpl.java:105)
at java.util.Optional.ifPresent(Unknown Source)
at org.kie.api.internal.utils.ServiceDiscoveryImpl.getServices(ServiceDiscoveryImpl.java:103)
at org.kie.api.internal.utils.ServiceRegistry$Impl.<init>(ServiceRegistry.java:62)
at org.drools.dynamic.DynamicServiceRegistrySupplier$LazyHolder.<clinit>(DynamicServiceRegistrySupplier.java:27)
... 51 more
Caused by: java.lang.RuntimeException: There already exists an implementation for service org.kie.api.internal.assembler.KieAssemblers with same priority 0
at org.kie.api.internal.utils.ServiceDiscoveryImpl$PriorityMap.put(ServiceDiscoveryImpl.java:244)
at org.kie.api.internal.utils.ServiceDiscoveryImpl.processKieService(ServiceDiscoveryImpl.java:146)
at org.kie.api.internal.utils.ServiceDiscoveryImpl.registerConfs(ServiceDiscoveryImpl.java:123)
... 56 more
Here is my pom.xml :
<project xmlns="http://maven.apache.org/POM/4.0.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 https://maven.apache.org/xsd/maven-4.0.0.xsd">
<modelVersion>4.0.0</modelVersion>
<groupId>msc</groupId>
<artifactId>test</artifactId>
<version>0.0.1-SNAPSHOT</version>
<build>
<plugins>
<plugin>
<artifactId>maven-compiler-plugin</artifactId>
<version>3.5.1</version>
<configuration>
<source>1.8</source>
<target>1.8</target>
</configuration>
</plugin>
</plugins>
</build>
<dependencies>
<dependency>
<groupId>org.jbpm</groupId>
<artifactId>jbpm-test</artifactId>
<version>7.71.0.Final</version>
<scope>test</scope>
</dependency>
<dependency>
<groupId>org.jbpm</groupId>
<artifactId>jbpm-runtime-manager</artifactId>
<version>7.71.0.Final</version>
</dependency>
<dependency>
<groupId>org.kie</groupId>
<artifactId>kie-internal</artifactId>
<version>7.71.0.Final</version>
</dependency>
<dependency>
<groupId>junit</groupId>
<artifactId>junit</artifactId>
<version>4.13.2</version>
</dependency>
<dependency>
<groupId>org.hibernate</groupId>
<artifactId>hibernate-core</artifactId>
<version>5.3.27.Final</version>
</dependency>
</dependencies>
</project>
I have tried to clear the Maven cache but the error is still here. I don't know how I could try to resolve it, so I was wondering if anyone has an idea ? Thanks a lot for the help !
Here is the ProcessTest.java :
package com.sample;
import org.jbpm.test.JbpmJUnitBaseTestCase;
import org.junit.Test;
import org.kie.api.runtime.KieSession;
import org.kie.api.runtime.manager.RuntimeEngine;
import org.kie.api.runtime.manager.RuntimeManager;
import org.kie.api.runtime.process.ProcessInstance;
/**
* This is a sample file to test a process.
*/
public class ProcessTest extends JbpmJUnitBaseTestCase {
#SuppressWarnings("deprecation")
#Test
public void testProcess() {
RuntimeManager manager = createRuntimeManager("sample.bpmn");
RuntimeEngine engine = getRuntimeEngine(null);
KieSession ksession = engine.getKieSession();
ProcessInstance processInstance = ksession.startProcess("com.sample.bpmn.hello");
// check whether the process instance has completed successfully
assertProcessInstanceCompleted(processInstance.getId(), ksession);
assertNodeTriggered(processInstance.getId(), "Hello");
manager.disposeRuntimeEngine(engine);
manager.close();
}
}

Scala Spark Bigquery Connector issue - InternalException: grpc.StatusRuntimeException

I get the following error when I run Spark Scala code locally:
Exception in thread "main" com.google.cloud.spark.bigquery.repackaged.com.google.api.gax.rpc.InternalException: com.google.cloud.spark.bigquery.repackaged.io.grpc.StatusRuntimeException: INTERNAL: request failed: internal error
at com.google.cloud.spark.bigquery.repackaged.com.google.api.gax.rpc.ApiExceptionFactory.createException(ApiExceptionFactory.java:67)
at com.google.cloud.spark.bigquery.repackaged.com.google.api.gax.grpc.GrpcApiExceptionFactory.create(GrpcApiExceptionFactory.java:72)
at com.google.cloud.spark.bigquery.repackaged.com.google.api.gax.grpc.GrpcApiExceptionFactory.create(GrpcApiExceptionFactory.java:60)
at com.google.cloud.spark.bigquery.repackaged.com.google.api.gax.grpc.GrpcExceptionCallable$ExceptionTransformingFuture.onFailure(GrpcExceptionCallable.java:97)
at com.google.cloud.spark.bigquery.repackaged.com.google.api.core.ApiFutures$1.onFailure(ApiFutures.java:68)
at com.google.cloud.spark.bigquery.repackaged.com.google.common.util.concurrent.Futures$CallbackListener.run(Futures.java:1072)
at com.google.cloud.spark.bigquery.repackaged.com.google.common.util.concurrent.DirectExecutor.execute(DirectExecutor.java:30)
at com.google.cloud.spark.bigquery.repackaged.com.google.common.util.concurrent.AbstractFuture.executeListener(AbstractFuture.java:1164)
at com.google.cloud.spark.bigquery.repackaged.com.google.common.util.concurrent.AbstractFuture.complete(AbstractFuture.java:958)
at com.google.cloud.spark.bigquery.repackaged.com.google.common.util.concurrent.AbstractFuture.setException(AbstractFuture.java:749)
at com.google.cloud.spark.bigquery.repackaged.io.grpc.stub.ClientCalls$GrpcFuture.setException(ClientCalls.java:522)
at com.google.cloud.spark.bigquery.repackaged.io.grpc.stub.ClientCalls$UnaryStreamToFuture.onClose(ClientCalls.java:497)
at com.google.cloud.spark.bigquery.repackaged.io.grpc.internal.ClientCallImpl.closeObserver(ClientCallImpl.java:426)
at com.google.cloud.spark.bigquery.repackaged.io.grpc.internal.ClientCallImpl.access$500(ClientCallImpl.java:66)
at com.google.cloud.spark.bigquery.repackaged.io.grpc.internal.ClientCallImpl$ClientStreamListenerImpl.close(ClientCallImpl.java:689)
at com.google.cloud.spark.bigquery.repackaged.io.grpc.internal.ClientCallImpl$ClientStreamListenerImpl.access$900(ClientCallImpl.java:577)
at com.google.cloud.spark.bigquery.repackaged.io.grpc.internal.ClientCallImpl$ClientStreamListenerImpl$1StreamClosed.runInternal(ClientCallImpl.java:751)
at com.google.cloud.spark.bigquery.repackaged.io.grpc.internal.ClientCallImpl$ClientStreamListenerImpl$1StreamClosed.runInContext(ClientCallImpl.java:740)
at com.google.cloud.spark.bigquery.repackaged.io.grpc.internal.ContextRunnable.run(ContextRunnable.java:37)
at com.google.cloud.spark.bigquery.repackaged.io.grpc.internal.SerializingExecutor.run(SerializingExecutor.java:123)
at java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:511)
at java.util.concurrent.FutureTask.run(FutureTask.java:266)
at java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.access$201(ScheduledThreadPoolExecutor.java:180)
at java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:293)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624)
at java.lang.Thread.run(Thread.java:748)
Suppressed: com.google.cloud.spark.bigquery.repackaged.com.google.api.gax.rpc.AsyncTaskException: Asynchronous task failed
at com.google.cloud.spark.bigquery.repackaged.com.google.api.gax.rpc.ApiExceptions.callAndTranslateApiException(ApiExceptions.java:57)
at com.google.cloud.spark.bigquery.repackaged.com.google.api.gax.rpc.UnaryCallable.call(UnaryCallable.java:112)
at com.google.cloud.spark.bigquery.repackaged.com.google.cloud.bigquery.storage.v1beta1.BigQueryStorageClient.createReadSession(BigQueryStorageClient.java:237)
at com.google.cloud.spark.bigquery.direct.DirectBigQueryRelation.buildScan(DirectBigQueryRelation.scala:139)
at org.apache.spark.sql.execution.datasources.DataSourceStrategy.$anonfun$apply$2(DataSourceStrategy.scala:293)
at org.apache.spark.sql.execution.datasources.DataSourceStrategy.$anonfun$pruneFilterProject$1(DataSourceStrategy.scala:326)
at org.apache.spark.sql.execution.datasources.DataSourceStrategy.pruneFilterProjectRaw(DataSourceStrategy.scala:381)
at org.apache.spark.sql.execution.datasources.DataSourceStrategy.pruneFilterProject(DataSourceStrategy.scala:325)
at org.apache.spark.sql.execution.datasources.DataSourceStrategy.apply(DataSourceStrategy.scala:293)
at org.apache.spark.sql.catalyst.planning.QueryPlanner.$anonfun$plan$1(QueryPlanner.scala:63)
at scala.collection.Iterator$$anon$11.nextCur(Iterator.scala:480)
at scala.collection.Iterator$$anon$11.hasNext(Iterator.scala:486)
at scala.collection.Iterator$$anon$11.hasNext(Iterator.scala:485)
at org.apache.spark.sql.catalyst.planning.QueryPlanner.plan(QueryPlanner.scala:93)
at org.apache.spark.sql.catalyst.planning.QueryPlanner.$anonfun$plan$3(QueryPlanner.scala:78)
at scala.collection.TraversableOnce.$anonfun$foldLeft$1(TraversableOnce.scala:156)
at scala.collection.TraversableOnce.$anonfun$foldLeft$1$adapted(TraversableOnce.scala:156)
at scala.collection.Iterator.foreach(Iterator.scala:937)
at scala.collection.Iterator.foreach$(Iterator.scala:937)
at scala.collection.AbstractIterator.foreach(Iterator.scala:1425)
at scala.collection.TraversableOnce.foldLeft(TraversableOnce.scala:156)
at scala.collection.TraversableOnce.foldLeft$(TraversableOnce.scala:154)
at scala.collection.AbstractIterator.foldLeft(Iterator.scala:1425)
at org.apache.spark.sql.catalyst.planning.QueryPlanner.$anonfun$plan$2(QueryPlanner.scala:75)
at scala.collection.Iterator$$anon$11.nextCur(Iterator.scala:480)
at scala.collection.Iterator$$anon$11.hasNext(Iterator.scala:486)
at org.apache.spark.sql.catalyst.planning.QueryPlanner.plan(QueryPlanner.scala:93)
at org.apache.spark.sql.execution.QueryExecution.sparkPlan$lzycompute(QueryExecution.scala:72)
at org.apache.spark.sql.execution.QueryExecution.sparkPlan(QueryExecution.scala:68)
at org.apache.spark.sql.execution.QueryExecution.executedPlan$lzycompute(QueryExecution.scala:77)
at org.apache.spark.sql.execution.QueryExecution.executedPlan(QueryExecution.scala:77)
at org.apache.spark.sql.execution.CacheManager.$anonfun$cacheQuery$1(CacheManager.scala:100)
at org.apache.spark.sql.execution.CacheManager.writeLock(CacheManager.scala:67)
at org.apache.spark.sql.execution.CacheManager.cacheQuery(CacheManager.scala:91)
at org.apache.spark.sql.Dataset.persist(Dataset.scala:2963)
at org.apache.spark.sql.Dataset.cache(Dataset.scala:2973)
at Transform$.main(Transform.scala:22)
at Transform.main(Transform.scala)
Caused by: com.google.cloud.spark.bigquery.repackaged.io.grpc.StatusRuntimeException: INTERNAL: request failed: internal error
at com.google.cloud.spark.bigquery.repackaged.io.grpc.Status.asRuntimeException(Status.java:533)
... 16 more
below is my Maven dependency
<dependency>
<groupId>org.apache.spark</groupId>
<artifactId>spark-core_2.12</artifactId>
<version>2.4.0</version>
</dependency>
<dependency>
<groupId>org.apache.spark</groupId>
<artifactId>spark-sql_2.12</artifactId>
<version>2.4.0</version>
</dependency>
<!-- https://mvnrepository.com/artifact/com.google.cloud.spark/spark-bigquery -->
<dependency>
<groupId>com.google.cloud.spark</groupId>
<artifactId>spark-bigquery-with-dependencies_2.12</artifactId>
<version>0.14.0-beta</version>
</dependency>
I am running the sample Scala code from [here](
https://cloud.google.com/dataproc/docs/tutorials/bigquery-connector-spark-example).
Please update the table reference to bigquery-public-data.samples.shakespeare. It appears the old reference publicdata to BigQuery's public datasets is no longer valid.

Spring Boot fails loading AtomikosDataSourceBean

Spring Boot is not able to find an existing Atomikos dependency on startup:
2019-12-12 09:09:35.836[0;39m [31mERROR[0;39m [35m2796[0;39m [2m---[0;39m [2m[ main][0;39m [36mo.s.boot.SpringApplication [0;39m [2m:[0;39m Application run failed
org.springframework.beans.factory.UnsatisfiedDependencyException: Error creating bean with name 'taskDatasourceConfiguration': Unsatisfied dependency expressed through field 'dataSource'; nested exception is org.springframework.beans.factory.BeanCreationException: Error creating bean with name 'workFlowDataSource' defined in class path resource [cwp/services/adhoc_processor/config/NWFDatasourceConfiguration.class]: Bean instantiation via factory method failed; nested exception is org.springframework.beans.BeanInstantiationException: Failed to instantiate [javax.sql.DataSource]: Factory method 'workFlowDataSource' threw exception; nested exception is java.lang.NoClassDefFoundError: com/atomikos/jdbc/AtomikosDataSourceBean
at org.springframework.beans.factory.annotation.AutowiredAnnotationBeanPostProcessor$AutowiredFieldElement.inject(AutowiredAnnotationBeanPostProcessor.java:639) ~[spring-beans-5.2.0.RELEASE.jar:5.2.0.RELEASE]
at org.springframework.beans.factory.annotation.InjectionMetadata.inject(InjectionMetadata.java:116) ~[spring-beans-5.2.0.RELEASE.jar:5.2.0.RELEASE]
at org.springframework.beans.factory.annotation.AutowiredAnnotationBeanPostProcessor.postProcessProperties(AutowiredAnnotationBeanPostProcessor.java:397) ~[spring-beans-5.2.0.RELEASE.jar:5.2.0.RELEASE]
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.populateBean(AbstractAutowireCapableBeanFactory.java:1429) ~[spring-beans-5.2.0.RELEASE.jar:5.2.0.RELEASE]
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:594) ~[spring-beans-5.2.0.RELEASE.jar:5.2.0.RELEASE]
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:517) ~[spring-beans-5.2.0.RELEASE.jar:5.2.0.RELEASE]
at org.springframework.beans.factory.support.AbstractBeanFactory.lambda$doGetBean$0(AbstractBeanFactory.java:323) ~[spring-beans-5.2.0.RELEASE.jar:5.2.0.RELEASE]
at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:222) ~[spring-beans-5.2.0.RELEASE.jar:5.2.0.RELEASE]
at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:321) ~[spring-beans-5.2.0.RELEASE.jar:5.2.0.RELEASE]
at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:202) ~[spring-beans-5.2.0.RELEASE.jar:5.2.0.RELEASE]
at org.springframework.beans.factory.support.ConstructorResolver.instantiateUsingFactoryMethod(ConstructorResolver.java:400) ~[spring-beans-5.2.0.RELEASE.jar:5.2.0.RELEASE]
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.instantiateUsingFactoryMethod(AbstractAutowireCapableBeanFactory.java:1338) ~[spring-beans-5.2.0.RELEASE.jar:5.2.0.RELEASE]
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBeanInstance(AbstractAutowireCapableBeanFactory.java:1177) ~[spring-beans-5.2.0.RELEASE.jar:5.2.0.RELEASE]
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:557) ~[spring-beans-5.2.0.RELEASE.jar:5.2.0.RELEASE]
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:517) ~[spring-beans-5.2.0.RELEASE.jar:5.2.0.RELEASE]
at org.springframework.beans.factory.support.AbstractBeanFactory.lambda$doGetBean$0(AbstractBeanFactory.java:323) ~[spring-beans-5.2.0.RELEASE.jar:5.2.0.RELEASE]
at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:222) ~[spring-beans-5.2.0.RELEASE.jar:5.2.0.RELEASE]
at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:321) ~[spring-beans-5.2.0.RELEASE.jar:5.2.0.RELEASE]
at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:202) ~[spring-beans-5.2.0.RELEASE.jar:5.2.0.RELEASE]
at org.springframework.context.support.AbstractApplicationContext.getBean(AbstractApplicationContext.java:1108) ~[spring-context-5.2.0.RELEASE.jar:5.2.0.RELEASE]
at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:868) ~[spring-context-5.2.0.RELEASE.jar:5.2.0.RELEASE]
at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:550) ~[spring-context-5.2.0.RELEASE.jar:5.2.0.RELEASE]
at org.springframework.boot.web.reactive.context.ReactiveWebServerApplicationContext.refresh(ReactiveWebServerApplicationContext.java:66) ~[spring-boot-2.2.0.RELEASE.jar:2.2.0.RELEASE]
at org.springframework.boot.SpringApplication.refresh(SpringApplication.java:747) [spring-boot-2.2.0.RELEASE.jar:2.2.0.RELEASE]
at org.springframework.boot.SpringApplication.refreshContext(SpringApplication.java:397) [spring-boot-2.2.0.RELEASE.jar:2.2.0.RELEASE]
at org.springframework.boot.SpringApplication.run(SpringApplication.java:315) [spring-boot-2.2.0.RELEASE.jar:2.2.0.RELEASE]
at org.springframework.boot.SpringApplication.run(SpringApplication.java:1226) [spring-boot-2.2.0.RELEASE.jar:2.2.0.RELEASE]
at org.springframework.boot.SpringApplication.run(SpringApplication.java:1215) [spring-boot-2.2.0.RELEASE.jar:2.2.0.RELEASE]
at cwp.services.adhoc_processor.Application.main(Application.java:11) [classes/:na]
Caused by: org.springframework.beans.factory.BeanCreationException: Error creating bean with name 'workFlowDataSource' defined in class path resource [cwp/services/adhoc_processor/config/NWFDatasourceConfiguration.class]: Bean instantiation via factory method failed; nested exception is org.springframework.beans.BeanInstantiationException: Failed to instantiate [javax.sql.DataSource]: Factory method 'workFlowDataSource' threw exception; nested exception is java.lang.NoClassDefFoundError: com/atomikos/jdbc/AtomikosDataSourceBean
at org.springframework.beans.factory.support.ConstructorResolver.instantiate(ConstructorResolver.java:645) ~[spring-beans-5.2.0.RELEASE.jar:5.2.0.RELEASE]
at org.springframework.beans.factory.support.ConstructorResolver.instantiateUsingFactoryMethod(ConstructorResolver.java:475) ~[spring-beans-5.2.0.RELEASE.jar:5.2.0.RELEASE]
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.instantiateUsingFactoryMethod(AbstractAutowireCapableBeanFactory.java:1338) ~[spring-beans-5.2.0.RELEASE.jar:5.2.0.RELEASE]
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBeanInstance(AbstractAutowireCapableBeanFactory.java:1177) ~[spring-beans-5.2.0.RELEASE.jar:5.2.0.RELEASE]
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:557) ~[spring-beans-5.2.0.RELEASE.jar:5.2.0.RELEASE]
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:517) ~[spring-beans-5.2.0.RELEASE.jar:5.2.0.RELEASE]
at org.springframework.beans.factory.support.AbstractBeanFactory.lambda$doGetBean$0(AbstractBeanFactory.java:323) ~[spring-beans-5.2.0.RELEASE.jar:5.2.0.RELEASE]
at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:222) ~[spring-beans-5.2.0.RELEASE.jar:5.2.0.RELEASE]
at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:321) ~[spring-beans-5.2.0.RELEASE.jar:5.2.0.RELEASE]
at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:202) ~[spring-beans-5.2.0.RELEASE.jar:5.2.0.RELEASE]
at org.springframework.beans.factory.config.DependencyDescriptor.resolveCandidate(DependencyDescriptor.java:276) ~[spring-beans-5.2.0.RELEASE.jar:5.2.0.RELEASE]
at org.springframework.beans.factory.support.DefaultListableBeanFactory.doResolveDependency(DefaultListableBeanFactory.java:1287) ~[spring-beans-5.2.0.RELEASE.jar:5.2.0.RELEASE]
at org.springframework.beans.factory.support.DefaultListableBeanFactory.resolveDependency(DefaultListableBeanFactory.java:1207) ~[spring-beans-5.2.0.RELEASE.jar:5.2.0.RELEASE]
at org.springframework.beans.factory.annotation.AutowiredAnnotationBeanPostProcessor$AutowiredFieldElement.inject(AutowiredAnnotationBeanPostProcessor.java:636) ~[spring-beans-5.2.0.RELEASE.jar:5.2.0.RELEASE]
... 28 common frames omitted
Caused by: org.springframework.beans.BeanInstantiationException: Failed to instantiate [javax.sql.DataSource]: Factory method 'workFlowDataSource' threw exception; nested exception is java.lang.NoClassDefFoundError: com/atomikos/jdbc/AtomikosDataSourceBean
at org.springframework.beans.factory.support.SimpleInstantiationStrategy.instantiate(SimpleInstantiationStrategy.java:185) ~[spring-beans-5.2.0.RELEASE.jar:5.2.0.RELEASE]
at org.springframework.beans.factory.support.ConstructorResolver.instantiate(ConstructorResolver.java:640) ~[spring-beans-5.2.0.RELEASE.jar:5.2.0.RELEASE]
... 41 common frames omitted
Caused by: java.lang.NoClassDefFoundError: com/atomikos/jdbc/AtomikosDataSourceBean
at cwp.services.adhoc_processor.config.NWFDatasourceConfiguration.workFlowDataSource(NWFDatasourceConfiguration.java:22) ~[classes/:na]
at cwp.services.adhoc_processor.config.NWFDatasourceConfiguration$$EnhancerBySpringCGLIB$$be6ffde1.CGLIB$workFlowDataSource$0(<generated>) ~[classes/:na]
at cwp.services.adhoc_processor.config.NWFDatasourceConfiguration$$EnhancerBySpringCGLIB$$be6ffde1$$FastClassBySpringCGLIB$$2230db96.invoke(<generated>) ~[classes/:na]
at org.springframework.cglib.proxy.MethodProxy.invokeSuper(MethodProxy.java:244) ~[spring-core-5.2.0.RELEASE.jar:5.2.0.RELEASE]
at org.springframework.context.annotation.ConfigurationClassEnhancer$BeanMethodInterceptor.intercept(ConfigurationClassEnhancer.java:363) ~[spring-context-5.2.0.RELEASE.jar:5.2.0.RELEASE]
at cwp.services.adhoc_processor.config.NWFDatasourceConfiguration$$EnhancerBySpringCGLIB$$be6ffde1.workFlowDataSource(<generated>) ~[classes/:na]
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) ~[na:1.8.0_231]
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) ~[na:1.8.0_231]
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) ~[na:1.8.0_231]
at java.lang.reflect.Method.invoke(Method.java:498) ~[na:1.8.0_231]
at org.springframework.beans.factory.support.SimpleInstantiationStrategy.instantiate(SimpleInstantiationStrategy.java:154) ~[spring-beans-5.2.0.RELEASE.jar:5.2.0.RELEASE]
... 42 common frames omitted
Caused by: java.lang.ClassNotFoundException: com.atomikos.jdbc.AtomikosDataSourceBean
at java.net.URLClassLoader.findClass(URLClassLoader.java:382) ~[na:1.8.0_231]
at java.lang.ClassLoader.loadClass(ClassLoader.java:418) ~[na:1.8.0_231]
at sun.misc.Launcher$AppClassLoader.loadClass(Launcher.java:355) ~[na:1.8.0_231]
at java.lang.ClassLoader.loadClass(ClassLoader.java:351) ~[na:1.8.0_231]
... 53 common frames omitted
whereas it seems to properly exist on STS's classpath inside transactions-jdbc-4.0.6.jar pulled in as part of spring-boot-starter-jta-atomikos dependency present in pom.xml:
:
<project xmlns="http://maven.apache.org/POM/4.0.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/xsd/maven-4.0.0.xsd">
<modelVersion>4.0.0</modelVersion>
<parent>
<groupId>xxxxx</groupId>
<artifactId>parent</artifactId>
<version>1.1.9</version>
</parent>
<groupId>cwp.services</groupId>
<artifactId>xa-workflow-setup</artifactId>
<version>0.0.1-SNAPSHOT</version>
<name>Payment Ad-Hoc Processor</name>
<description>Payment Ad-Hoc Processor</description>
<properties>
<java.version>1.8</java.version>
<springboot.version>2.2.0.RELEASE</springboot.version>
<spring-cloud-version>Greenwich.SR3</spring-cloud-version>
<chaosmonkey.version>2.1.1</chaosmonkey.version>
</properties>
<dependencies>
<dependency>
<groupId>org.springframework.boot</groupId>
<artifactId>spring-boot-configuration-processor</artifactId>
<optional>true</optional>
</dependency>
<!-- common domain objects -->
<dependency>
<groupId>cwp.services</groupId>
<artifactId>payment-orchestration-model</artifactId>
<version>0.0.1-SNAPSHOT</version>
</dependency>
<dependency>
<groupId>org.springframework.boot</groupId>
<artifactId>spring-boot-starter-jta-atomikos</artifactId>
</dependency>
<dependency>
<groupId>sbx.services</groupId>
<artifactId>nxn-workflow-services</artifactId>
<version>2.0.0.Camunda-SNAPSHOT</version>
<exclusions>
<exclusion>
<groupId>sbx.services</groupId>
<artifactId>api-security</artifactId>
</exclusion>
<exclusion>
<groupId>org.springframework.boot</groupId>
<artifactId>
spring-boot-starter-jta-atomikos
</artifactId>
</exclusion>
</exclusions>
</dependency>
<dependency>
<groupId>sbx.services</groupId>
<artifactId>api-commons</artifactId>
<version>2.0.7-SNAPSHOT</version>
</dependency>
<dependency>
<groupId>org.apache.commons</groupId>
<artifactId>commons-lang3</artifactId>
</dependency>
<dependency>
<groupId>org.apache.kafka</groupId>
<artifactId>kafka-streams</artifactId>
</dependency>
<dependency>
<groupId>org.springframework.boot</groupId>
<artifactId>spring-boot-starter-actuator</artifactId>
</dependency>
<dependency>
<groupId>org.springframework.cloud</groupId>
<artifactId>spring-cloud-commons</artifactId>
</dependency>
<dependency>
<groupId>com.oracle.ojdbc</groupId>
<artifactId>ojdbc8</artifactId>
</dependency>
<dependency>
<groupId>org.kie</groupId>
<artifactId>kie-ci</artifactId>
<version>7.11.0.Final</version>
</dependency>
<dependency>
<groupId>org.drools</groupId>
<artifactId>drools-decisiontables</artifactId>
<version>7.11.0.Final</version>
</dependency>
<dependency>
<groupId>de.codecentric</groupId>
<artifactId>chaos-monkey-spring-boot</artifactId>
<version>${chaosmonkey.version}</version>
</dependency>
<dependency>
<groupId>org.springframework.kafka</groupId>
<artifactId>spring-kafka</artifactId>
</dependency>
<dependency>
<groupId>org.springframework.boot</groupId>
<artifactId>spring-boot-starter-data-jpa</artifactId>
</dependency>
<dependency>
<groupId>org.springframework.boot</groupId>
<artifactId>spring-boot-starter-test</artifactId>
</dependency>
<dependency>
<groupId>org.springframework.kafka</groupId>
<artifactId>spring-kafka-test</artifactId>
<scope>test</scope>
</dependency>
</dependencies>
<dependencyManagement>
<dependencies>
<dependency>
<groupId>org.springframework.cloud</groupId>
<artifactId>spring-cloud-dependencies</artifactId>
<version>${spring-cloud-version}</version>
<type>pom</type>
<scope>import</scope>
</dependency>
<dependency>
<groupId>org.springframework.boot</groupId>
<artifactId>spring-boot-dependencies</artifactId>
<version>${springboot.version}</version>
<type>pom</type>
<scope>import</scope>
</dependency>
</dependencies>
</dependencyManagement>
<build>
<finalName>${artifactId}-${version}</finalName>
<plugins>
<plugin>
<artifactId>maven-compiler-plugin</artifactId>
<version>3.1</version>
<configuration>
<source>${java.version}</source>
<target>${java.version}</target>
</configuration>
</plugin>
<plugin>
<groupId>org.springframework.boot</groupId>
<artifactId>spring-boot-maven-plugin</artifactId>
<executions>
<execution>
<goals>
<goal>repackage</goal>
</goals>
</execution>
</executions>
</plugin>
</plugins>
</build>
</project>
Here's also what Maven has in the local repo for both atomikos and spring-boot-starter-jta-atomikos:
I'm inheriting the project from someone else, so I'm unsure as to the reason why it's needed but there's also exists the following extra class sitting next to the Boot's Application.java. It doesn't seem to be called directly by anything in the application.
package cwp.services;
import javax.transaction.TransactionManager;
import javax.transaction.UserTransaction;
import org.hibernate.engine.transaction.jta.platform.internal.AbstractJtaPlatform;
public class AtomikosJtaPlatform extends AbstractJtaPlatform {
private static final long serialVersionUID = 1L;
static TransactionManager transactionManager;
static UserTransaction transaction;
#Override
protected TransactionManager locateTransactionManager() {
return transactionManager;
}
#Override
protected UserTransaction locateUserTransaction() {
return transaction;
}
public static void setTransactionManager(TransactionManager transactionManager) {
AtomikosJtaPlatform.transactionManager = transactionManager;
}
public static void setTransaction(UserTransaction transaction) {
AtomikosJtaPlatform.transaction = transaction;
}
}
Here's also some seemingly relevant excerpts from the log of how Spring Boot resolves its dependencies on startup prior to that error:
AtomikosJtaConfiguration:
Did not match:
- #ConditionalOnClass did not find required class 'com.atomikos.icatch.jta.UserTransactionManager' (OnClassCondition)
How does Spring Boot detects a JTA environment?
Any pointers on how to resolve this STS/Atomikos class loading issue are greatly appreciated.
Upon further examination, I discovered that the launch configuration for the project was misconfigured by pointing to another project which uses non-XA data source:
Pointing it to the current project seems to have fixed the issue.

Error when creating testTuple when writing unit test for apache storm bolt

I am trying to write unit test for one storm topology, I am using Testing.testTuple to create test tuple which I will pass to execute method. I am not able to get this created and getting following error:
java.lang.ExceptionInInitializerError
at org.apache.storm.config$read_storm_config.invoke(config.clj:78)
at org.apache.storm.config$fn__908.invoke(config.clj:100)
at org.apache.storm.config__init.load(Unknown Source)
at org.apache.storm.config__init.<clinit>(Unknown Source)
at java.lang.Class.forName0(Native Method)
at java.lang.Class.forName(Class.java:348)
at clojure.lang.RT.classForName(RT.java:2154)
at clojure.lang.RT.classForName(RT.java:2163)
at clojure.lang.RT.loadClassForName(RT.java:2182)
at clojure.lang.RT.load(RT.java:436)
at clojure.lang.RT.load(RT.java:412)
at clojure.core$load$fn__5448.invoke(core.clj:5866)
at clojure.core$load.doInvoke(core.clj:5865)
at clojure.lang.RestFn.invoke(RestFn.java:408)
at clojure.core$load_one.invoke(core.clj:5671)
at clojure.core$load_lib$fn__5397.invoke(core.clj:5711)
at clojure.core$load_lib.doInvoke(core.clj:5710)
at clojure.lang.RestFn.applyTo(RestFn.java:142)
at clojure.core$apply.invoke(core.clj:632)
at clojure.core$load_libs.doInvoke(core.clj:5753)
at clojure.lang.RestFn.applyTo(RestFn.java:137)
at clojure.core$apply.invoke(core.clj:634)
at clojure.core$use.doInvoke(core.clj:5843)
at clojure.lang.RestFn.invoke(RestFn.java:408)
at org.apache.storm.scheduler.DefaultScheduler$loading__5340__auto____8214.invoke(DefaultScheduler.clj:16)
at org.apache.storm.scheduler.DefaultScheduler__init.load(Unknown Source)
at org.apache.storm.scheduler.DefaultScheduler__init.<clinit>(Unknown Source)
at java.lang.Class.forName0(Native Method)
at java.lang.Class.forName(Class.java:348)
at clojure.lang.RT.classForName(RT.java:2154)
at clojure.lang.RT.classForName(RT.java:2163)
at clojure.lang.RT.loadClassForName(RT.java:2182)
at clojure.lang.RT.load(RT.java:436)
at clojure.lang.RT.load(RT.java:412)
at clojure.core$load$fn__5448.invoke(core.clj:5866)
at clojure.core$load.doInvoke(core.clj:5865)
at clojure.lang.RestFn.invoke(RestFn.java:408)
at clojure.core$load_one.invoke(core.clj:5671)
at clojure.core$load_lib$fn__5397.invoke(core.clj:5711)
at clojure.core$load_lib.doInvoke(core.clj:5710)
at clojure.lang.RestFn.applyTo(RestFn.java:142)
at clojure.core$apply.invoke(core.clj:632)
at clojure.core$load_libs.doInvoke(core.clj:5749)
at clojure.lang.RestFn.applyTo(RestFn.java:137)
at clojure.core$apply.invoke(core.clj:634)
at clojure.core$use.doInvoke(core.clj:5843)
at clojure.lang.RestFn.invoke(RestFn.java:408)
at org.apache.storm.daemon.nimbus$loading__5340__auto____8212.invoke(nimbus.clj:16)
at org.apache.storm.daemon.nimbus__init.load(Unknown Source)
at org.apache.storm.daemon.nimbus__init.<clinit>(Unknown Source)
at java.lang.Class.forName0(Native Method)
at java.lang.Class.forName(Class.java:348)
at clojure.lang.RT.classForName(RT.java:2154)
at clojure.lang.RT.classForName(RT.java:2163)
at clojure.lang.RT.loadClassForName(RT.java:2182)
at clojure.lang.RT.load(RT.java:436)
at clojure.lang.RT.load(RT.java:412)
at clojure.core$load$fn__5448.invoke(core.clj:5866)
at clojure.core$load.doInvoke(core.clj:5865)
at clojure.lang.RestFn.invoke(RestFn.java:408)
at clojure.core$load_one.invoke(core.clj:5671)
at clojure.core$load_lib$fn__5397.invoke(core.clj:5711)
at clojure.core$load_lib.doInvoke(core.clj:5710)
at clojure.lang.RestFn.applyTo(RestFn.java:142)
at clojure.core$apply.invoke(core.clj:632)
at clojure.core$load_libs.doInvoke(core.clj:5753)
at clojure.lang.RestFn.applyTo(RestFn.java:137)
at clojure.core$apply.invoke(core.clj:632)
at clojure.core$require.doInvoke(core.clj:5832)
at clojure.lang.RestFn.invoke(RestFn.java:408)
at org.apache.storm.testing$loading__5340__auto____8210.invoke(testing.clj:17)
at org.apache.storm.testing__init.load(Unknown Source)
at org.apache.storm.testing__init.<clinit>(Unknown Source)
at java.lang.Class.forName0(Native Method)
at java.lang.Class.forName(Class.java:348)
at clojure.lang.RT.classForName(RT.java:2154)
at clojure.lang.RT.classForName(RT.java:2163)
at clojure.lang.RT.loadClassForName(RT.java:2182)
at clojure.lang.RT.load(RT.java:436)
at clojure.lang.RT.load(RT.java:412)
at clojure.core$load$fn__5448.invoke(core.clj:5866)
at clojure.core$load.doInvoke(core.clj:5865)
at clojure.lang.RestFn.invoke(RestFn.java:408)
at clojure.core$load_one.invoke(core.clj:5671)
at clojure.core$load_lib$fn__5397.invoke(core.clj:5711)
at clojure.core$load_lib.doInvoke(core.clj:5710)
at clojure.lang.RestFn.applyTo(RestFn.java:142)
at clojure.core$apply.invoke(core.clj:632)
at clojure.core$load_libs.doInvoke(core.clj:5753)
at clojure.lang.RestFn.applyTo(RestFn.java:137)
at clojure.core$apply.invoke(core.clj:634)
at clojure.core$use.doInvoke(core.clj:5843)
at clojure.lang.RestFn.invoke(RestFn.java:408)
at org.apache.storm.LocalCluster$loading__5340__auto____8208.invoke(LocalCluster.clj:17)
at org.apache.storm.LocalCluster__init.load(Unknown Source)
at org.apache.storm.LocalCluster__init.<clinit>(Unknown Source)
at java.lang.Class.forName0(Native Method)
at java.lang.Class.forName(Class.java:348)
at clojure.lang.RT.classForName(RT.java:2154)
at clojure.lang.RT.classForName(RT.java:2163)
at clojure.lang.RT.loadClassForName(RT.java:2182)
at clojure.lang.RT.load(RT.java:436)
at clojure.lang.RT.load(RT.java:412)
at clojure.core$load$fn__5448.invoke(core.clj:5866)
at clojure.core$load.doInvoke(core.clj:5865)
at clojure.lang.RestFn.invoke(RestFn.java:408)
at clojure.core$load_one.invoke(core.clj:5671)
at clojure.core$load_lib$fn__5397.invoke(core.clj:5711)
at clojure.core$load_lib.doInvoke(core.clj:5710)
at clojure.lang.RestFn.applyTo(RestFn.java:142)
at clojure.core$apply.invoke(core.clj:632)
at clojure.core$load_libs.doInvoke(core.clj:5753)
at clojure.lang.RestFn.applyTo(RestFn.java:137)
at clojure.core$apply.invoke(core.clj:632)
at clojure.core$require.doInvoke(core.clj:5832)
at clojure.lang.RestFn.invoke(RestFn.java:408)
at org.apache.storm.testing4j$loading__5340__auto____11918.invoke(testing4j.clj:16)
at org.apache.storm.testing4j__init.load(Unknown Source)
at org.apache.storm.testing4j__init.<clinit>(Unknown Source)
at java.lang.Class.forName0(Native Method)
at java.lang.Class.forName(Class.java:348)
at clojure.lang.RT.classForName(RT.java:2154)
at clojure.lang.RT.classForName(RT.java:2163)
at clojure.lang.RT.loadClassForName(RT.java:2182)
at clojure.lang.RT.load(RT.java:436)
at clojure.lang.RT.load(RT.java:412)
at clojure.core$load$fn__5448.invoke(core.clj:5866)
at clojure.core$load.doInvoke(core.clj:5865)
at clojure.lang.RestFn.invoke(RestFn.java:408)
at clojure.lang.Var.invoke(Var.java:379)
at org.apache.storm.Testing.<clinit>(Unknown Source)
at com.abc.storm.bolts.IndexerBoltTest.add(IndexerBoltTest.scala:49)
Here is the piece of code throwing error:
val d = new IndexerBolt()
var cr: Option[MyObj] = None
import org.apache.storm.testing.MkTupleParam
val tupleParam = new MkTupleParam
tupleParam.setFields("value")
val t:Tuple = Testing.testTuple(util.Arrays.asList(cr.getJsonBytes), tupleParam) <== This line
d.execute(t, c => cr = Some(c))
I am not sure how to fix these error, I am trying to setup the tests for the first time. Here are my dependencies:
<dependency>
<groupId>org.apache.storm</groupId>
<artifactId>storm-core</artifactId>
<version>1.2.1</version>
<scope>provided test</scope> //earlier it was only provided, I also tested with just test as well, which yielded same result
<exclusions>
<exclusion>
<groupId>org.slf4j</groupId>
<artifactId>*</artifactId>
</exclusion>
<exclusion>
<groupId>log4j</groupId>
<artifactId>*</artifactId>
</exclusion>
<exclusion>
<groupId>org.apache.logging.log4j</groupId>
<artifactId>*</artifactId>
</exclusion>
<exclusion>
<groupId>ring-cors</groupId>
<artifactId>*</artifactId>
</exclusion>
<exclusion>
<groupId>javax</groupId>
<artifactId>*</artifactId>
</exclusion>
<exclusion>
<groupId>javax.servlet</groupId>
<artifactId>*</artifactId>
</exclusion>
</exclusions>
</dependency>
<dependency>
<groupId>org.mockito</groupId>
<artifactId>mockito-all</artifactId>
<version>1.9.5</version>
<scope>test</scope>
</dependency>
<dependency>
<groupId>junit</groupId>
<artifactId>junit</artifactId>
<version>4.12</version>
<scope>test</scope>
</dependency>
<dependency>
<groupId>org.junit.jupiter</groupId>
<artifactId>junit-jupiter-api</artifactId>
<version>5.2.0</version>
<scope>test</scope>
</dependency>
<dependency>
<groupId>org.junit.jupiter</groupId>
<artifactId>junit-jupiter-engine</artifactId>
<version>5.2.0</version>
<scope>test</scope>
</dependency>
I also tried following, as suggested here, but same error:
tupleParam.setStream("value")
tupleParam.setComponent("value")
tupleParam.setFields("value")
val t:Tuple = Testing.testTuple(new Values(cr.getJsonBytes), tupleParam)

class not found error - scala

i am running a scala program which is below. I am using maven for build and i have set the dependencies correctly and maven install was successful. But when am running the jar file i get java.lang.NoClassDefFoundError.
Program:
package RasterDataIngest.RasterDataIngestIntoHadoop
import geotrellis.spark._
import geotrellis.spark.ingest._
import geotrellis.spark.io.hadoop._
import geotrellis.spark.io.index._
import geotrellis.spark.tiling._
import geotrellis.spark.utils.SparkUtils
import geotrellis.vector._
import org.apache.hadoop.fs.Path
import org.apache.spark._
import com.quantifind.sumac.ArgMain
import com.quantifind.sumac.validation.Required
class HadoopIngestArgs extends IngestArgs {
#Required var catalog: String = _
def catalogPath = new Path(catalog)
}
object HadoopIngest extends ArgMain[HadoopIngestArgs] with Logging {
def main(args: HadoopIngestArgs): Unit = {
System.setProperty("com.sun.media.jai.disableMediaLib", "true")
implicit val sparkContext = SparkUtils.createSparkContext("Ingest")
val conf = sparkContext.hadoopConfiguration
conf.set("io.map.index.interval", "1")
val catalog = HadoopRasterCatalog(args.catalogPath)
val source = sparkContext.hadoopGeoTiffRDD(args.inPath)
val layoutScheme = ZoomedLayoutScheme()
Ingest[ProjectedExtent, SpatialKey](source, args.destCrs, layoutScheme, args.pyramid){ (rdd, level) =>
catalog
.writer[SpatialKey](RowMajorKeyIndexMethod, args.clobber)
.write(LayerId(args.layerName, level.zoom), rdd)
}
}
}
pom.xml:
<dependency>
<groupId>org.scala-lang</groupId>
<artifactId>scala-library</artifactId>
<version>${scala.version}</version>
</dependency>
<dependency>
<groupId>org.apache.spark</groupId>
<artifactId>spark-core_2.10</artifactId>
<version>1.5.2</version>
</dependency>
<dependency>
<groupId>com.azavea.geotrellis</groupId>
<artifactId>geotrellis-spark_2.10</artifactId> //this is the one
<version>0.10.0-M1</version>
</dependency>
<dependency>
<groupId>org.scalaz.stream</groupId>
<artifactId>scalaz-stream_2.10</artifactId>
<version>0.7.2a</version>
</dependency>
<dependency>
<groupId>org.apache.hadoop</groupId>
<artifactId>hadoop-core</artifactId>
<version>0.20.2</version>
</dependency>
<dependency>
<groupId>com.quantifind</groupId>
<artifactId>sumac_2.10</artifactId>
<version>0.3.0</version>
</dependency>
Error:
Exception in thread "main" java.lang.NoClassDefFoundError: geotrellis/spark/ingest/IngestArgs
at java.lang.ClassLoader.defineClass1(Native Method)
at java.lang.ClassLoader.defineClass(ClassLoader.java:800)
at java.security.SecureClassLoader.defineClass(SecureClassLoader.java:142)
at java.net.URLClassLoader.defineClass(URLClassLoader.java:449)
at java.net.URLClassLoader.access$100(URLClassLoader.java:71)
at java.net.URLClassLoader$1.run(URLClassLoader.java:361)
at java.net.URLClassLoader$1.run(URLClassLoader.java:355)
at java.security.AccessController.doPrivileged(Native Method)
at java.net.URLClassLoader.findClass(URLClassLoader.java:354)
at java.lang.ClassLoader.loadClass(ClassLoader.java:425)
at java.lang.ClassLoader.loadClass(ClassLoader.java:358)
at java.lang.Class.getDeclaredMethods0(Native Method)
at java.lang.Class.privateGetDeclaredMethods(Class.java:2625)
at java.lang.Class.getMethod0(Class.java:2866)
at java.lang.Class.getMethod(Class.java:1676)
at org.apache.spark.deploy.SparkSubmit$.org$apache$spark$deploy$SparkSubmit$$runMain(SparkSubmit.scala:670)
at org.apache.spark.deploy.SparkSubmit$.doRunMain$1(SparkSubmit.scala:180)
at org.apache.spark.deploy.SparkSubmit$.submit(SparkSubmit.scala:205)
at org.apache.spark.deploy.SparkSubmit$.main(SparkSubmit.scala:120)
at org.apache.spark.deploy.SparkSubmit.main(SparkSubmit.scala)
Caused by: java.lang.ClassNotFoundException: geotrellis.spark.ingest.IngestArgs
at java.net.URLClassLoader$1.run(URLClassLoader.java:366)
at java.net.URLClassLoader$1.run(URLClassLoader.java:355)
at java.security.AccessController.doPrivileged(Native Method)
at java.net.URLClassLoader.findClass(URLClassLoader.java:354)
at java.lang.ClassLoader.loadClass(ClassLoader.java:425)
at java.lang.ClassLoader.loadClass(ClassLoader.java:358)
please let me know where am going wrong..
Thanks beforehand!
It sounds like you are not building a jar which would actually contain your dependencies. If that is your problem, perhaps this answer would be helpful:
How can I create an executable JAR with dependencies using Maven?
I encountered a similar issue and adding this to my pom.xml fixed it for me:
<plugin>
<artifactId>maven-assembly-plugin</artifactId>
<configuration>
<descriptorRefs>
<descriptorRef>jar-with-dependencies</descriptorRef>
</descriptorRefs>
</configuration>
<executions>
<execution>
<id>make-assembly</id>
<phase>package</phase>
<goals>
<goal>single</goal>
</goals>
</execution>
</executions>
</plugin>
This plugin helps build a JAR that contains all dependencies. Source: https://www.cloudera.com/documentation/enterprise/5-5-x/topics/spark_building.html#building