SpringData JPA Transaction management - jpa

please help me about Spring JPA Transaction Management
I have two methods: usersService.addUser and authoritiesService.addNew
#Service
#Transactional(propagation = PROPAGATION.SUPPORTS, readOnly=true)
public class UsersService {
#Autowired
UsersRepository usersRepository;
#Autowired
AuthotitiesRepository authoritiesReposotory;
#Transaction
public addUser(...){
usersRespository.addUser...
authoritiesRepository.addNew...
}
...
public interface UsersRepository extends JpaRepository<Users, String> {
#Transactional
#Modifying
#Query(value = "insert into users..."
}
public interface AuthoritiesRepository extends JpaRepository<Users, String> {
#Transactional
#Modifying
#Query(value = "insert into abc ...."
}
The problem is when authoritiesRepository.addNew throws Exception(by some SQL syntax) I want to automatically rollback user info.
How can I configure in repository, service ?
Here is the exception trace:
2019-05-22 08:33:16.185 WARN 2276 --- [nio-8080-exec-4] o.h.engine.jdbc.spi.SqlExceptionHelper : SQL Error: 42102, SQLState: 42S02
2019-05-22 08:33:16.185 ERROR 2276 --- [nio-8080-exec-4] o.h.engine.jdbc.spi.SqlExceptionHelper : Table "AUTHORITIESS" not found; SQL statement:
insert into authoritiess(username, authority) values(?, ?) [42102-199]
2019-05-22 08:33:16.220 ERROR 2276 --- [nio-8080-exec-4] o.s.t.i.TransactionInterceptor : Application exception overridden by commit exception
com.springboot.example.exception.DbCRUDException: Error on add user
at com.springboot.example.security.service.UsersService.addUser(UsersService.java:141) ~[classes/:na]
at com.springboot.example.security.service.UsersService$$FastClassBySpringCGLIB$$3d37fb4e.invoke() ~[classes/:na]
at org.springframework.cglib.proxy.MethodProxy.invoke(MethodProxy.java:218) [spring-core-5.1.6.RELEASE.jar:5.1.6.RELEASE]
at org.springframework.aop.framework.CglibAopProxy$CglibMethodInvocation.invokeJoinpoint(CglibAopProxy.java:749) [spring-aop-5.1.6.RELEASE.jar:5.1.6.RELEASE]
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:163) [spring-aop-5.1.6.RELEASE.jar:5.1.6.RELEASE]
at org.springframework.dao.support.PersistenceExceptionTranslationInterceptor.invoke(PersistenceExceptionTranslationInterceptor.java:139) ~[spring-tx-5.1.6.RELEASE.jar:5.1.6.RELEASE]
at org.apache.tomcat.util.net.SocketProcessorBase.run(SocketProcessorBase.java:49) [tomcat-embed-core-9.0.17.jar:9.0.17]
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149) [na:1.8.0_162]
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624) [na:1.8.0_162]
at org.apache.tomcat.util.threads.TaskThread$WrappingRunnable.run(TaskThread.java:61) [tomcat-embed-core-9.0.17.jar:9.0.17]
at java.lang.Thread.run(Thread.java:748) [na:1.8.0_162]
Caused by: com.springboot.example.exception.DbCRUDException: Error on add authority
at com.springboot.example.security.service.AuthoritiesService.addNew(AuthoritiesService.java:58) ~[classes/:na]
at com.springboot.example.security.service.UsersService.addUser(UsersService.java:139) ~[classes/:na]
... 114 common frames omitted
Caused by: org.springframework.dao.InvalidDataAccessResourceUsageException: could not prepare statement; SQL [insert into authoritiess(username, authority) values(?, ?)]; nested exception is org.hibernate.exception.SQLGrammarException: could not prepare statement
at org.springframework.orm.jpa.vendor.HibernateJpaDialect.convertHibernateAccessException(HibernateJpaDialect.java:279) ~[spring-orm-5.1.6.RELEASE.jar:5.1.6.RELEASE]
at org.springframework.orm.jpa.vendor.HibernateJpaDialect.translateExceptionIfPossible(HibernateJpaDialect.java:253) ~[spring-orm-5.1.6.RELEASE.jar:5.1.6.RELEASE]
at org.springframework.data.jpa.repository.query.JpaQueryExecution$ModifyingExecution.doExecute(JpaQueryExecution.java:256) ~[spring-data-jpa-2.1.6.RELEASE.jar:2.1.6.RELEASE]
at org.springframework.data.jpa.repository.query.JpaQueryExecution.execute(JpaQueryExecution.java:91) ~[spring-data-jpa-2.1.6.RELEASE.jar:2.1.6.RELEASE]
at org.springframework.data.jpa.repository.query.AbstractJpaQuery.doExecute(AbstractJpaQuery.java:136) ~[spring-data-jpa-2.1.6.RELEASE.jar:2.1.6.RELEASE]
at org.springframework.data.jpa.repository.query.AbstractJpaQuery.execute(AbstractJpaQuery.java:125) ~[spring-data-jpa-2.1.6.RELEASE.jar:2.1.6.RELEASE]
at org.springframework.data.repository.core.support.RepositoryFactorySupport$QueryExecutorMethodInterceptor.doInvoke(RepositoryFactorySupport.java:605) ~[spring-data-commons-2.1.6.RELEASE.jar:2.1.6.RELEASE]
at org.springframework.data.repository.core.support.RepositoryFactorySupport$QueryExecutorMethodInterceptor.lambda$invoke$3(RepositoryFactorySupport.java:595) ~[sprin
at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:98) [spring-tx-5.1.6.RELEASE.jar:5.1.6.RELEASE]
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:186) [spring-aop-5.1.6.RELEASE.jar:5.1.6.RELEASE]
at org.springframework.dao.support.PersistenceExceptionTranslationInterceptor.invoke(PersistenceExceptionTranslationInterceptor.java:139) ~[spring-tx-5.1.6.RELEASE.jar:5.1.6.RELEASE]
... 134 common frames omitted
Caused by: org.h2.jdbc.JdbcSQLSyntaxErrorException: Table "AUTHORITIESS" not found; SQL statement:
insert into authoritiess(username, authority) values(?, ?) [42102-199]
at org.h2.message.DbException.getJdbcSQLException(DbException.java:451) ~[h2-1.4.199.jar:1.4.199]
at org.h2.message.DbException.getJdbcSQLException(DbException.java:427) ~[h2-1.4.199.jar:1.4.199]
at org.h2.message.DbException.get(DbException.java:205) ~[h2-1.4.199.jar:1.4.199]
2019-05-22 08:33:16.226 ERROR 2276 --- [nio-8080-exec-4] o.a.c.c.C.[.[.[/].[dispatcherServlet] : Servlet.service() for servlet [dispatcherServlet] in context with path [] threw exception [Request processing failed; nested exception is org.springframework.transaction.UnexpectedRollbackException: Transaction silently rolled back because it has been marked as rollback-only] with root cause
org.springframework.transaction.UnexpectedRollbackException: Transaction silently rolled back because it has been marked as rollback-only
at org.springframework.transaction.support.AbstractPlatformTransactionManager.processCommit(AbstractPlatformTransactionManager.java:755) ~[spring-tx-5.1.6.RELEASE.jar:

As #thanhngo alread mentioned. This is how to do it.
You already have the correct annotation on the addUser method and any RuntimeException will cause the transaction to be rolled back.
Make sure that usersRespository.addUser... and authoritiesReposotory.addNew... also have the #Transactional annotation

Related

Spring boot + quartz scheduler + postgresql fails to create quartz related tables

I am trying to create a Quartz scheduler microservice. Below is my Quartz configuration
#Configuration
#Slf4j
public class QuartzConfiguration {
#Value("${spring.quartz.jdbc.initialize-schema}")
String checkVal;
#Autowired
private ApplicationContext applicationContext;
#Autowired
#Qualifier("appDataSource")
DataSource dataSource;
/**
* #return map of properties to configure quartz
*/
private Properties getQuartzProperties() {
Properties properties = new Properties();
properties.put("org.quartz.jobStore.useProperties", "true");
properties.put("org.quartz.job-store-type", "jdbc");
properties.put("org.quartz.jobStore.class", "org.quartz.impl.jdbcjobstore.JobStoreTX");
properties.put("org.quartz.jobStore.driverDelegateClass", "org.quartz.impl.jdbcjobstore.PostgreSQLDelegate");
properties.put("org.quartz.jobStore.dataSource", "appDataSource");
return properties;
}
#Bean
public SchedulerFactoryBean scheduler() {
log.info("******************************* {} *******************************", this.checkVal);
SchedulerFactoryBean schedulerFactory = new SchedulerFactoryBean();
schedulerFactory.setJobFactory(springBeanJobFactory());
schedulerFactory.setDataSource(this.dataSource);
schedulerFactory.setQuartzProperties(getQuartzProperties());
return schedulerFactory;
}
#Bean
public SpringBeanJobFactory springBeanJobFactory() {
AutoWiringSpringBeanJobFactory jobFactory = new AutoWiringSpringBeanJobFactory();
jobFactory.setApplicationContext(applicationContext);
return jobFactory;
}
}
My application.properties is as follows
spring.quartz.jdbc.initialize-schema=always
The datasource bean is created by a separate library and successfully injected into the configuration class.
When I run the application the scheduler and all the beans corresponding to Quartz are created. However, the tables related to quartz are not created. Due to the same, I get the below exception.
org.springframework.context.ApplicationContextException: Failed to start bean 'scheduler'; nested exception is org.springframework.scheduling.SchedulingException: Could not start Quartz Scheduler; nested exception is org.quartz.SchedulerConfigException: Failure occured during job recovery. [See nested exception: org.quartz.impl.jdbcjobstore.LockException: Failure obtaining db row lock: ERROR: current transaction is aborted, commands ignored until end of transaction block [See nested exception: org.postgresql.util.PSQLException: ERROR: current transaction is aborted, commands ignored until end of transaction block]]
at org.springframework.context.support.DefaultLifecycleProcessor.doStart(DefaultLifecycleProcessor.java:185) ~[spring-context-5.2.8.RELEASE.jar:5.2.8.RELEASE]
at org.springframework.context.support.DefaultLifecycleProcessor.access$200(DefaultLifecycleProcessor.java:53) ~[spring-context-5.2.8.RELEASE.jar:5.2.8.RELEASE]
at org.springframework.context.support.DefaultLifecycleProcessor$LifecycleGroup.start(DefaultLifecycleProcessor.java:360) ~[spring-context-5.2.8.RELEASE.jar:5.2.8.RELEASE]
at org.springframework.context.support.DefaultLifecycleProcessor.startBeans(DefaultLifecycleProcessor.java:158) ~[spring-context-5.2.8.RELEASE.jar:5.2.8.RELEASE]
at org.springframework.context.support.DefaultLifecycleProcessor.onRefresh(DefaultLifecycleProcessor.java:122) ~[spring-context-5.2.8.RELEASE.jar:5.2.8.RELEASE]
at org.springframework.context.support.AbstractApplicationContext.finishRefresh(AbstractApplicationContext.java:895) ~[spring-context-5.2.8.RELEASE.jar:5.2.8.RELEASE]
at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:554) ~[spring-context-5.2.8.RELEASE.jar:5.2.8.RELEASE]
at org.springframework.boot.web.servlet.context.ServletWebServerApplicationContext.refresh(ServletWebServerApplicationContext.java:143) ~[spring-boot-2.3.3.RELEASE.jar:2.3.3.RELEASE]
at org.springframework.boot.SpringApplication.refresh(SpringApplication.java:758) ~[spring-boot-2.3.3.RELEASE.jar:2.3.3.RELEASE]
at org.springframework.boot.SpringApplication.refresh(SpringApplication.java:750) ~[spring-boot-2.3.3.RELEASE.jar:2.3.3.RELEASE]
at org.springframework.boot.SpringApplication.refreshContext(SpringApplication.java:397) ~[spring-boot-2.3.3.RELEASE.jar:2.3.3.RELEASE]
at org.springframework.boot.SpringApplication.run(SpringApplication.java:315) ~[spring-boot-2.3.3.RELEASE.jar:2.3.3.RELEASE]
at org.springframework.boot.SpringApplication.run(SpringApplication.java:1237) ~[spring-boot-2.3.3.RELEASE.jar:2.3.3.RELEASE]
at org.springframework.boot.SpringApplication.run(SpringApplication.java:1226) ~[spring-boot-2.3.3.RELEASE.jar:2.3.3.RELEASE]
at com.glidetech.scheduler.service.SchedulerApplication.main(SchedulerApplication.java:30) ~[classes/:na]
Caused by: org.springframework.scheduling.SchedulingException: Could not start Quartz Scheduler; nested exception is org.quartz.SchedulerConfigException: Failure occured during job recovery. [See nested exception: org.quartz.impl.jdbcjobstore.LockException: Failure obtaining db row lock: ERROR: current transaction is aborted, commands ignored until end of transaction block [See nested exception: org.postgresql.util.PSQLException: ERROR: current transaction is aborted, commands ignored until end of transaction block]]
at org.springframework.scheduling.quartz.SchedulerFactoryBean.start(SchedulerFactoryBean.java:803) ~[spring-context-support-5.2.8.RELEASE.jar:5.2.8.RELEASE]
at org.springframework.context.support.DefaultLifecycleProcessor.doStart(DefaultLifecycleProcessor.java:182) ~[spring-context-5.2.8.RELEASE.jar:5.2.8.RELEASE]
... 14 common frames omitted
Caused by: org.quartz.SchedulerConfigException: Failure occured during job recovery.
at org.quartz.impl.jdbcjobstore.JobStoreSupport.schedulerStarted(JobStoreSupport.java:697) ~[quartz-2.3.2.jar:na]
at org.quartz.core.QuartzScheduler.start(QuartzScheduler.java:539) ~[quartz-2.3.2.jar:na]
at org.quartz.impl.StdScheduler.start(StdScheduler.java:142) ~[quartz-2.3.2.jar:na]
at org.springframework.scheduling.quartz.SchedulerFactoryBean.startScheduler(SchedulerFactoryBean.java:728) ~[spring-context-support-5.2.8.RELEASE.jar:5.2.8.RELEASE]
at org.springframework.scheduling.quartz.SchedulerFactoryBean.start(SchedulerFactoryBean.java:800) ~[spring-context-support-5.2.8.RELEASE.jar:5.2.8.RELEASE]
... 15 common frames omitted
Caused by: org.quartz.impl.jdbcjobstore.LockException: Failure obtaining db row lock: ERROR: current transaction is aborted, commands ignored until end of transaction block
at org.quartz.impl.jdbcjobstore.StdRowLockSemaphore.executeSQL(StdRowLockSemaphore.java:184) ~[quartz-2.3.2.jar:na]
at org.quartz.impl.jdbcjobstore.DBSemaphore.obtainLock(DBSemaphore.java:113) ~[quartz-2.3.2.jar:na]
at org.quartz.impl.jdbcjobstore.JobStoreSupport.executeInNonManagedTXLock(JobStoreSupport.java:3857) ~[quartz-2.3.2.jar:na]
at org.quartz.impl.jdbcjobstore.JobStoreSupport.recoverJobs(JobStoreSupport.java:839) ~[quartz-2.3.2.jar:na]
at org.quartz.impl.jdbcjobstore.JobStoreSupport.schedulerStarted(JobStoreSupport.java:695) ~[quartz-2.3.2.jar:na]
... 19 common frames omitted
Caused by: org.postgresql.util.PSQLException: ERROR: current transaction is aborted, commands ignored until end of transaction block
at org.postgresql.core.v3.QueryExecutorImpl.receiveErrorResponse(QueryExecutorImpl.java:2532) ~[postgresql-42.2.14.jar:42.2.14]
at org.postgresql.core.v3.QueryExecutorImpl.processResults(QueryExecutorImpl.java:2267) ~[postgresql-42.2.14.jar:42.2.14]
at org.postgresql.core.v3.QueryExecutorImpl.execute(QueryExecutorImpl.java:312) ~[postgresql-42.2.14.jar:42.2.14]
at org.postgresql.jdbc.PgStatement.executeInternal(PgStatement.java:448) ~[postgresql-42.2.14.jar:42.2.14]
at org.postgresql.jdbc.PgStatement.execute(PgStatement.java:369) ~[postgresql-42.2.14.jar:42.2.14]
at org.postgresql.jdbc.PgPreparedStatement.executeWithFlags(PgPreparedStatement.java:153) ~[postgresql-42.2.14.jar:42.2.14]
at org.postgresql.jdbc.PgPreparedStatement.executeQuery(PgPreparedStatement.java:103) ~[postgresql-42.2.14.jar:42.2.14]
at com.zaxxer.hikari.pool.ProxyPreparedStatement.executeQuery(ProxyPreparedStatement.java:52) ~[HikariCP-3.4.5.jar:na]
at com.zaxxer.hikari.pool.HikariProxyPreparedStatement.executeQuery(HikariProxyPreparedStatement.java) ~[HikariCP-3.4.5.jar:na]
at org.quartz.impl.jdbcjobstore.StdRowLockSemaphore.executeSQL(StdRowLockSemaphore.java:123) ~[quartz-2.3.2.jar:na]
... 23 common frames omitted
Caused by: org.postgresql.util.PSQLException: ERROR: relation "qrtz_locks" does not exist
Position: 15
... 33 common frames omitted
I verified the following.
Whether values from application.properties are detected.
Whether appDataSource is available and configured.
I am not sure what I am missing. I appreciate any help.

problem with postgresql sequence and hibernate

I often read this site, but this is the first time I write, hope I won't make mistakes and apologize for my bad english.
I get to the point: I have to develop code to insert records on a single table of a postgresql db, using hibernate on a Springboot project. The table has got a sequence, and I would like to use it to get the id's value.
Into the hbm.xml file of my table I have this:
table="td_tito">
<id name="idTito" column="ID_TITO">
<generator class="sequence">
<param name="sequence">seq_td_tito</param>
</generator>
</id>
<property ..../>
<property ..../>
In the bean class I have the variable idTito and its getter and setter methods.
When i try to save by calling save method of my class that implements JpaRepository interface, I get the following exception:
12:56:06.746 [main] DEBUG org.hibernate.engine.transaction.internal.TransactionImpl - On TransactionImpl creation, JpaCompliance#isJpaTransactionComplianceEnabled == false
12:56:06.747 [main] DEBUG org.hibernate.engine.transaction.internal.TransactionImpl - begin
12:56:06.756 [main] DEBUG org.hibernate.SQL - select nextval ('hibernate_sequence')
Hibernate: select nextval ('hibernate_sequence')
12:56:06.782 [main] DEBUG org.hibernate.engine.jdbc.spi.SqlExceptionHelper - could not extract ResultSet [n/a]
org.postgresql.util.PSQLException: ERROR: relation "hibernate_sequence" does not exist
Position: 17
at org.postgresql.core.v3.QueryExecutorImpl.receiveErrorResponse(QueryExecutorImpl.java:2510)
at org.postgresql.core.v3.QueryExecutorImpl.processResults(QueryExecutorImpl.java:2245)
at org.postgresql.core.v3.QueryExecutorImpl.execute(QueryExecutorImpl.java:311)
at org.postgresql.jdbc.PgStatement.executeInternal(PgStatement.java:447)
at org.postgresql.jdbc.PgStatement.execute(PgStatement.java:368)
at org.postgresql.jdbc.PgPreparedStatement.executeWithFlags(PgPreparedStatement.java:159)
at org.postgresql.jdbc.PgPreparedStatement.executeQuery(PgPreparedStatement.java:109)
at org.hibernate.engine.jdbc.internal.ResultSetReturnImpl.extract(ResultSetReturnImpl.java:57)
at org.hibernate.id.enhanced.SequenceStructure$1.getNextValue(SequenceStructure.java:95)
at org.hibernate.id.enhanced.NoopOptimizer.generate(NoopOptimizer.java:40)
at org.hibernate.id.enhanced.SequenceStyleGenerator.generate(SequenceStyleGenerator.java:523)
at org.hibernate.event.internal.AbstractSaveEventListener.saveWithGeneratedId(AbstractSaveEventListener.java:115)
at org.hibernate.event.internal.DefaultSaveOrUpdateEventListener.saveWithGeneratedOrRequestedId(DefaultSaveOrUpdateEventListener.java:194)
at org.hibernate.event.internal.DefaultSaveEventListener.saveWithGeneratedOrRequestedId(DefaultSaveEventListener.java:38)
at org.hibernate.event.internal.DefaultSaveOrUpdateEventListener.entityIsTransient(DefaultSaveOrUpdateEventListener.java:179)
at org.hibernate.event.internal.DefaultSaveEventListener.performSaveOrUpdate(DefaultSaveEventListener.java:32)
at org.hibernate.event.internal.DefaultSaveOrUpdateEventListener.onSaveOrUpdate(DefaultSaveOrUpdateEventListener.java:75)
at org.hibernate.event.service.internal.EventListenerGroupImpl.fireEventOnEachListener(EventListenerGroupImpl.java:102)
at org.hibernate.internal.SessionImpl.fireSave(SessionImpl.java:626)
at org.hibernate.internal.SessionImpl.save(SessionImpl.java:619)
at org.hibernate.internal.SessionImpl.save(SessionImpl.java:614)
at com.xxx.hibernate.TestHIbernate.saveTdtito(TestHIbernate.java:122)
at com.xxx.hibernate.TestHIbernate.main(TestHIbernate.java:20)
12:56:06.782 [main] WARN org.hibernate.engine.jdbc.spi.SqlExceptionHelper - SQL Error: 0, SQLState: 42P01
12:56:06.782 [main] ERROR org.hibernate.engine.jdbc.spi.SqlExceptionHelper - ERROR: relation "hibernate_sequence" does not exist
Position: 17
This is the Entity Class:
#Entity
public class TdTito {
#Id
#GeneratedValue(strategy = GenerationType.AUTO)
private Long idTito;
private int lev;
...
public Long getIdTito() {
return idTito;
}
public void setIdTito(Long idTito) {
this.idTito = idTito;
}
public int getLev() {
return lev;
}
public void setLev(int lev) {
this.lev = lev;
}
}
By removing the annotations I get this error as I try to start the Application:
2020-06-16 15:26:46.394 ERROR 23244 --- [ restartedMain] o.s.boot.SpringApplication : Application run failed
org.springframework.beans.factory.BeanCreationException: Error creating bean with name 'entityManagerFactory' defined in class path resource [org/springframework/boot/autoconfigure/orm/jpa/HibernateJpaConfiguration.class]: Invocation of init method failed; nested exception is org.hibernate.AnnotationException: No identifier specified for entity: com.xxx..entities.mappingdb.TdTito
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1796) ~[spring-beans-5.2.4.RELEASE.jar:5.2.4.RELEASE]
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:595) ~[spring-beans-5.2.4.RELEASE.jar:5.2.4.RELEASE]
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:517) ~[spring-beans-5.2.4.RELEASE.jar:5.2.4.RELEASE]
at org.springframework.beans.factory.support.AbstractBeanFactory.lambda$doGetBean$0(AbstractBeanFactory.java:323) ~[spring-beans-5.2.4.RELEASE.jar:5.2.4.RELEASE]
at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:222) ~[spring-beans-5.2.4.RELEASE.jar:5.2.4.RELEASE]
at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:321) ~[spring-beans-5.2.4.RELEASE.jar:5.2.4.RELEASE]
at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:202) ~[spring-beans-5.2.4.RELEASE.jar:5.2.4.RELEASE]
at org.springframework.context.support.AbstractApplicationContext.getBean(AbstractApplicationContext.java:1108) ~[spring-context-5.2.4.RELEASE.jar:5.2.4.RELEASE]
at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:868) ~[spring-context-5.2.4.RELEASE.jar:5.2.4.RELEASE]
at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:550) ~[spring-context-5.2.4.RELEASE.jar:5.2.4.RELEASE]
at org.springframework.boot.web.servlet.context.ServletWebServerApplicationContext.refresh(ServletWebServerApplicationContext.java:141) ~[spring-boot-2.2.5.RELEASE.jar:2.2.5.RELEASE]
at org.springframework.boot.SpringApplication.refresh(SpringApplication.java:747) [spring-boot-2.2.5.RELEASE.jar:2.2.5.RELEASE]
at org.springframework.boot.SpringApplication.refreshContext(SpringApplication.java:397) [spring-boot-2.2.5.RELEASE.jar:2.2.5.RELEASE]
at org.springframework.boot.SpringApplication.run(SpringApplication.java:315) [spring-boot-2.2.5.RELEASE.jar:2.2.5.RELEASE]
at org.springframework.boot.SpringApplication.run(SpringApplication.java:1226) [spring-boot-2.2.5.RELEASE.jar:2.2.5.RELEASE]
at org.springframework.boot.SpringApplication.run(SpringApplication.java:1215) [spring-boot-2.2.5.RELEASE.jar:2.2.5.RELEASE]
at com.xxx..Application.main(Application.java:14) [classes/:na]
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) ~[na:1.8.0_241]
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) ~[na:1.8.0_241]
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) ~[na:1.8.0_241]
at java.lang.reflect.Method.invoke(Method.java:498) ~[na:1.8.0_241]
at org.springframework.boot.devtools.restart.RestartLauncher.run(RestartLauncher.java:49) [spring-boot-devtools-2.2.5.RELEASE.jar:2.2.5.RELEASE]
Caused by: org.hibernate.AnnotationException: No identifier specified for entity: com.xxx..entities.mappingdb.TdTito
at org.hibernate.cfg.InheritanceState.determineDefaultAccessType(InheritanceState.java:266) ~[hibernate-core-5.4.12.Final.jar:5.4.12.Final]
at org.hibernate.cfg.InheritanceState.getElementsToProcess(InheritanceState.java:211) ~[hibernate-core-5.4.12.Final.jar:5.4.12.Final]
at org.hibernate.cfg.AnnotationBinder.bindClass(AnnotationBinder.java:781) ~[hibernate-core-5.4.12.Final.jar:5.4.12.Final]
at org.hibernate.boot.model.source.internal.annotations.AnnotationMetadataSourceProcessorImpl.processEntityHierarchies(AnnotationMetadataSourceProcessorImpl.java:254) ~[hibernate-core-5.4.12.Final.jar:5.4.12.Final]
at org.hibernate.boot.model.process.spi.MetadataBuildingProcess$1.processEntityHierarchies(MetadataBuildingProcess.java:230) ~[hibernate-core-5.4.12.Final.jar:5.4.12.Final]
at org.hibernate.boot.model.process.spi.MetadataBuildingProcess.complete(MetadataBuildingProcess.java:273) ~[hibernate-core-5.4.12.Final.jar:5.4.12.Final]
at org.hibernate.jpa.boot.internal.EntityManagerFactoryBuilderImpl.metadata(EntityManagerFactoryBuilderImpl.java:1202) ~[hibernate-core-5.4.12.Final.jar:5.4.12.Final]
at org.hibernate.jpa.boot.internal.EntityManagerFactoryBuilderImpl.build(EntityManagerFactoryBuilderImpl.java:1233) ~[hibernate-core-5.4.12.Final.jar:5.4.12.Final]
at org.springframework.orm.jpa.vendor.SpringHibernateJpaPersistenceProvider.createContainerEntityManagerFactory(SpringHibernateJpaPersistenceProvider.java:58) ~[spring-orm-5.2.4.RELEASE.jar:5.2.4.RELEASE]
at org.springframework.orm.jpa.LocalContainerEntityManagerFactoryBean.createNativeEntityManagerFactory(LocalContainerEntityManagerFactoryBean.java:365) ~[spring-orm-5.2.4.RELEASE.jar:5.2.4.RELEASE]
at org.springframework.orm.jpa.AbstractEntityManagerFactoryBean.buildNativeEntityManagerFactory(AbstractEntityManagerFactoryBean.java:391) ~[spring-orm-5.2.4.RELEASE.jar:5.2.4.RELEASE]
at org.springframework.orm.jpa.AbstractEntityManagerFactoryBean.afterPropertiesSet(AbstractEntityManagerFactoryBean.java:378) ~[spring-orm-5.2.4.RELEASE.jar:5.2.4.RELEASE]
at org.springframework.orm.jpa.LocalContainerEntityManagerFactoryBean.afterPropertiesSet(LocalContainerEntityManagerFactoryBean.java:341) ~[spring-orm-5.2.4.RELEASE.jar:5.2.4.RELEASE]
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1855) ~[spring-beans-5.2.4.RELEASE.jar:5.2.4.RELEASE]
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1792) ~[spring-beans-5.2.4.RELEASE.jar:5.2.4.RELEASE]
... 21 common frames omitted
Any suggestion? Thank you so much to everybody
Step
If you are using you must remove all annotations from the entity
This line is causing the search for hibernate_sequence:
#Id
#GeneratedValue(strategy = GenerationType.AUTO)
Simply remove this line.
But I recommend to use use annotations. This will look like this:
#Id
#SequenceGenerator(name = "seq_td_tito", sequenceName = "seq_td_tito")
#GeneratedValue(generator = "seq_td_tito", strategy = GenerationType.SEQUENCE)
private Long idTito;
I struggled for sometime, then following combination worked, for the same strategy
#Id
#GeneratedValue(strategy = GenerationType.AUTO)
my application.properties has these entries.
spring.datasource.username= postgres
spring.datasource.password= mypassword
spring.datasource.driver-class-name= org.postgresql.Driver
spring.jpa.generate-ddl= true
spring.jpa.hibernate.ddl-auto= update
spring.jpa.properties.hibernate.dialect= org.hibernate.dialect.PostgreSQLDialect
and pom.xml has one dependency as needed.
<dependency>
<groupId>org.postgresql</groupId>
<artifactId>postgresql</artifactId>
<scope>runtime</scope>
</dependency>

Query Native - could not extract ResultSet

i have a problem.I explain my situation: SpringBoot + Hibernate + Multitenant (DB master + DB for tenant) + Postgressql. I have two datasource configurations, one for the master and one for each client's database. I need doing a query native in JPARepository And that's the only way I can do it
In my JPARepository :
public interface IEntity extends JpaRepository<Entity, Integer> {
........
#Query(value = "ALTER SEQUENCE entity_identity_seq RESTART", nativeQuery = true)
#Modifying ///Add 1
#Transactional ///Add 2
void restarID();
}
when I first call the method, I got:
> Hibernate:
ALTER SEQUENCE entity_identity_seq RESTART
> 2019-09-10 15:41:53.919 WARN 18680 --- [nio-8080-exec-2] o.h.engine.jdbc.spi.SqlExceptionHelper : SQL Error: 0, SQLState: 02000
> 2019-09-10 15:41:53.919 ERROR 18680 --- [nio-8080-exec-2] o.h.engine.jdbc.spi.SqlExceptionHelper : La consulta no retornó ningún resultado.
> 2019-09-10 15:41:53.940 ERROR 18680 --- [nio-8080-exec-2] o.a.c.c.C.[.[.[/].[dispatcherServlet] : Servlet.service() for servlet [dispatcherServlet] in context with path [] threw exception [Request processing failed; nested exception is org.springframework.orm.jpa.JpaSystemException: could not extract ResultSet; nested exception is org.hibernate.exception.GenericJDBCException: could not extract ResultSet] with root cause
org.postgresql.util.PSQLException: La consulta no retornó ningún resultado.
After looking for solutions and discovered that he needed to add
#Query(value = "ALTER SEQUENCE entity_identity_seq RESTART", nativeQuery = true)
#Modifying
void restarID();
But the query is not made in hibernate and this error comes up:
> 2019-09-10 15:46:57.972 ERROR 14392 --- [nio-8080-exec-1] o.a.c.c.C.[.[.[/].[dispatcherServlet] : Servlet.service() for servlet [dispatcherServlet] in context with path [] threw exception [Request processing failed; nested exception is org.springframework.dao.InvalidDataAccessApiUsageException: Executing an update/delete query; nested exception is javax.persistence.TransactionRequiredException: Executing an update/delete query] with root cause
javax.persistence.TransactionRequiredException: Executing an update/delete query
I keep searching and find that I should add #Transactional. Then :
#Query(value = "ALTER SEQUENCE entity_identity_seq RESTART", nativeQuery = true)
#Modifying
#Transactional
void restarID();
But, then come back, I call the method, I got:
> Hibernate:
ALTER SEQUENCE entity_identity_seq RESTART
> 2019-09-10 15:41:53.919 WARN 18680 --- [nio-8080-exec-2] o.h.engine.jdbc.spi.SqlExceptionHelper : SQL Error: 0, SQLState: 02000
> 2019-09-10 15:41:53.919 ERROR 18680 --- [nio-8080-exec-2] o.h.engine.jdbc.spi.SqlExceptionHelper : La consulta no retornó ningún resultado.
> 2019-09-10 15:41:53.940 ERROR 18680 --- [nio-8080-exec-2] o.a.c.c.C.[.[.[/].[dispatcherServlet] : Servlet.service() for servlet [dispatcherServlet] in context with path [] threw exception [Request processing failed; nested exception is org.springframework.orm.jpa.JpaSystemException: could not extract ResultSet; nested exception is org.hibernate.exception.GenericJDBCException: could not extract ResultSet] with root cause
org.postgresql.util.PSQLException: La consulta no retornó ningún resultado.
Please, will anyone have any recommendations?
I am new to hibernate. Thank you.
If someone yet have the same problem, I've resolved it, adding the next to the query:
#Modifying(clearAutomatically = true)
#Transactional

With in-mem database for testing, entity manager not releasing locks 'unable to obtain lock'

I have a Spring Boot app with some integration tests inspecting the results from front-end operations on data in the database.
The app uses DataNucleus JPA underneath spring-data-jpa and spring-data-rest, with an in-memory database, e.g. Derby, set up automatically via Spring Boot testing.
I used to use Hibernate, but I swopped it for DataNucleus. The tests all passed with Hibernate, but now my test JdbcTemplate queries are hanging, as though JPA isn't releasing its locks.
I've tried it with H2 (fails silently), Derby (hangs until time-out) and HSQLDB (hangs forever).
I have tried various work-arounds, e.g. without transactions #Transactional(Transactional.TxType.NEVER) or with/without commits #Rollback(true/false)
Spring Boot instantiates the datasource automatically and injects it into the EntityManagerFactory and the JdbcTemplate.
This is the test:
#ExtendWith(SpringExtension.class)
#SpringBootTest(webEnvironment = SpringBootTest.WebEnvironment.MOCK,
classes = { TestDataSourceConfig.class })
#EnableAutoConfiguration
#AutoConfigureMockMvc
#AutoConfigureTestDatabase(connection = EmbeddedDatabaseConnection.DERBY)
#Transactional
public class SymbolRestTests {
#Autowired
private MockMvc mockMvc;
#Autowired
private JdbcTemplate jdbcTemplate;
#Autowired
private SymbolRepository symbolRepository;
#PersistenceContext
private EntityManager entityManager;
#Before
public void setUp() throws Exception {
symbolRepository.deleteAll();
entityManager.flush();
entityManager.clear();
}
#Test
public void shouldCreateEntity() throws Exception {
String testTitle = "TEST.CODE.1";
String testExtra = "Test for SymbolRestTests.java";
String json = createJsonExample(testTitle, testExtra, true);
MockHttpServletRequestBuilder requestBuilder =
post("/symbols").content(json);
mockMvc.perform(requestBuilder)
.andExpect(status().isCreated())
.andExpect(header().string("Location",
containsString("symbols/")));
entityManager.flush();
entityManager.close(); // this didn't help
String sql = "SELECT count(*) FROM symbol WHERE title = ?";
// exception thrown on this next line
int count = jdbcTemplate.queryForObject(
sql, new Object[] { testTitle }, Integer.class);
Assert.assertThat(count, is(1));
}
}
and this is the error from HSQLDB (seems to be the most informative):
org.springframework.dao.CannotAcquireLockException: PreparedStatementCallback;
SQL [SELECT count(*) FROM symbol WHERE title = ?];
A lock could not be obtained within the time requested;
nested exception is java.sql.SQLTransactionRollbackException:
A lock could not be obtained within the time requested
at org.springframework.jdbc.support.SQLErrorCodeSQLExceptionTranslator.doTranslate(SQLErrorCodeSQLExceptionTranslator.java:259)
at org.springframework.jdbc.support.AbstractFallbackSQLExceptionTranslator.translate(AbstractFallbackSQLExceptionTranslator.java:73)
at org.springframework.jdbc.core.JdbcTemplate.execute(JdbcTemplate.java:649)
at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:684)
at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:716)
at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:726)
at org.springframework.jdbc.core.JdbcTemplate.queryForObject(JdbcTemplate.java:794)
at org.springframework.jdbc.core.JdbcTemplate.queryForObject(JdbcTemplate.java:813)
at com.gis.integration.SymbolRestTests.shouldCreateEntity(SymbolRestTests.java:127)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:498)
at org.junit.platform.commons.util.ReflectionUtils.invokeMethod(ReflectionUtils.java:316)
at org.junit.jupiter.engine.execution.ExecutableInvoker.invoke(ExecutableInvoker.java:114)
at org.junit.jupiter.engine.descriptor.MethodTestDescriptor.lambda$invokeTestMethod$6(MethodTestDescriptor.java:171)
at org.junit.jupiter.engine.execution.ThrowableCollector.execute(ThrowableCollector.java:40)
at org.junit.jupiter.engine.descriptor.MethodTestDescriptor.invokeTestMethod(MethodTestDescriptor.java:168)
at org.junit.jupiter.engine.descriptor.MethodTestDescriptor.execute(MethodTestDescriptor.java:115)
at org.junit.jupiter.engine.descriptor.MethodTestDescriptor.execute(MethodTestDescriptor.java:57)
at org.junit.platform.engine.support.hierarchical.HierarchicalTestExecutor.lambda$execute$1(HierarchicalTestExecutor.java:81)
at org.junit.platform.engine.support.hierarchical.SingleTestExecutor.executeSafely(SingleTestExecutor.java:66)
at org.junit.platform.engine.support.hierarchical.HierarchicalTestExecutor.execute(HierarchicalTestExecutor.java:76)
at org.junit.platform.engine.support.hierarchical.HierarchicalTestExecutor.lambda$execute$1(HierarchicalTestExecutor.java:91)
at org.junit.platform.engine.support.hierarchical.SingleTestExecutor.executeSafely(SingleTestExecutor.java:66)
at org.junit.platform.engine.support.hierarchical.HierarchicalTestExecutor.execute(HierarchicalTestExecutor.java:76)
at org.junit.platform.engine.support.hierarchical.HierarchicalTestExecutor.lambda$execute$1(HierarchicalTestExecutor.java:91)
at org.junit.platform.engine.support.hierarchical.SingleTestExecutor.executeSafely(SingleTestExecutor.java:66)
at org.junit.platform.engine.support.hierarchical.HierarchicalTestExecutor.execute(HierarchicalTestExecutor.java:76)
at org.junit.platform.engine.support.hierarchical.HierarchicalTestExecutor.execute(HierarchicalTestExecutor.java:51)
at org.junit.platform.engine.support.hierarchical.HierarchicalTestEngine.execute(HierarchicalTestEngine.java:43)
at org.junit.platform.launcher.core.DefaultLauncher.execute(DefaultLauncher.java:137)
at org.junit.platform.launcher.core.DefaultLauncher.execute(DefaultLauncher.java:87)
at org.junit.platform.launcher.Launcher.execute(Launcher.java:93)
at com.intellij.junit5.JUnit5IdeaTestRunner.startRunnerWithArgs(JUnit5IdeaTestRunner.java:61)
at com.intellij.rt.execution.junit.IdeaTestRunner$Repeater.startRunnerWithArgs(IdeaTestRunner.java:51)
at com.intellij.rt.execution.junit.JUnitStarter.prepareStreamsAndStart(JUnitStarter.java:242)
at com.intellij.rt.execution.junit.JUnitStarter.main(JUnitStarter.java:70)
Caused by: java.sql.SQLTransactionRollbackException: A lock could not be obtained within the time requested
at org.apache.derby.impl.jdbc.SQLExceptionFactory.getSQLException(Unknown Source)
at org.apache.derby.impl.jdbc.Util.generateCsSQLException(Unknown Source)
at org.apache.derby.impl.jdbc.TransactionResourceImpl.wrapInSQLException(Unknown Source)
at org.apache.derby.impl.jdbc.TransactionResourceImpl.handleException(Unknown Source)
at org.apache.derby.impl.jdbc.EmbedConnection.handleException(Unknown Source)
at org.apache.derby.impl.jdbc.ConnectionChild.handleException(Unknown Source)
at org.apache.derby.impl.jdbc.EmbedResultSet.closeOnTransactionError(Unknown Source)
at org.apache.derby.impl.jdbc.EmbedResultSet.movePosition(Unknown Source)
at org.apache.derby.impl.jdbc.EmbedResultSet.next(Unknown Source)
at org.springframework.jdbc.core.RowMapperResultSetExtractor.extractData(RowMapperResultSetExtractor.java:92)
at org.springframework.jdbc.core.RowMapperResultSetExtractor.extractData(RowMapperResultSetExtractor.java:60)
at org.springframework.jdbc.core.JdbcTemplate$1.doInPreparedStatement(JdbcTemplate.java:697)
at org.springframework.jdbc.core.JdbcTemplate.execute(JdbcTemplate.java:633)
... 35 more
Caused by: ERROR 40XL1: A lock could not be obtained within the time requested
at org.apache.derby.iapi.error.StandardException.newException(Unknown Source)
at org.apache.derby.iapi.error.StandardException.newException(Unknown Source)
at org.apache.derby.impl.services.locks.ConcurrentLockSet.lockObject(Unknown Source)
at org.apache.derby.impl.services.locks.ConcurrentLockSet.zeroDurationLockObject(Unknown Source)
at org.apache.derby.impl.services.locks.AbstractPool.zeroDurationlockObject(Unknown Source)
at org.apache.derby.impl.services.locks.ConcurrentPool.zeroDurationlockObject(Unknown Source)
at org.apache.derby.impl.store.raw.xact.RowLocking2nohold.lockRecordForRead(Unknown Source)
at org.apache.derby.impl.store.access.heap.HeapController.lockRow(Unknown Source)
at org.apache.derby.impl.store.access.heap.HeapController.lockRow(Unknown Source)
at org.apache.derby.impl.store.access.btree.index.B2IRowLocking3.lockRowOnPage(Unknown Source)
at org.apache.derby.impl.store.access.btree.index.B2IRowLocking3._lockScanRow(Unknown Source)
at org.apache.derby.impl.store.access.btree.index.B2IRowLockingRR.lockScanRow(Unknown Source)
at org.apache.derby.impl.store.access.btree.BTreeForwardScan.fetchRows(Unknown Source)
at org.apache.derby.impl.store.access.btree.BTreeScan.fetchNextGroup(Unknown Source)
at org.apache.derby.impl.sql.execute.BulkTableScanResultSet.reloadArray(Unknown Source)
at org.apache.derby.impl.sql.execute.BulkTableScanResultSet.getNextRowCore(Unknown Source)
at org.apache.derby.impl.sql.execute.ProjectRestrictResultSet.getNextRowCore(Unknown Source)
at org.apache.derby.impl.sql.execute.ScalarAggregateResultSet.getRowFromResultSet(Unknown Source)
at org.apache.derby.impl.sql.execute.ScalarAggregateResultSet.getNextRowCore(Unknown Source)
at org.apache.derby.impl.sql.execute.ProjectRestrictResultSet.getNextRowCore(Unknown Source)
at org.apache.derby.impl.sql.execute.BasicNoPutResultSetImpl.getNextRow(Unknown Source)
... 41 more
Update using DataNucleus transaction documentation I have added some DataNucleus-specific properties to the persistence.xml (without result):
<?xml version="1.0" encoding="UTF-8" ?>
<persistence version="2.1"
xmlns="http://xmlns.jcp.org/xml/ns/persistence"
xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
xsi:schemaLocation="http://xmlns.jcp.org/xml/ns/persistence
persistence_2_1.xsd">
<persistence-unit name="test">
<provider>org.datanucleus.api.jpa.PersistenceProviderImpl</provider>
<exclude-unlisted-classes>false</exclude-unlisted-classes>
<properties>
<property name="datanucleus.schema.autoCreateAll" value="true"/>
<property name="datanucleus.transactionIsolation" value="read-uncommitted"/>
<property name="datanucleus.NontransactionalRead" value="true"/>
<property name="datanucleus.NontransactionalWrite" value="true"/>
</properties>
</persistence-unit>
</persistence>
UPDATE #2
The log output at DEBUG level showing the DataNucleus-JPA/JdbcTemplate log statements (first the JPA INSERT, then the JdbcTemplate SELECT COUNT(*)):
2017-06-09 14:56:18.055 DEBUG 9492 --- [ main] DataNucleus.Connection : ManagedConnection(non-enlisted) "org.datanucleus.store.rdbms.ConnectionFactoryImpl$ManagedConnectionImpl#5621a671 [conn=org.apache.derby.impl.jdbc.EmbedConnection#2006fdaa, commitOnRelease=true, closeOnRelease=true, closeOnTxnEnd=true]" is being committed.
2017-06-09 14:56:18.055 DEBUG 9492 --- [ main] DataNucleus.Connection : ManagedConnection(non-enlisted) "org.datanucleus.store.rdbms.ConnectionFactoryImpl$ManagedConnectionImpl#5621a671 [conn=org.apache.derby.impl.jdbc.EmbedConnection#2006fdaa, commitOnRelease=true, closeOnRelease=true, closeOnTxnEnd=true]" closed
2017-06-09 14:56:18.068 DEBUG 9492 --- [ main] DataNucleus.Persistence : Object "com.bp.gis.tardis.entity.SymbolEntity#59c08cf1" being inserted into table "SYMBOL"
2017-06-09 14:56:18.071 DEBUG 9492 --- [ main] DataNucleus.Connection : ManagedConnection(non-enlisted) "org.datanucleus.store.rdbms.ConnectionFactoryImpl$ManagedConnectionImpl#63a7af06 [conn=null, commitOnRelease=false, closeOnRelease=false, closeOnTxnEnd=true]" opened with isolation level "read-uncommitted" and auto-commit=false
2017-06-09 14:56:18.074 DEBUG 9492 --- [ main] DataNucleus.Transaction : Running enlist operation on resource: org.datanucleus.store.rdbms.ConnectionFactoryImpl$EmulatedXAResource#3d4b45b, error code TMNOFLAGS and transaction: [DataNucleus Transaction, ID=Xid= , enlisted resources=[]]
2017-06-09 14:56:18.076 DEBUG 9492 --- [ main] DataNucleus.Connection : ManagedConnection(enlisted) "org.datanucleus.store.rdbms.ConnectionFactoryImpl$ManagedConnectionImpl#63a7af06 [conn=org.apache.derby.impl.jdbc.EmbedConnection#19d76106, commitOnRelease=false, closeOnRelease=false, closeOnTxnEnd=true]" starting for transaction "Xid= " with flags "0"
2017-06-09 14:56:18.078 DEBUG 9492 --- [ main] DataNucleus.Connection : ManagedConnection added to the pool : "org.datanucleus.store.rdbms.ConnectionFactoryImpl$ManagedConnectionImpl#63a7af06 [conn=org.apache.derby.impl.jdbc.EmbedConnection#19d76106, commitOnRelease=false, closeOnRelease=false, closeOnTxnEnd=true]" for key="org.datanucleus.ExecutionContextImpl#2c47a053" in factory="ConnectionFactory:tx[org.datanucleus.store.rdbms.ConnectionFactoryImpl#204c5ddf]"
2017-06-09 14:56:18.125 DEBUG 9492 --- [ main] DataNucleus.Datastore : Using PreparedStatement "org.datanucleus.store.rdbms.ParamLoggingPreparedStatement#37753b69" for connection "org.apache.derby.impl.jdbc.EmbedConnection#19d76106"
2017-06-09 14:56:18.134 DEBUG 9492 --- [ main] DataNucleus.Datastore.Native : INSERT INTO SYMBOL (ACTIVE,CREATED,EXTRA,GLOBAL_READ,GLOBAL_WRITE,LAST_MODIFIED,TITLE) VALUES (<'Y'>,<2017-06-09>,<null>,<'N'>,<'N'>,<2017-06-09>,<'TEST.CODE.1'>)
2017-06-09 14:56:18.169 DEBUG 9492 --- [ main] DataNucleus.Datastore.Persist : Execution Time = 36 ms (number of rows = 1) on PreparedStatement "org.datanucleus.store.rdbms.ParamLoggingPreparedStatement#37753b69"
2017-06-09 14:56:18.172 DEBUG 9492 --- [ main] DataNucleus.Datastore.Persist : Object "com.bp.gis.tardis.entity.SymbolEntity#59c08cf1" was inserted in the datastore and was given strategy value of "1"
2017-06-09 14:56:18.179 DEBUG 9492 --- [ main] DataNucleus.Cache : Object "com.bp.gis.tardis.entity.SymbolEntity#59c08cf1" (id="org.datanucleus.identity.IdentityReference#93fb44") being changed to be referenced by id="com.bp.gis.tardis.entity.SymbolEntity:1" in Level 1 cache
2017-06-09 14:56:18.180 DEBUG 9492 --- [ main] DataNucleus.Cache : Object "com.bp.gis.tardis.entity.SymbolEntity#59c08cf1" (id="com.bp.gis.tardis.entity.SymbolEntity:1") added to Level 1 cache (loadedFlags="[YYYYYYYYY]")
2017-06-09 14:56:18.180 DEBUG 9492 --- [ main] DataNucleus.Transaction : Object "com.bp.gis.tardis.entity.SymbolEntity#59c08cf1" (id="org.datanucleus.identity.IdentityReference#93fb44") enlisted in transactional cache is now enlisted using id="com.bp.gis.tardis.entity.SymbolEntity:1"
2017-06-09 14:56:18.181 DEBUG 9492 --- [ main] DataNucleus.Persistence : Insert of object "com.bp.gis.tardis.entity.SymbolEntity#59c08cf1" is calling insertPostProcessing for field "com.bp.gis.tardis.entity.SymbolEntity.timeSeriesList"
2017-06-09 14:56:18.181 DEBUG 9492 --- [ main] DataNucleus.Datastore : Closing PreparedStatement "org.datanucleus.store.rdbms.ParamLoggingPreparedStatement#37753b69"
2017-06-09 14:56:18.181 DEBUG 9492 --- [ main] DataNucleus.Persistence : Insert of object "com.bp.gis.tardis.entity.SymbolEntity#59c08cf1" is calling postInsert for field "com.bp.gis.tardis.entity.SymbolEntity.timeSeriesList"
2017-06-09 14:56:18.205 DEBUG 9492 --- [ main] DataNucleus.Persistence : Object "com.bp.gis.tardis.entity.SymbolEntity#59c08cf1" field "timeSeriesList" is replaced by a SCO wrapper of type "org.datanucleus.store.types.wrappers.backed.List" [cache-values=true, lazy-loading=true, allow-nulls=true]
2017-06-09 14:56:18.207 DEBUG 9492 --- [ main] DataNucleus.Persistence : ExecutionContext.internalFlush() process finished
2017-06-09 14:56:18.218 DEBUG 9492 --- [ main] o.s.jdbc.core.JdbcTemplate : Executing prepared SQL query
2017-06-09 14:56:18.220 DEBUG 9492 --- [ main] o.s.jdbc.core.JdbcTemplate : Executing prepared SQL statement [SELECT count(*) FROM symbol WHERE title = ?]
2017-06-09 14:56:18.250 TRACE 9492 --- [ main] o.s.jdbc.core.StatementCreatorUtils : Setting SQL statement parameter value: column index 1, parameter value [TEST.CODE.1], value class [java.lang.String], SQL type unknown
2017-06-09 14:57:18.298 INFO 9492 --- [ main] o.s.b.f.xml.XmlBeanDefinitionReader : Loading XML bean definitions from class path resource [org/springframework/jdbc/support/sql-error-codes.xml]
2017-06-09 14:57:18.390 INFO 9492 --- [ main] o.s.jdbc.support.SQLErrorCodesFactory : SQLErrorCodes loaded: [DB2, Derby, H2, HSQL, Informix, MS-SQL, MySQL, Oracle, PostgreSQL, Sybase, Hana]
MockHttpServletRequest:
HTTP Method = POST
Request URI = /symbols
Parameters = {}
Headers = {}
Handler:
Type = org.springframework.data.rest.webmvc.RepositoryEntityController
Method = public org.springframework.http.ResponseEntity<org.springframework.hateoas.ResourceSupport> org.springframework.data.rest.webmvc.RepositoryEntityController.postCollectionResource(org.springframework.data.rest.webmvc.RootResourceInformation,org.springframework.data.rest.webmvc.PersistentEntityResource,org.springframework.data.rest.webmvc.PersistentEntityResourceAssembler,java.lang.String) throws org.springframework.web.HttpRequestMethodNotSupportedException
Async:
Async started = false
Async result = null
Resolved Exception:
Type = null
ModelAndView:
View name = null
View = null
Model = null
FlashMap:
Attributes = null
MockHttpServletResponse:
Status = 201
Error message = null
Headers = {X-Application-Context=[application:-1], Location=[http://localhost/symbols/0]}
Content type = null
Body =
Forwarded URL = null
Redirected URL = http://localhost/symbols/0
Cookies = []
2017-06-09 14:57:18.424 DEBUG 9492 --- [ main] DataNucleus.Transaction : Transaction rolling back for ExecutionContext org.datanucleus.ExecutionContextImpl#2c47a053
2017-06-09 14:57:18.429 DEBUG 9492 --- [ main] DataNucleus.Lifecycle : Object "com.bp.gis.tardis.entity.SymbolEntity#59c08cf1" (id="com.bp.gis.tardis.entity.SymbolEntity:1") has a lifecycle change : "P_NEW"->""
2017-06-09 14:57:18.447 DEBUG 9492 --- [ main] DataNucleus.Transaction : Object "com.bp.gis.tardis.entity.SymbolEntity#59c08cf1" (id="com.bp.gis.tardis.entity.SymbolEntity:1") was evicted from transactional cache
2017-06-09 14:57:18.448 DEBUG 9492 --- [ main] DataNucleus.Persistence : Disconnecting com.bp.gis.tardis.entity.SymbolEntity#59c08cf1 from StateManager[pc=com.bp.gis.tardis.entity.SymbolEntity#59c08cf1, lifecycle=P_NEW]
2017-06-09 14:57:18.451 DEBUG 9492 --- [ main] DataNucleus.Cache : Object with id="com.bp.gis.tardis.entity.SymbolEntity:1" being removed from Level 1 cache [current cache size = 1]
2017-06-09 14:57:18.451 DEBUG 9492 --- [ main] DataNucleus.Transaction : Rolling back [DataNucleus Transaction, ID=Xid= , enlisted resources=[org.datanucleus.store.rdbms.ConnectionFactoryImpl$EmulatedXAResource#3d4b45b]]
2017-06-09 14:57:18.452 DEBUG 9492 --- [ main] DataNucleus.Connection : ManagedConnection(enlisted) "org.datanucleus.store.rdbms.ConnectionFactoryImpl$ManagedConnectionImpl#63a7af06 [conn=org.apache.derby.impl.jdbc.EmbedConnection#19d76106, commitOnRelease=false, closeOnRelease=false, closeOnTxnEnd=true]" rolling back for transaction "Xid= "
2017-06-09 14:57:18.461 DEBUG 9492 --- [ main] DataNucleus.Connection : ManagedConnection(non-enlisted) "org.datanucleus.store.rdbms.ConnectionFactoryImpl$ManagedConnectionImpl#63a7af06 [conn=org.apache.derby.impl.jdbc.EmbedConnection#19d76106, commitOnRelease=false, closeOnRelease=false, closeOnTxnEnd=true]" closed
2017-06-09 14:57:18.461 DEBUG 9492 --- [ main] DataNucleus.Connection : ManagedConnection removed from the pool : "org.datanucleus.store.rdbms.ConnectionFactoryImpl$ManagedConnectionImpl#63a7af06 [conn=org.apache.derby.impl.jdbc.EmbedConnection#19d76106, commitOnRelease=false, closeOnRelease=false, closeOnTxnEnd=true]" for key="org.datanucleus.ExecutionContextImpl#2c47a053" in factory="ConnectionFactory:tx[org.datanucleus.store.rdbms.ConnectionFactoryImpl#204c5ddf]"
2017-06-09 14:57:18.462 DEBUG 9492 --- [ main] DataNucleus.Transaction : Transaction rolled back in 38 ms
2017-06-09 14:57:18.462 DEBUG 9492 --- [ main] DataNucleus.Persistence : ExecutionContext "org.datanucleus.ExecutionContextImpl#2c47a053" closed
2017-06-09 14:57:18.463 INFO 9492 --- [ main] o.s.t.c.transaction.TransactionContext : Rolled back transaction for test context [DefaultTestContext#1f6f0fe2 testClass = SymbolRestTests, testInstance = com.bp.gis.tardis.integration.SymbolRestTests#22604c7e, testMethod = shouldCreateEntity#SymbolRestTests, testException = org.springframework.dao.CannotAcquireLockException: PreparedStatementCallback; SQL [SELECT count(*) FROM symbol WHERE title = ?]; A lock could not be obtained within the time requested; nested exception is java.sql.SQLTransactionRollbackException: A lock could not be obtained within the time requested, mergedContextConfiguration = [WebMergedContextConfiguration#3a48c398 testClass = SymbolRestTests, locations = '{}', classes = '{class com.bp.gis.tardis.config.TestDataSourceConfig, class com.bp.gis.tardis.config.TestDataSourceConfig}', contextInitializerClasses = '[]', activeProfiles = '{}', propertySourceLocations = '{}', propertySourceProperties = '{logging.level.DataNucleus=DEBUG, logging.level.com.bp.gis.tardis=TRACE, logging.level.org.springframework.jdbc.core=TRACE, security.basic.enabled=false, org.springframework.boot.test.context.SpringBootTestContextBootstrapper=true}', contextCustomizers = set[[ImportsContextCustomizer#1b4ba615 key = [#org.springframework.boot.autoconfigure.AutoConfigurationPackage(), #org.junit.FixMethodOrder(value=NAME_ASCENDING), #org.springframework.context.annotation.Import(value=[class org.springframework.boot.autoconfigure.AutoConfigurationPackages$Registrar]), #org.springframework.boot.test.autoconfigure.jdbc.AutoConfigureTestDatabase(replace=ANY, connection=DERBY), #org.springframework.boot.autoconfigure.EnableAutoConfiguration(exclude=[], excludeName=[]), #org.springframework.test.context.BootstrapWith(value=class org.springframework.boot.test.context.SpringBootTestContextBootstrapper), #org.junit.jupiter.api.extension.ExtendWith(value=[class org.springframework.test.context.junit.jupiter.SpringExtension]), #org.springframework.transaction.annotation.Transactional(propagation=REQUIRED, rollbackForClassName=[], readOnly=false, isolation=DEFAULT, transactionManager=, noRollbackFor=[], noRollbackForClassName=[], value=, timeout=-1, rollbackFor=[]), #org.springframework.boot.test.autoconfigure.web.servlet.AutoConfigureMockMvc(webDriverEnabled=true, print=DEFAULT, webClientEnabled=true, secure=true, addFilters=true, printOnlyOnFailure=true), #org.springframework.boot.autoconfigure.ImportAutoConfiguration(value=[], exclude=[], classes=[]), #org.junit.platform.commons.meta.API(value=Experimental), #org.springframework.context.annotation.Import(value=[class org.springframework.boot.autoconfigure.ImportAutoConfigurationImportSelector]), #org.springframework.boot.test.autoconfigure.properties.PropertyMapping(value=spring.test.mockmvc, skip=NO), #org.springframework.boot.test.context.SpringBootTest(webEnvironment=MOCK, value=[], properties=[logging.level.DataNucleus=DEBUG, logging.level.com.bp.gis.tardis=TRACE, logging.level.org.springframework.jdbc.core=TRACE, security.basic.enabled=false], classes=[class com.bp.gis.tardis.config.TestDataSourceConfig]), #org.springframework.boot.test.autoconfigure.properties.PropertyMapping(value=spring.test.database, skip=NO), #org.springframework.context.annotation.Import(value=[class org.springframework.boot.autoconfigure.EnableAutoConfigurationImportSelector])]], org.springframework.boot.test.context.SpringBootTestContextCustomizer#702657cc, org.springframework.boot.test.context.filter.ExcludeFilterContextCustomizer#6025e1b6, org.springframework.boot.test.mock.mockito.MockitoContextCustomizer#0, org.springframework.boot.test.autoconfigure.properties.PropertyMappingContextCustomizer#e30f6a3a, org.springframework.boot.test.autoconfigure.web.servlet.WebDriverContextCustomizerFactory$Customizer#1ff4931d], resourceBasePath = 'src/main/webapp', contextLoader = 'org.springframework.boot.test.context.SpringBootContextLoader', parent = [null]]].
UPDATE #3
The logging shows the INSERT by DataNucleus, followed several log statements that all look kosher about entity objects, and then comes
ExecutionContext.internalFlush() process finished
which sounds like the DataNucleus EntityManager flushing. Then comes the logging statement from Spring's JdbcTemplate which wants to read what JPA insert, and it all goes wrong.
Spring does in fact totally wrap the EntityManager for its testing framework and the wrapper just swallows the call to entityManager.close() so that call won't cause transactions to complete.
Spring also throws an error on calls to entityManager.getTransaction().
Typically in my experience of Spring, what just worked with the conventional Spring approach, e.g. Spring Data JPA with fully integrated Hibernate, does not work with DataNucleus.
Thanks go to this SO Q: How to manually force a commit in a #Transactional method?
I took out the #Transactional annotation from the class declaration, and put nothing on the test method, and called a seperate method with REQUIRES_NEW to do the REST-to-database functionality I want to test. Then in the original test method after that call, it was all committed and not locked so I could use Spring's JdbcTemplate to examine the result.
#Test
public void shouldCreateEntity() throws Exception {
String testTitle = "TEST.CODE.1";
String testExtra = "Test for SymbolRestTests.java";
String json = createJsonExample(testTitle, testExtra, true);
log.debug(String.format("JSON==%s", json));
doInNewTransaction(json);
String sql = "SELECT count(*) FROM symbol WHERE title = ?";
int count = jdbcTemplate.queryForObject(
sql, new Object[] { testTitle }, Integer.class);
Assert.assertThat(count, is(1));
}
#Transactional(propagation = Propagation.REQUIRES_NEW)
private void doInNewTransaction(String json) throws Exception {
MockHttpServletRequestBuilder requestBuilder =
post("/symbols").content(json);
mockMvc.perform(requestBuilder)
.andExpect(status().isCreated())
.andExpect(header().string("Location",
containsString("symbols/")));
}

Spring Batch ResultSet got closed by other before all data being fetched

I am trying to setup the DB2 source as the persistence for the Batch meta data. I am getting this stacktrace:
Caused by: org.springframework.jdbc.UncategorizedSQLException: PreparedStatementCallback; uncategorized SQLException for SQL [SELECT JOB_EXECUTION_ID, START_TIME, END_TIME, STATUS, EXIT_CODE, EXIT_MESSAGE, CREATE_TIME, LAST_UPDATED, VERSION, JOB_CONFIGURATION_LOCATION from rhall.BATCH_JOB_EXECUTION where JOB_INSTANCE_ID = ? order by JOB_EXECUTION_ID desc]; SQL state [null]; error code [-4470]; [jcc][t4][10120][10898][3.57.82] Invalid operation: result set is closed. ERRORCODE=-4470, SQLSTATE=null; nested exception is com.ibm.db2.jcc.am.SqlException: [jcc][t4][10120][10898][3.57.82] Invalid operation: result set is closed. ERRORCODE=-4470, SQLSTATE=null
at org.springframework.jdbc.support.AbstractFallbackSQLExceptionTranslator.translate(AbstractFallbackSQLExceptionTranslator.java:84)
at org.springframework.jdbc.support.AbstractFallbackSQLExceptionTranslator.translate(AbstractFallbackSQLExceptionTranslator.java:81)
at org.springframework.jdbc.support.AbstractFallbackSQLExceptionTranslator.translate(AbstractFallbackSQLExceptionTranslator.java:81)
at org.springframework.jdbc.core.JdbcTemplate.execute(JdbcTemplate.java:645)
at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:680)
at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:712)
at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:722)
at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:777)
at org.springframework.batch.core.repository.dao.JdbcJobExecutionDao.findJobExecutions(JdbcJobExecutionDao.java:131)
at org.springframework.batch.core.repository.support.SimpleJobRepository.getStepExecutionCount(SimpleJobRepository.java:253)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:60)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:37)
at java.lang.reflect.Method.invoke(Method.java:611)
at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:317)
at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
at org.springframework.transaction.interceptor.TransactionInterceptor$1.proceedWithInvocation(TransactionInterceptor.java:99)
at org.springframework.transaction.interceptor.TransactionAspectSupport.invokeWithinTransaction(TransactionAspectSupport.java:281)
at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:96)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:207)
at $Proxy32.getStepExecutionCount(Unknown Source)
at org.springframework.batch.core.job.flow.JobFlowExecutor.isStepRestart(JobFlowExecutor.java:82)
at org.springframework.batch.core.job.flow.JobFlowExecutor.executeStep(JobFlowExecutor.java:63)
at org.springframework.batch.core.job.flow.support.state.StepState.handle(StepState.java:67)
at org.springframework.batch.core.job.flow.support.SimpleFlow.resume(SimpleFlow.java:169) ... 22 more
Caused by: com.ibm.db2.jcc.am.SqlException: [jcc][t4][10120][10898][3.57.82] Invalid operation: result set is closed. ERRORCODE=-4470, SQLSTATE=null
at com.ibm.db2.jcc.am.bd.a(bd.java:660)
at com.ibm.db2.jcc.am.bd.a(bd.java:60)
at com.ibm.db2.jcc.am.bd.a(bd.java:103)
at com.ibm.db2.jcc.am.zl.Db(zl.java:4219)
at com.ibm.db2.jcc.am.zl.q(zl.java:4180)
at com.ibm.db2.jcc.am.zl.c(zl.java:1009)
at com.ibm.db2.jcc.am.zl.getTimestamp(zl.java:985)
at com.ibm.ws.rsadapter.jdbc.WSJdbcResultSet.getTimestamp(WSJdbcResultSet.java:2607)
at org.springframework.batch.core.repository.dao.JdbcJobExecutionDao$JobExecutionRowMapper.mapRow(JdbcJobExecutionDao.java:425)
at org.springframework.batch.core.repository.dao.JdbcJobExecutionDao$JobExecutionRowMapper.mapRow(JdbcJobExecutionDao.java:396)
at org.springframework.jdbc.core.RowMapperResultSetExtractor.extractData(RowMapperResultSetExtractor.java:93)
at org.springframework.jdbc.core.RowMapperResultSetExtractor.extractData(RowMapperResultSetExtractor.java:60)
at org.springframework.jdbc.core.JdbcTemplate$1.doInPreparedStatement(JdbcTemplate.java:693)
at org.springframework.jdbc.core.JdbcTemplate.execute(JdbcTemplate.java:629)
... 45 more
I trace the code, and found the problem around this method: JdbcJobExecutionDao.mapRow(ResultSet rs, int rowNum)
(I am using Spring-batch version 3.0.6) List paste the method here for your
convenience,
public JobExecution mapRow(ResultSet rs, int rowNum)
throws SQLException {
Long id = rs.getLong(1);
String jobConfigurationLocation = rs.getString(10);
JobExecution jobExecution;
if (jobParameters == null) {
jobParameters = getJobParameters(id);
}
if (jobInstance == null) {
jobExecution = new JobExecution(id, jobParameters, jobConfigurationLocation);
} else {
jobExecution = new JobExecution(jobInstance, id, jobParameters, jobConfigurationLocation);
}
jobExecution.setStartTime(rs.getTimestamp(2));
jobExecution.setEndTime(rs.getTimestamp(3));
jobExecution.setStatus(BatchStatus.valueOf(rs.getString(4)));
jobExecution.setExitStatus(new ExitStatus(rs.getString(5), rs.getString(6)));
jobExecution.setCreateTime(rs.getTimestamp(7));
jobExecution.setLastUpdated(rs.getTimestamp(8));
jobExecution.setVersion(rs.getInt(9));
return jobExecution;
}
As I trace it, I notice that the problem is in the getJobParameters(id) method. This method performs another query to the JOB_EXECUTION_PARAMS table for paramaters for the given job id. But within this method, the getConnection method returns the same connection as in the current context. After the query, the finally block closes the resultSet. So when the control gets back to the mapRow method, it failed at this line:
jobExecution.setStartTime(rs.getTimestamp(2));
It is because the rs has already been closed by the getJobParameters(id) method.
Wondering if I did wrong? Please point me out.
Many thanks.
removing #Transactional from my method that uses the Batch Infrastructure classes, ie, JobExplorer, solves this issues around the closed ResultSet.