in my app spark streaming I received this error, when the app read a file stream.
[error] Nonzero exit code: 1
[error] (Compile / run) Nonzero exit code: 1
[error] Total time: 48 s, completed Jan 18, 2019 2:04:07 PM
sbt:project1> 19/01/18 14:04:10 WARN Executor: Issue communicating with driver in heartbeater
org.apache.spark.SparkException: Exception thrown in awaitResult:
at org.apache.spark.util.ThreadUtils$.awaitResult(ThreadUtils.scala:226)
at org.apache.spark.rpc.RpcTimeout.awaitResult(RpcTimeout.scala:75)
at org.apache.spark.rpc.RpcEndpointRef.askSync(RpcEndpointRef.scala:92)
at org.apache.spark.executor.Executor.org$apache$spark$executor$Executor$$reportHeartBeat(Executor.scala:835)
at org.apache.spark.executor.Executor$$anon$2.$anonfun$run$24(Executor.scala:864)
at scala.runtime.java8.JFunction0$mcV$sp.apply(JFunction0$mcV$sp.java:12)
at org.apache.spark.util.Utils$.logUncaughtExceptions(Utils.scala:1945)
at org.apache.spark.executor.Executor$$anon$2.run(Executor.scala:864)
at java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:511)
at java.util.concurrent.FutureTask.runAndReset(FutureTask.java:308)
at java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.access$301(ScheduledThreadPoolExecutor.java:180)
at java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:294)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624)
at java.lang.Thread.run(Thread.java:748)
Caused by: org.apache.spark.SparkException: Could not find HeartbeatReceiver.
at org.apache.spark.rpc.netty.Dispatcher.postMessage(Dispatcher.scala:160)
at org.apache.spark.rpc.netty.Dispatcher.postLocalMessage(Dispatcher.scala:135)
at org.apache.spark.rpc.netty.NettyRpcEnv.ask(NettyRpcEnv.scala:229)
at org.apache.spark.rpc.netty.NettyRpcEndpointRef.ask(NettyRpcEnv.scala:523)
at org.apache.spark.rpc.RpcEndpointRef.askSync(RpcEndpointRef.scala:91)
... 12 more
I increase executor memory e network timeout
.set("spark.executor.memory", "5g")
.set("spark.network.timeout", "600s")
How can I solve this issue?
Thanks
Related
I am trying to replicate data from Kafka topic to apache ignite cluster. I have added ignite-core.jar along with all other required files in plugins and it's loaded in connector as per the logs. Still I'm facing this error. Any suggestions would be helpful. Thank you.
INFO Instantiated connector string-ignite-connector with version 6.1.1-ccs of type class org.apache.ignite.stream.kafka.connect.IgniteSinkConnector (org.apache.kafka.connect.runtime.Worker:284)
[2021-05-15 08:52:43,717] INFO Finished creating connector string-ignite-connector (org.apache.kafka.connect.runtime.Worker:310)
[2021-05-15 08:52:43,719] ERROR WorkerConnector{id=string-ignite-connector} Error while starting connector (org.apache.kafka.connect.runtime.WorkerConnector:193)
java.lang.NoClassDefFoundError: org/apache/ignite/internal/util/typedef/internal/A
at org.apache.ignite.stream.kafka.connect.IgniteSinkConnector.start(IgniteSinkConnector.java:55)
at org.apache.kafka.connect.runtime.WorkerConnector.doStart(WorkerConnector.java:185)
at org.apache.kafka.connect.runtime.WorkerConnector.start(WorkerConnector.java:210)
at org.apache.kafka.connect.runtime.WorkerConnector.doTransitionTo(WorkerConnector.java:349)
at org.apache.kafka.connect.runtime.WorkerConnector.doTransitionTo(WorkerConnector.java:332)
at org.apache.kafka.connect.runtime.WorkerConnector.doRun(WorkerConnector.java:140)
at org.apache.kafka.connect.runtime.WorkerConnector.run(WorkerConnector.java:117)
at java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:511)
at java.util.concurrent.FutureTask.run(FutureTask.java:266)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624)
at java.lang.Thread.run(Thread.java:748)
Caused by: java.lang.ClassNotFoundException: org.apache.ignite.internal.util.typedef.internal.A
at java.net.URLClassLoader.findClass(URLClassLoader.java:382)
at java.lang.ClassLoader.loadClass(ClassLoader.java:418)
at org.apache.kafka.connect.runtime.isolation.PluginClassLoader.loadClass(PluginClassLoader.java:104)
at java.lang.ClassLoader.loadClass(ClassLoader.java:351)
... 12 more
[2021-05-15 08:52:43,723] ERROR Failed to create job for myconfig/ignite-connector.properties (org.apache.kafka.connect.cli.ConnectStandalone:110)
[2021-05-15 08:52:43,723] ERROR Stopping after connector error (org.apache.kafka.connect.cli.ConnectStandalone:121)
java.util.concurrent.ExecutionException: org.apache.kafka.connect.errors.ConnectException: Failed to transition connector string-ignite-connector to state STARTED
at org.apache.kafka.connect.util.ConvertingFutureCallback.result(ConvertingFutureCallback.java:115)
at org.apache.kafka.connect.util.ConvertingFutureCallback.get(ConvertingFutureCallback.java:99)
at org.apache.kafka.connect.cli.ConnectStandalone.main(ConnectStandalone.java:118)
Caused by: org.apache.kafka.connect.errors.ConnectException: Failed to transition connector string-ignite-connector to state STARTED
at org.apache.kafka.connect.runtime.WorkerConnector.doTransitionTo(WorkerConnector.java:335)
at org.apache.kafka.connect.runtime.WorkerConnector.doRun(WorkerConnector.java:140)
at org.apache.kafka.connect.runtime.WorkerConnector.run(WorkerConnector.java:117)
at java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:511)
at java.util.concurrent.FutureTask.run(FutureTask.java:266)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624)
at java.lang.Thread.run(Thread.java:748)
Caused by: java.lang.NoClassDefFoundError: org/apache/ignite/internal/util/typedef/internal/A
at org.apache.ignite.stream.kafka.connect.IgniteSinkConnector.start(IgniteSinkConnector.java:55)
at org.apache.kafka.connect.runtime.WorkerConnector.doStart(WorkerConnector.java:185)
at org.apache.kafka.connect.runtime.WorkerConnector.start(WorkerConnector.java:210)
at org.apache.kafka.connect.runtime.WorkerConnector.doTransitionTo(WorkerConnector.java:349)
at org.apache.kafka.connect.runtime.WorkerConnector.doTransitionTo(WorkerConnector.java:332)
... 7 more
Caused by: java.lang.ClassNotFoundException: org.apache.ignite.internal.util.typedef.internal.A
at java.net.URLClassLoader.findClass(URLClassLoader.java:382)
at java.lang.ClassLoader.loadClass(ClassLoader.java:418)
at org.apache.kafka.connect.runtime.isolation.PluginClassLoader.loadClass(PluginClassLoader.java:104)
at java.lang.ClassLoader.loadClass(ClassLoader.java:351)
... 12 more
It looks like you have ignite-kafka module in your classpath, but not ignite-core and its dependencies, which is also needed. My understanding ends there.
I am executing a spark-scala job using spark-shell and the problem I am facing is, at the end of the final stage and final mapper like in stage 5 it allocates 50 and completed 49 very quickly and at the 50th it takes 5 minutes and says that out of memory and fails. I am using SPARK_MAJOR_VERSION=2
I am using the below command
spark-shell --master yarn --conf spark.driver.memory=30G --conf spark.executor.memory=40G --conf spark.shuffle.service.enabled=true --conf spark.dynamicAllocation.enabled=false --conf spark.sql.broadcastTimeout=36000 --conf spark.shuffle.compress=true --conf spark.executor.heartbeatInterval=3600s --conf spark.executor.instance=160
In the above configuration I have tried the dynamic allocation to true and started the driver and executor memory from 1GB. I have the overall ram of 6.78TB and 1300 VCores(This is my entire hadoop hardware).
The table I am reading is 40GB and I am joining 6 tables to that 40GB table, so, overall might be 60GB. so spark is initializing 4 stages for this and in the final stage at the end it is failing. I am using the spark sql to execute SQL.
Below are the errors:
19/04/26 14:29:02 WARN HeartbeatReceiver: Removing executor 2 with no recent heartbeats: 125967 ms exceeds timeout 120000 ms
19/04/26 14:29:02 ERROR YarnScheduler: Lost executor 2 on worker03.some.com: Executor heartbeat timed out after 125967 ms
19/04/26 14:29:02 WARN TaskSetManager: Lost task 5.0 in stage 2.0 (TID 119, worker03.some.com, executor 2): ExecutorLostFailure (executor 2 exited caused by one of the running tasks) Reason: Executor heartbeat timed out after 125967 ms
19/04/26 14:29:02 WARN HeartbeatReceiver: Removing executor 1 with no recent heartbeats: 126225 ms exceeds timeout 120000 ms
19/04/26 14:29:02 ERROR YarnScheduler: Lost executor 1 on ncednhpwrka0008.devhadoop.charter.com: Executor heartbeat timed out after 126225 ms
19/04/26 14:29:02 WARN YarnSchedulerBackend$YarnSchedulerEndpoint: Container marked as failed: container_e1223_1556277056929_0976_01_000003 on host: worker03.some.com. Exit status: 52. Diagnostics: Exception from container-launch.
Container id: container_e1223_1556277056929_0976_01_000003
Exit code: 52
Shell output: main : command provided 1
main : run as user is svc-bd-xdladmrw-dev
main : requested yarn user is svc-bd-xdladmrw-dev
Getting exit code file...
Creating script paths...
Writing pid file...
Writing to tmp file /data/00/yarn/local/nmPrivate/application_1556277056929_0976/container_e1223_1556277056929_0976_01_000003/container_e1223_1556277056929_0976_01_000003.pid.tmp
Writing to cgroup task files...
Creating local dirs...
Launching container...
Getting exit code file...
Creating script paths...
Container exited with a non-zero exit code 52. Last 4096 bytes of stderr :
0 in stage 2.0 (TID 119)
19/04/26 14:27:37 INFO HadoopRDD: Input split: hdfs://datadev/data/dev/HIVE_SCHEMA/somedb.db/sbscr_usge_cycl_key_xref/000000_0_copy_2:0+6623042
19/04/26 14:27:37 INFO OrcRawRecordMerger: min key = null, max key = null
19/04/26 14:27:37 INFO ReaderImpl: Reading ORC rows from hdfs://datadev/data/dev/HIVE_SCHEMA/somedb.db/sbscr_usge_cycl_key_xref/000000_0_copy_2 with {include: [true, true, true], offset: 0, length: 9223372036854775807}
19/04/26 14:29:00 ERROR Executor: Exception in task 5.0 in stage 2.0 (TID 119)
java.lang.OutOfMemoryError
at java.io.ByteArrayOutputStream.hugeCapacity(ByteArrayOutputStream.java:123)
at java.io.ByteArrayOutputStream.grow(ByteArrayOutputStream.java:117)
at java.io.ByteArrayOutputStream.ensureCapacity(ByteArrayOutputStream.java:93)
at java.io.ByteArrayOutputStream.write(ByteArrayOutputStream.java:153)
at net.jpountz.lz4.LZ4BlockOutputStream.flushBufferedData(LZ4BlockOutputStream.java:205)
at net.jpountz.lz4.LZ4BlockOutputStream.write(LZ4BlockOutputStream.java:158)
at java.io.DataOutputStream.write(DataOutputStream.java:107)
at org.apache.spark.sql.catalyst.expressions.UnsafeRow.writeToStream(UnsafeRow.java:554)
at org.apache.spark.sql.execution.SparkPlan$$anonfun$2.apply(SparkPlan.scala:237)
at org.apache.spark.sql.execution.SparkPlan$$anonfun$2.apply(SparkPlan.scala:228)
at org.apache.spark.rdd.RDD$$anonfun$mapPartitionsInternal$1$$anonfun$apply$25.apply(RDD.scala:827)
at org.apache.spark.rdd.RDD$$anonfun$mapPartitionsInternal$1$$anonfun$apply$25.apply(RDD.scala:827)
at org.apache.spark.rdd.MapPartitionsRDD.compute(MapPartitionsRDD.scala:38)
at org.apache.spark.rdd.RDD.computeOrReadCheckpoint(RDD.scala:323)
at org.apache.spark.rdd.RDD.iterator(RDD.scala:287)
at org.apache.spark.scheduler.ResultTask.runTask(ResultTask.scala:87)
at org.apache.spark.scheduler.Task.run(Task.scala:108)
at org.apache.spark.executor.Executor$TaskRunner.run(Executor.scala:338)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624)
at java.lang.Thread.run(Thread.java:748)
19/04/26 14:29:00 ERROR SparkUncaughtExceptionHandler: Uncaught exception in thread Thread[Executor task launch worker for task 119,5,main]
java.lang.OutOfMemoryError
at java.io.ByteArrayOutputStream.hugeCapacity(ByteArrayOutputStream.java:123)
at java.io.ByteArrayOutputStream.grow(ByteArrayOutputStream.java:117)
at java.io.ByteArrayOutputStream.ensureCapacity(ByteArrayOutputStream.java:93)
at java.io.ByteArrayOutputStream.write(ByteArrayOutputStream.java:153)
at net.jpountz.lz4.LZ4BlockOutputStream.flushBufferedData(LZ4BlockOutputStream.java:205)
at net.jpountz.lz4.LZ4BlockOutputStream.write(LZ4BlockOutputStream.java:158)
at java.io.DataOutputStream.write(DataOutputStream.java:107)
at org.apache.spark.sql.catalyst.expressions.UnsafeRow.writeToStream(UnsafeRow.java:554)
at org.apache.spark.sql.execution.SparkPlan$$anonfun$2.apply(SparkPlan.scala:237)
at org.apache.spark.sql.execution.SparkPlan$$anonfun$2.apply(SparkPlan.scala:228)
at org.apache.spark.rdd.RDD$$anonfun$mapPartitionsInternal$1$$anonfun$apply$25.apply(RDD.scala:827)
at org.apache.spark.rdd.RDD$$anonfun$mapPartitionsInternal$1$$anonfun$apply$25.apply(RDD.scala:827)
at org.apache.spark.rdd.MapPartitionsRDD.compute(MapPartitionsRDD.scala:38)
at org.apache.spark.rdd.RDD.computeOrReadCheckpoint(RDD.scala:323)
at org.apache.spark.rdd.RDD.iterator(RDD.scala:287)
at org.apache.spark.scheduler.ResultTask.runTask(ResultTask.scala:87)
at org.apache.spark.scheduler.Task.run(Task.scala:108)
at org.apache.spark.executor.Executor$TaskRunner.run(Executor.scala:338)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624)
at java.lang.Thread.run(Thread.java:748)
19/04/26 14:29:00 INFO DiskBlockManager: Shutdown hook called
19/04/26 14:29:00 INFO ShutdownHookManager: Shutdown hook called
19/04/26 14:29:02 ERROR YarnScheduler: Lost executor 2 on worker03.some.com: Container marked as failed: container_e1223_1556277056929_0976_01_000003 on host: worker03.some.com. Exit status: 52. Diagnostics: Exception from container-launch.
Container id: container_e1223_1556277056929_0976_01_000003
Exit code: 52
Shell output: main : command provided 1
main : run as user is svc-bd-xdladmrw-dev
main : requested yarn user is svc-bd-xdladmrw-dev
Getting exit code file...
Creating script paths...
Writing pid file...
Writing to tmp file /data/00/yarn/local/nmPrivate/application_1556277056929_0976/container_e1223_1556277056929_0976_01_000003/container_e1223_1556277056929_0976_01_000003.pid.tmp
Writing to cgroup task files...
Creating local dirs...
Launching container...
Getting exit code file...
Creating script paths...
Container exited with a non-zero exit code 52. Last 4096 bytes of stderr :
0 in stage 2.0 (TID 119)
19/04/26 14:27:37 INFO HadoopRDD: Input split: hdfs://datadev/data/dev/HIVE_SCHEMA/somedb.db/sbscr_usge_cycl_key_xref/000000_0_copy_2:0+6623042
19/04/26 14:27:37 INFO OrcRawRecordMerger: min key = null, max key = null
19/04/26 14:27:37 INFO ReaderImpl: Reading ORC rows from hdfs://datadev/data/dev/HIVE_SCHEMA/somedb.db/sbscr_usge_cycl_key_xref/000000_0_copy_2 with {include: [true, true, true], offset: 0, length: 9223372036854775807}
19/04/26 14:29:00 ERROR Executor: Exception in task 5.0 in stage 2.0 (TID 119)
java.lang.OutOfMemoryError
at java.io.ByteArrayOutputStream.hugeCapacity(ByteArrayOutputStream.java:123)
at java.io.ByteArrayOutputStream.grow(ByteArrayOutputStream.java:117)
at java.io.ByteArrayOutputStream.ensureCapacity(ByteArrayOutputStream.java:93)
at java.io.ByteArrayOutputStream.write(ByteArrayOutputStream.java:153)
at net.jpountz.lz4.LZ4BlockOutputStream.flushBufferedData(LZ4BlockOutputStream.java:205)
at net.jpountz.lz4.LZ4BlockOutputStream.write(LZ4BlockOutputStream.java:158)
at java.io.DataOutputStream.write(DataOutputStream.java:107)
at org.apache.spark.sql.catalyst.expressions.UnsafeRow.writeToStream(UnsafeRow.java:554)
at org.apache.spark.sql.execution.SparkPlan$$anonfun$2.apply(SparkPlan.scala:237)
at org.apache.spark.sql.execution.SparkPlan$$anonfun$2.apply(SparkPlan.scala:228)
at org.apache.spark.rdd.RDD$$anonfun$mapPartitionsInternal$1$$anonfun$apply$25.apply(RDD.scala:827)
at org.apache.spark.rdd.RDD$$anonfun$mapPartitionsInternal$1$$anonfun$apply$25.apply(RDD.scala:827)
at org.apache.spark.rdd.MapPartitionsRDD.compute(MapPartitionsRDD.scala:38)
at org.apache.spark.rdd.RDD.computeOrReadCheckpoint(RDD.scala:323)
at org.apache.spark.rdd.RDD.iterator(RDD.scala:287)
at org.apache.spark.scheduler.ResultTask.runTask(ResultTask.scala:87)
at org.apache.spark.scheduler.Task.run(Task.scala:108)
at org.apache.spark.executor.Executor$TaskRunner.run(Executor.scala:338)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624)
at java.lang.Thread.run(Thread.java:748)
19/04/26 14:29:00 ERROR SparkUncaughtExceptionHandler: Uncaught exception in thread Thread[Executor task launch worker for task 119,5,main]
java.lang.OutOfMemoryError
at java.io.ByteArrayOutputStream.hugeCapacity(ByteArrayOutputStream.java:123)
at java.io.ByteArrayOutputStream.grow(ByteArrayOutputStream.java:117)
at java.io.ByteArrayOutputStream.ensureCapacity(ByteArrayOutputStream.java:93)
at java.io.ByteArrayOutputStream.write(ByteArrayOutputStream.java:153)
at net.jpountz.lz4.LZ4BlockOutputStream.flushBufferedData(LZ4BlockOutputStream.java:205)
at net.jpountz.lz4.LZ4BlockOutputStream.write(LZ4BlockOutputStream.java:158)
at java.io.DataOutputStream.write(DataOutputStream.java:107)
at org.apache.spark.sql.catalyst.expressions.UnsafeRow.writeToStream(UnsafeRow.java:554)
at org.apache.spark.sql.execution.SparkPlan$$anonfun$2.apply(SparkPlan.scala:237)
at org.apache.spark.sql.execution.SparkPlan$$anonfun$2.apply(SparkPlan.scala:228)
at org.apache.spark.rdd.RDD$$anonfun$mapPartitionsInternal$1$$anonfun$apply$25.apply(RDD.scala:827)
at org.apache.spark.rdd.RDD$$anonfun$mapPartitionsInternal$1$$anonfun$apply$25.apply(RDD.scala:827)
at org.apache.spark.rdd.MapPartitionsRDD.compute(MapPartitionsRDD.scala:38)
at org.apache.spark.rdd.RDD.computeOrReadCheckpoint(RDD.scala:323)
at org.apache.spark.rdd.RDD.iterator(RDD.scala:287)
at org.apache.spark.scheduler.ResultTask.runTask(ResultTask.scala:87)
at org.apache.spark.scheduler.Task.run(Task.scala:108)
at org.apache.spark.executor.Executor$TaskRunner.run(Executor.scala:338)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624)
at java.lang.Thread.run(Thread.java:748)
19/04/26 14:29:00 INFO DiskBlockManager: Shutdown hook called
19/04/26 14:29:00 INFO ShutdownHookManager: Shutdown hook called
Can anyone let me know if I am doing anything wrong here, like the memory allocation or something?, please suggest any alternatives to complete this job without getting the our of memory exception or worker node lost error. Any help or info is greatly appreciated.
Thanks!
at the end of the final stage and final mapper like in stage 5 it allocates 50 and completed 49 very quickly and at the 50th it takes 5 minutes and says that out of memory and fails.
The table I am reading is 40GB and I am joining 6 tables to that 40GB table
It sounds like a skewed data to me, most of the keys used for joining are in one partition. So instead spreading the work among multiple executors, Spark uses just one and overloads it. It affects both memory consumption and performance.
There are a few ways to deal with it:
Skewed dataset join in Spark?
How to repartition a dataframe in Spark scala on a skewed column?
I'm using kafka v.0.10.2 on my cluster.
I can produce message fine using v.0.8.x and v0.10.2
BUT when consuming messages using client v0.10.0.x I'm having errors below;
WARN [ConsumerFetcherThread-console-consumer-myconsumer-0-1002], Error in fetch kafka.consumer.ConsumerFetcherThread$FetchRequest#16090d7a. Possible cause: java.nio.BufferUnderflowException (kafka.consumer.ConsumerFetcherThread)
ok,now my kafka.clien is v.0.8.x
but ihave a new problem
6 15:07:13 WARN scheduler.TaskSetManager: Lost task 0.0 in stage 0.0 (TID 0, hadoop11, executor 10): org.apache.spark.SparkException: Task failed while writing rows
at org.apache.spark.internal.io.SparkHadoopWriter$.org$apache$spark$internal$io$SparkHadoopWriter$$executeTask(SparkHadoopWriter.scala:151)
at org.apache.spark.internal.io.SparkHadoopWriter$$anonfun$3.apply(SparkHadoopWriter.scala:79)
at org.apache.spark.internal.io.SparkHadoopWriter$$anonfun$3.apply(SparkHadoopWriter.scala:78)
at org.apache.spark.scheduler.ResultTask.runTask(ResultTask.scala:87)
at org.apache.spark.scheduler.Task.run(Task.scala:109)
at org.apache.spark.executor.Executor$TaskRunner.run(Executor.scala:345)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624)
at java.lang.Thread.run(Thread.java:748)
Caused by: kafka.common.KafkaException: String exceeds the maximum size of 32767.
at kafka.api.ApiUtils$.shortStringLength(ApiUtils.scala:73)
at kafka.api.TopicData$.headerSize(FetchResponse.scala:107)
at kafka.api.TopicData.<init>(FetchResponse.scala:113)
at kafka.api.TopicData$.readFrom(FetchResponse.scala:103)
at kafka.api.FetchResponse$$anonfun$4.apply(FetchResponse.scala:170)
at kafka.api.FetchResponse$$anonfun$4.apply(FetchResponse.scala:169)
at scala.collection.TraversableLike$$anonfun$flatMap$1.apply(TraversableLike.scala:241)
at scala.collection.TraversableLike$$anonfun$flatMap$1.apply(TraversableLike.scala:241)
at scala.collection.immutable.Range.foreach(Range.scala:160)
at scala.collection.TraversableLike$class.flatMap(TraversableLike.scala:241)
at scala.collection.AbstractTraversable.flatMap(Traversable.scala:104)
at kafka.api.FetchResponse$.readFrom(FetchResponse.scala:169)
at kafka.consumer.SimpleConsumer.fetch(SimpleConsumer.scala:135)
at org.apache.spark.streaming.kafka.KafkaRDD$KafkaRDDIterator.fetchBatch(KafkaRDD.scala:196)
at org.apache.spark.streaming.kafka.KafkaRDD$KafkaRDDIterator.getNext(KafkaRDD.scala:212)
at org.apache.spark.util.NextIterator.hasNext(NextIterator.scala:73)
at scala.collection.Iterator$GroupedIterator.fill(Iterator.scala:1126)
at scala.collection.Iterator$GroupedIterator.hasNext(Iterator.scala:1132)
at scala.collection.Iterator$$anon$11.hasNext(Iterator.scala:408)
at scala.collection.Iterator$$anon$11.hasNext(Iterator.scala:408)
at org.apache.spark.internal.io.SparkHadoopWriter$$anonfun$4.apply(SparkHadoopWriter.scala:124)
at org.apache.spark.internal.io.SparkHadoopWriter$$anonfun$4.apply(SparkHadoopWriter.scala:123)
at org.apache.spark.util.Utils$.tryWithSafeFinallyAndFailureCallbacks(Utils.scala:1411)
at org.apache.spark.internal.io.SparkHadoopWriter$.org$apache$spark$internal$io$SparkHadoopWriter$$executeTask(SparkHadoopWriter.scala:135)
... 8 more
what show i do
String exceeds the maximum size of 32767.
Tell me about my final plan
I upgraded the version to 0.10.2
when I run Scala application on Spark cluster in yarn mode(spark version 2.2.0),the application is using the pregel model, each vertex in the data graph sends message. the Exception information as follows:
Exception in thread "main" org.apache.spark.SparkException:
Job aborted due to stage failure: Task 29 in stage 25.0 failed 4 times,
most recent failure: Lost task 29.3 in stage 25.0 (TID 1632, 192.168.1.5, executor 1): java.io.IOException: org.apache.spark.SparkException:
Failed to get broadcast_22_piece0 of broadcast_22
at org.apache.spark.util.Utils$.tryOrIOException(Utils.scala:1310)
at org.apache.spark.broadcast.TorrentBroadcast.readBroadcastBlock(TorrentBroadcast.scala:206)
at org.apache.spark.broadcast.TorrentBroadcast._value$lzycompute(TorrentBroadcast.scala:66)
at org.apache.spark.broadcast.TorrentBroadcast._value(TorrentBroadcast.scala:66)
at org.apache.spark.broadcast.TorrentBroadcast.getValue(TorrentBroadcast.scala:96)
at org.apache.spark.broadcast.Broadcast.value(Broadcast.scala:70)
at org.apache.spark.scheduler.ShuffleMapTask.runTask(ShuffleMapTask.scala:86)
at org.apache.spark.scheduler.ShuffleMapTask.runTask(ShuffleMapTask.scala:53)
at org.apache.spark.scheduler.Task.run(Task.scala:108)
at org.apache.spark.executor.Executor$TaskRunner.run(Executor.scala:335)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624)
at java.lang.Thread.run(Thread.java:748)
Caused by: org.apache.spark.SparkException: Failed to get broadcast_22_piece0 of broadcast_22
at org.apache.spark.broadcast.TorrentBroadcast$$anonfun$org$apache$spark$broadcast$TorrentBroadcast$$readBlocks$1.apply$mcVI$sp(TorrentBroadcast.scala:178)
at org.apache.spark.broadcast.TorrentBroadcast$$anonfun$org$apache$spark$broadcast$TorrentBroadcast$$readBlocks$1.apply(TorrentBroadcast.scala:150)
at org.apache.spark.broadcast.TorrentBroadcast$$anonfun$org$apache$spark$broadcast$TorrentBroadcast$$readBlocks$1.apply(TorrentBroadcast.scala:150)
at scala.collection.immutable.List.foreach(List.scala:381)
at org.apache.spark.broadcast.TorrentBroadcast.org$apache$spark$broadcast$TorrentBroadcast$$readBlocks(TorrentBroadcast.scala:150)
at org.apache.spark.broadcast.TorrentBroadcast$$anonfun$readBroadcastBlock$1.apply(TorrentBroadcast.scala:222)
at org.apache.spark.util.Utils$.tryOrIOException(Utils.scala:1303)
... 12 more
I have searched the exception online, and one of the suggestions is adding statement .set("spark.cleaner.ttl","2000")
but it still does not work well.
Can you help me? thanks a lot.
some sinnpets that may cause the above exception as follows:
val spark = SparkSession.builder.master("spark://node01.:7077").appName("ioce").getOrCreate()
.......
and in the program, joining dataframe is used(which I looked through online warns that may be also relevant to the exception).
I have a problem when I fit my model, the df_train DataFrame already have the features vectors and the label vector, but I get this error, and I don't have any idea of what is going on. I tried everything but still I don't know what happens. Maybe it is a problem of memory with Spark or something else.
I try something else, I run the same script in a cluster of Hadoop and works fine, but when I run it in my local machine appears that error
val gbt = new GBTClassifier().setFeaturesCol("features").setLabelCol("label").setMaxIter(50)
val model = gbt.fit(df_train)
java.io.FileNotFoundException: C:\Users\USER\AppData\Local\Temp\blockmgr-634044d0-c0c8-43c2-b383-aa4c4a1f4f32\36\temp_shuffle_54d1a4b0-8738-4f54-becf-39d8c0d7a129 (El sistema no puede encontrar la ruta especificada)
at java.io.FileOutputStream.open0(Native Method)
at java.io.FileOutputStream.open(FileOutputStream.java:270)
at java.io.FileOutputStream.<init>(FileOutputStream.java:213)
at org.apache.spark.storage.DiskBlockObjectWriter$$anonfun$revertPartialWritesAndClose$2.apply$mcV$sp(DiskBlockObjectWriter.scala:217)
at org.apache.spark.util.Utils$.tryWithSafeFinally(Utils.scala:1386)
at org.apache.spark.storage.DiskBlockObjectWriter.revertPartialWritesAndClose(DiskBlockObjectWriter.scala:214)
at org.apache.spark.shuffle.sort.BypassMergeSortShuffleWriter.stop(BypassMergeSortShuffleWriter.java:237)
at org.apache.spark.scheduler.ShuffleMapTask.runTask(ShuffleMapTask.scala:102)
at org.apache.spark.scheduler.ShuffleMapTask.runTask(ShuffleMapTask.scala:53)
at org.apache.spark.scheduler.Task.run(Task.scala:109)
at org.apache.spark.executor.Executor$TaskRunner.run(Executor.scala:345)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624)
at java.lang.Thread.run(Thread.java:748)
18/03/21 14:27:52 ERROR BypassMergeSortShuffleWriter: Error while deleting file C:\Users\USER\AppData\Local\Temp\blockmgr-634044d0-c0c8-43c2-b383-aa4c4a1f4f32\36\temp_shuffle_54d1a4b0-8738-4f54-becf-39d8c0d7a129
18/03/21 14:27:52 ERROR Executor: Exception in task 0.0 in stage 710.0 (TID 706)
java.io.FileNotFoundException: C:\Users\USER\AppData\Local\Temp\blockmgr-634044d0-c0c8-43c2-b383-aa4c4a1f4f32\36\temp_shuffle_54d1a4b0-8738-4f54-becf-39d8c0d7a129 (El sistema no puede encontrar la ruta especificada)
at java.io.FileOutputStream.open0(Native Method)
at java.io.FileOutputStream.open(FileOutputStream.java:270)
at java.io.FileOutputStream.<init>(FileOutputStream.java:213)
at org.apache.spark.storage.DiskBlockObjectWriter.initialize(DiskBlockObjectWriter.scala:103)
at org.apache.spark.storage.DiskBlockObjectWriter.open(DiskBlockObjectWriter.scala:116)
at org.apache.spark.storage.DiskBlockObjectWriter.write(DiskBlockObjectWriter.scala:237)
at org.apache.spark.shuffle.sort.BypassMergeSortShuffleWriter.write(BypassMergeSortShuffleWriter.java:151)
at org.apache.spark.scheduler.ShuffleMapTask.runTask(ShuffleMapTask.scala:96)
at org.apache.spark.scheduler.ShuffleMapTask.runTask(ShuffleMapTask.scala:53)
at org.apache.spark.scheduler.Task.run(Task.scala:109)
at org.apache.spark.executor.Executor$TaskRunner.run(Executor.scala:345)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624)
at java.lang.Thread.run(Thread.java:748)
18/03/21 14:27:52 WARN TaskSetManager: Lost task 0.0 in stage 710.0 (TID 706, localhost, executor driver): java.io.FileNotFoundException: C:\Users\USER\AppData\Local\Temp\blockmgr-634044d0-c0c8-43c2-b383-aa4c4a1f4f32\36\temp_shuffle_54d1a4b0-8738-4f54-becf-39d8c0d7a129 (El sistema no puede encontrar la ruta especificada)
at java.io.FileOutputStream.open0(Native Method)
at java.io.FileOutputStream.open(FileOutputStream.java:270)
at java.io.FileOutputStream.<init>(FileOutputStream.java:213)
at org.apache.spark.storage.DiskBlockObjectWriter.initialize(DiskBlockObjectWriter.scala:103)
at org.apache.spark.storage.DiskBlockObjectWriter.open(DiskBlockObjectWriter.scala:116)
at org.apache.spark.storage.DiskBlockObjectWriter.write(DiskBlockObjectWriter.scala:237)
at org.apache.spark.shuffle.sort.BypassMergeSortShuffleWriter.write(BypassMergeSortShuffleWriter.java:151)
at org.apache.spark.scheduler.ShuffleMapTask.runTask(ShuffleMapTask.scala:96)
at org.apache.spark.scheduler.ShuffleMapTask.runTask(ShuffleMapTask.scala:53)
at org.apache.spark.scheduler.Task.run(Task.scala:109)
at org.apache.spark.executor.Executor$TaskRunner.run(Executor.scala:345)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624)
at java.lang.Thread.run(Thread.java:748)
18/03/21 14:27:52 ERROR TaskSetManager: Task 0 in stage 710.0 failed 1 times; aborting job
18/03/21 14:27:52 INFO TaskSchedulerImpl: Removed TaskSet 710.0, whose tasks have all completed, from pool
18/03/21 14:27:52 INFO TaskSchedulerImpl: Cancelling stage 710
18/03/21 14:27:52 INFO DAGScheduler: ShuffleMapStage 710 (flatMap at RandomForest.scala:921) failed in 0,044 s due to Job aborted due to stage failure: Task 0 in stage 710.0 failed 1 times, most recent failure: Lost task 0.0 in stage 710.0 (TID 706, localhost, executor driver): java.io.FileNotFoundException: C:\Users\USER\AppData\Local\Temp\blockmgr-634044d0-c0c8-43c2-b383-aa4c4a1f4f32\36\temp_shuffle_54d1a4b0-8738-4f54-becf-39d8c0d7a129 (El sistema no puede encontrar la ruta especificada)
at java.io.FileOutputStream.open0(Native Method)
at java.io.FileOutputStream.open(FileOutputStream.java:270)
at java.io.FileOutputStream.<init>(FileOutputStream.java:213)
at org.apache.spark.storage.DiskBlockObjectWriter.initialize(DiskBlockObjectWriter.scala:103)
at org.apache.spark.storage.DiskBlockObjectWriter.open(DiskBlockObjectWriter.scala:116)
at org.apache.spark.storage.DiskBlockObjectWriter.write(DiskBlockObjectWriter.scala:237)
at org.apache.spark.shuffle.sort.BypassMergeSortShuffleWriter.write(BypassMergeSortShuffleWriter.java:151)
at org.apache.spark.scheduler.ShuffleMapTask.runTask(ShuffleMapTask.scala:96)
at org.apache.spark.scheduler.ShuffleMapTask.runTask(ShuffleMapTask.scala:53)
at org.apache.spark.scheduler.Task.run(Task.scala:109)
at org.apache.spark.executor.Executor$TaskRunner.run(Executor.scala:345)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624)
at java.lang.Thread.run(Thread.java:748)
Driver stacktrace:
18/03/21 14:27:52 INFO DAGScheduler: Job 706 failed: collectAsMap at RandomForest.scala:928, took 0,045648 s