How to automate a mongo db command? - mongodb

Since the sudo mongod command did not work for my macOS version (/ data/db path was not found), I changed the path to /System/Volumes/Data/data/db.
To start mongo I always have to enter sudo mongod --dbpath /System/Volumes/Data/data/db so that the new path is recognized.
Is there a way to design this process so that I only have to enter sudo mongod again?
I'm using the following macOS version: Catalina 10.15.3 with zsh

You should search for config file of MongoDB and check the content of:
storage:
dbPath: <string>
And dbPath must point to the /System/Volumes/Data/data/db
The usual location of config file is /usr/local/etc/mongod.conf

Related

mongodb directory is empty in WSL Ubuntu 20.04 installation of mogodb

I am able to start mongdb server using the following command:sudo mongod --dbpath ~/data/db.
However, with sudo service mongod start, the service fails to start.
I tried to check contents and permissions of the various mongo and mongodb directories created, but I find that ls -l /var/lib/mongodb/ is empty but I am not sure what that means.
What am I missing?
Edit:
I tried the following commands and it worked, which would mean that the dbpath was somehow not associated with the default path which made the sudo service mongod start to fail.
But how did the service automatically start when I provided the dbpath with sudo mongod --dbpath ~/data/db?
sudo mongod --repair --dbpath /var/lib/mongodb
sudo mongod --fork --logpath /var/lib/mongodb/mongodb.log --dbpath /var/lib/mongodb
sudo service mongod start```
mongod --dbpath /var/lib/mongodb starts the service and stores data in /var/lib/mongodb
mongod --dbpath ~/data/db starts the service and stores data in ~/data/db, where ~ is your home directory.
sudo mongod --dbpath ~/data/db starts the service and stores data in ~/data/db, where ~ is either your personal home directory the home directory of user root. Looks like some Linux derivatives preserve HOME variable whereas other do not when using sudo.
mongod starts the service and stores data in /data/db (or for Windows: \data\db on current drive)
service mongod start reads the service files (check with service mongod status) and uses the dbPath defined in there. Defaults are these:
Platform
Package Manager
Default storage.dbPath
RHEL / CentOS and Amazon
yum
/var/lib/mongo
SUSE
zypper
/var/lib/mongo
Ubuntu and Debian
apt
/var/lib/mongodb
macOS
brew
/usr/local/var/mongodb
Windows
MSI
C:\Program Files\MongoDB\Server\{release}\data\
So, it's your choice!

mongodb looking in wrong directory for data [duplicate]

I got an error about dbpath (/data/db/) does not exist, but /etc/mongodb.conf named it dbpath = /var/lib/mongodb.
So, which is the default dbpath for MongoDB?
The default dbpath for mongodb is /data/db.
There is no default config file, so you will either need to specify this when starting mongod with:
mongod --config /etc/mongodb.conf
.. or use a packaged install of MongoDB (such as for Redhat or Debian/Ubuntu) which will include a config file path in the service definition.
Note: to check the dbpath and command-line options for a running mongod, connect via the mongo shell and run:
db.serverCmdLineOpts()
In particular, if a custom dbpath is set it will be the value of:
db.serverCmdLineOpts().parsed.dbpath // MongoDB 2.4 and older
db.serverCmdLineOpts().parsed.storage.dbPath // MongoDB 2.6+
I have version 2.0.7 installed on Ubuntu and it defaulted to /var/lib/mongodb/ and that is also what was placed into my /etc/mongodb.conf file.
For a Windows machine start the mongod process by specifying the dbpath:
mongod --dbpath \mongodb\data
Reference: Manage mongod Processes
I depends on the version and the distro.
For example the default download pre-2.2 from the MongoDB site uses: /data/db but the Ubuntu install at one point used to use: var/lib/mongodb.
I think these have been standardised now so that 2.2+ will only use data/db whether it comes from direct download on the site or from the repos.
The dbPath in Mongo can be confusing. If you don't specify the dbPath at all (neither as command line parameter nor in mongod.conf file) then it defaults to
/data/db on Linux and macOS
\data\db on Windows (on current drive)
However, the default mongod.conf files which comes along the installation and which is used when you start mongod as a service (e.g. systemctl start mongod) uses these ones:
Platform
Package Manager
Default storage.dbPath
RHEL / CentOS and Amazon
yum
/var/lib/mongo
SUSE
zypper
/var/lib/mongo
Ubuntu and Debian
apt
/var/lib/mongodb
macOS
brew
/usr/local/var/mongodb
Windows
MSI
C:\Program Files\MongoDB\Server\{release}\data\
So, you must carefully check what you are using.
See Run-time Database Configuration
The Windows x64 installer shows the a path in the installer UI/wizard.
You can confirm which path it used later, by opening your mongod.cfg file. My mongod.cfg was located here C:\Program Files\MongoDB\Server\4.0\bin\mongod.cfg (change for your version of MongoDB!
When I opened my mongd.cfg I found this line, showing the default db path:
dbPath: C:\Program Files\MongoDB\Server\4.0\data
However, this caused an error when trying to run mongod, which was still expecting to find C:\data\db:
2019-05-05T09:32:36.084-0700 I STORAGE [initandlisten] exception in initAndListen: NonExistentPath: Data directory C:\data\db\ not found., terminating
You could pass mongod a --dbpath=... parameter. In my case:
mongod --dbpath="C:\Program Files\MongoDB\Server\4.0\data"

How to resolve MongoDB failing to instantiate [closed]

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I followed the MongoDb Docs to setup my first MongoDb,
When I start MongoDB using the command
C:\Program Files\MongoDB\Server\3.4\bin\mongod.exe
I get the following error
exception in initAndListen: 29 Data directory C:\data\db\ not found., terminating
shutdown: going to close listening sockets...
shutdown: going to flush diaglog...
now exiting
shutting down with code:100
MongoDB needs a folder to store the database. Create a C:\data\db\ directory:
mkdir C:\data\db
and then start MongoDB:
C:\Program Files\MongoDB\Server\3.4\bin\mongod.exe
Sometimes C:\data\db folder already exists due to previous installation. So if for this reason mongod.exe does not work, you may delete all the contents from C:\data\db folder and execute mongod.exeagain.
For macOS users to fix this issue:
You need to go through the following steps:
Create the “db” directory. This is where the Mongo data files will live. You can create the directory in the default location by running:
sudo mkdir -p /data/db
Make sure that the /data/db directory has the right permissions by running:
sudo chown -R `id -un` /data/db
You're all set now and you can run sudo mongod to start the Mongo server.
It's not working if you run only mongod
Source.
Same issue on my Mac (using Brew) solved using:
sudo mongod
For macOS users take care of below issue:
if you installing MongoDB Community on macOS using .tgz Tarball
((Starting with macOS 10.15 Catalina, Apple restricts access to the MongoDB default data directory of /data/db. On macOS 10.15 Catalina, you must use a different data directory, such as /usr/local/var/mongodb.))
you can solve it as the following:
(MacOS Catalina onwards)
Apple created a new Volume in Catalina for security purposes. If you’re on Catalina, you need to create the /data/db folder in System/Volumes/Data.
Use this command:
sudo mkdir -p /System/Volumes/Data/data/db
Then, use this command to give permissions:
sudo chown -R `id -un` /System/Volumes/Data/data/db
this will replace normal
sudo mkdir -p /data/db
Make sure that the /data/db directory has the right permissions by running:
sudo chown -R `id -un` /data/db
once you finish and start mongoDB you can use the following in terminal:
sudo mongod --dbpath /System/Volumes/Data/data/db
To change default db folder C:\data\db in windows, the command is:
--dbpath
For example:
\mongod --dbpath C:\myfolder
Mac Users
Instead of running MongoDB with:
sudo mongod
You can use mongod instead if you:
Locate the data folder of mongodb (usually ~/data)
Add permission to read + write with sudo chmod -R ugo+rw data
If you need to use sudo when running mongodb (sudo mongod), that means you don't have read and write permission on the mongodb data folder
Please take following steps:
As other friends mentioned, you should make a directory first for your database data to be stored. This folder could be something like:
C:\mongo-data
From command line navigate to where you have installed mongodb and where mongod.exe resides. In my case the full path is:
C:\Program Files\MongoDB\Server\3.4\bin
From here run mongod.exe and pass it the path to the folder you created in step one using the flag --dbpath as follows:
mongod.exe --dbpath "C:\mongo-data"
Please Note: If you are on windows it is necessary to use double-quotes ("") in the above to run properly.
In this way you will get something like the following:
2017-06-14T12:45:59.892+0430 I NETWORK [thread1] waiting for connections on port 27017
If you use single quotes (' ') on windows, you will get:
2017-06-14T01:13:45.965-0700 I CONTROL [initandlisten] shutting down with code:100
Hope it helps to resolve the issue.
To run Mongo DB demon with mongod command, you should have a database directory, probably you need to run:
mkdir C:\data\db
Also, MongoDB need to have a write permissions for that directory or it should be run with superuser permissions, like sudo mongod.
I kept getting the following error when I tried to start mongodb (on mac os).
"shutting down with code:100"
I was using the following command:
./mongod --dbpath=~/mongo-data
The fix for me was that I didn't need the "=" sign and this was causing the error. So I did
./mongod --dbpath ~/mongo-data
Just wanted to throw this out there because the error in no way specifies that this is the problem. I almost removed the contents of the ~/mongo-data directory to see if that helped. Glad I remembered that cli args sometimes do not use the "=" sign.
first you have to create data directory where MongoDB stores data. MongoDB’s default data directory path is the absolute path \data\db on the drive from which you start MongoDB.
if you have install in C:/ drive then you have to create data\db directory. for doing this
run command in cmd
C:\>mkdir data\db
To start MongoDB, run mongod.exe.
"C:\Program Files\MongoDB\Server\4.2\bin\mongod.exe" --dbpath="c:\data\db"
The --dbpath option points to your database directory.
Connect to MongoDB.
"C:\Program Files\MongoDB\Server\4.2\bin\mongo.exe"
to check all work good :
show dbs
1.If it shows error (shutting down
with code 100) that means it is not finding the desired
location of file.
1.a If its before macOS Catalina then create directory with
sudo mkdir -p /data/db and give permissions to use it
sudo chown -R id -un /data/db.
1.b if it macOS Catalina onwards then make
sudo mkdir -p /System/Volumes/data/db and give it
permissions
sudo chown -R id -un /System/Volumes/data/db.
2.Starting mongo db brew services run mongodb-community
3.Type mongod or mongod --dbpath /System/Volumes/Data/data/db
4.And if the mongod show error (shutting down with code 48) that
means the port is being already use so you can do two things
4.a Either you change the port of mongod by specifying port
number
mongod --dbpath /System/Volumes/Data/data/db —port 27018.
4.b Or You can kill the process at that port by finding
the process by
sudo lsof -i :27017
and then kill by command
kill -9
5.Repeat the step 2 and 3.
In MacOS:-
If you forgot to give the path of the previously created database while running the mongo server, the above error will appear.
sudo ./mongod --dbpath ../../mongo-data/
Reference
Note :- ./mongod && ../../mongo-data is relative path.
So you can avoid it by configuration in environment variable
Reference
For windows i've got same issue.
The fix was - i need to run command line as administrator.
if you already have the directory, check the dir permissions or try to restart mongo with sudo.
sudo brew services start mongodb
In my case, I got a similar error and it was happening because I had run mongod with the root user and that had created a log file only accessible by the root. I could fix this by changing the ownership from root to the user you normally run mongod from. The log file was in /var/lib/mongodb/journal/
I you are using Virtualbox check your VM.
docker-machine ssh
df -h
Look at dev/sda1 if you do not have any free space this may be due to a large number of images, or containers. you can remove them using "docker rm" and "docker rmi"
This exit code will also be given if you are changing MongoDB versions and the data directory is incompatible, such as with a downgrade. Move the old directory elsewhere, and create a new directory (as per the instructions given in other answers).
Aravind.
It happened with me too because I stopped the MongoDB by the Task Manager.
Creating the C:\data\db folder and starting the MongoDB at C:\Program Files\MongoDB\Server\3.4\bin\mongod.exe worked for me, as cespon suggested, but the MongoDB didn't show any of my Databases previously created.
Then, removing the C:\data\db folder and repairing the installation with the MongoDB installer, I recovered my data and started normally the MongoDB.
(I'm very new with MongoDB, but it helped me solve this problem and recover may previews data).
typed mongod and getting error
Errors:
exception in initAndListen: NonExistentPath: Data directory /data/db not found.,
terminating
shuts down with Code 100
Then try with (create data and db folder with all permission)
mongod --dbpath=/data
use new tab and type mongo.
>use dbs
If still you are facing prob
then you can check for mac catalina: (https://docs.mongodb.com/manual/tutorial/install-mongodb-on-os-x-tarball/)
for windows: https://docs.mongodb.com/manual/tutorial/install-mongodb-on-windows-unattended/

How to discover MongoDB's data directory? [duplicate]

I got an error about dbpath (/data/db/) does not exist, but /etc/mongodb.conf named it dbpath = /var/lib/mongodb.
So, which is the default dbpath for MongoDB?
The default dbpath for mongodb is /data/db.
There is no default config file, so you will either need to specify this when starting mongod with:
mongod --config /etc/mongodb.conf
.. or use a packaged install of MongoDB (such as for Redhat or Debian/Ubuntu) which will include a config file path in the service definition.
Note: to check the dbpath and command-line options for a running mongod, connect via the mongo shell and run:
db.serverCmdLineOpts()
In particular, if a custom dbpath is set it will be the value of:
db.serverCmdLineOpts().parsed.dbpath // MongoDB 2.4 and older
db.serverCmdLineOpts().parsed.storage.dbPath // MongoDB 2.6+
I have version 2.0.7 installed on Ubuntu and it defaulted to /var/lib/mongodb/ and that is also what was placed into my /etc/mongodb.conf file.
For a Windows machine start the mongod process by specifying the dbpath:
mongod --dbpath \mongodb\data
Reference: Manage mongod Processes
I depends on the version and the distro.
For example the default download pre-2.2 from the MongoDB site uses: /data/db but the Ubuntu install at one point used to use: var/lib/mongodb.
I think these have been standardised now so that 2.2+ will only use data/db whether it comes from direct download on the site or from the repos.
The dbPath in Mongo can be confusing. If you don't specify the dbPath at all (neither as command line parameter nor in mongod.conf file) then it defaults to
/data/db on Linux and macOS
\data\db on Windows (on current drive)
However, the default mongod.conf files which comes along the installation and which is used when you start mongod as a service (e.g. systemctl start mongod) uses these ones:
Platform
Package Manager
Default storage.dbPath
RHEL / CentOS and Amazon
yum
/var/lib/mongo
SUSE
zypper
/var/lib/mongo
Ubuntu and Debian
apt
/var/lib/mongodb
macOS
brew
/usr/local/var/mongodb
Windows
MSI
C:\Program Files\MongoDB\Server\{release}\data\
So, you must carefully check what you are using.
See Run-time Database Configuration
The Windows x64 installer shows the a path in the installer UI/wizard.
You can confirm which path it used later, by opening your mongod.cfg file. My mongod.cfg was located here C:\Program Files\MongoDB\Server\4.0\bin\mongod.cfg (change for your version of MongoDB!
When I opened my mongd.cfg I found this line, showing the default db path:
dbPath: C:\Program Files\MongoDB\Server\4.0\data
However, this caused an error when trying to run mongod, which was still expecting to find C:\data\db:
2019-05-05T09:32:36.084-0700 I STORAGE [initandlisten] exception in initAndListen: NonExistentPath: Data directory C:\data\db\ not found., terminating
You could pass mongod a --dbpath=... parameter. In my case:
mongod --dbpath="C:\Program Files\MongoDB\Server\4.0\data"

MongoDB on Ubuntu won't start as a service, nothing in the log

Am running MongoDB 2.2 on Ubuntu and if I run:
sudo mongod
I get an error that it can't find /data/db, which is not where the database is. In mongod.conf the database path is specified as the Ubuntu 10gen default /var/lib/mongodb which is where the db is located. Seems like mongod is not finding the conf file. So when I run:
sudo mongod -f /etc/mongodb.conf
The server starts up fine and output is logged to the log file: /var/log/mongodb/mongodb.log. All is happy. I can switch to another shell, log into mongo shell, see the databases and run queries.
So, I cancel out of that and try to run as a service:
> sudo status mongodb
mongodb stop/waiting
> sudo start mongodb
mongodb start/running, process 10468
Looks good so far, but the mongo server did not start. Running another:
> sudo status mongodb
mongodb stop/waiting
> mongo
MongoDB shell version: 2.2.0
connecting to: test
Sat Sep 1 19:07:43 Error: couldn't connect to server 127.0.0.1:27017 src/mongo/shell/mongo.js:91
exception: connect failed
"test" is not the correct database, and nothing appears in the log file.
I am at a loss as to what could be wrong. I checked the upstart scripts and they seem fine. /etc/init/mongodb.conf runs:
mongodb --exec /usr/bin/mongod -- --config /etc/mongodb.conf
OK, this all comes down to permissions, but let's take it step by step. When you run sudo mongod it does not load a config file at all, it literally starts with the compiled in defaults - port 27017, database path of /data/db etc. - that is why you got the error about not being able to find that folder. The "Ubuntu default" is only used when you point it at the config file (if you start using the service command, this is done for you behind the scenes).
Next you ran it like this:
sudo mongod -f /etc/mongodb.conf
If there weren't problems before, then there will be now - you have run the process, with your normal config (pointing at your usual dbpath and log) as the root user. That means that there are going to now be a number of files in that normal MongoDB folder with the user:group of root:root.
This will cause errors when you try to start it as a normal service again, because the mongodb user (which the service will attempt to run as) will not have permission to access those root:root files, and most notably, it will probably not be able to write to the log file to give you any information.
Therefore, to run it as a normal service, we need to fix those permissions. First, make sure MongoDB is not currently running as root, then:
cd /var/log/mongodb
sudo chown -R mongodb:mongodb .
cd /var/lib/mongodb
sudo chown -R mongodb:mongodb .
That should fix it up (assuming the user:group is mongodb:mongodb), though it's probably best to verify with an ls -al or similar to be sure. Once this is done you should be able to get the service to start successfully again.
First confirm that the mongodb user/group has permission to write to both the data directory and log file:
$ sudo chown -R mongodb:mongodb /var/lib/mongodb/.
$ sudo chown -R mongodb:mongodb /var/log/mongodb.log
Start up MongoDB as a Daemon (background process) using the following command:
$ mongod --fork --dbpath /var/lib/mongodb/ --smallfiles --logpath
/var/log/mongodb.log --logappend
To Shut Down MongoDB enter the Mongo CLI, access the admin and issue the shutdown command:
$ ./mongo
> use admin
> db.shutdownServer()
Ref: http://www.mongodb.org/display/DOCS/Starting+and+Stopping+Mongo
I too had the same problem. So I went to cd /var/lib/mongodb/ and deleted the mongod.lock file
Then it worked for me.
After checking all permission in the data, journal and log folders as suggested by #nelsonic, my problem was solved by giving permission to lock file in the /tmp folder
sudo chown mongod:mongod mongodb-27017.sock
I was running it as a AWS Amazon Linux instance.
I figured that out by executing as the mongod user as below, and then, researching the error code. It might be useful for other troubleshooting.
sudo -S -u mongod mongod -f /etc/mongod.conf
Just try this command:
sudo chown mongodb /tmp/mongodb-27017.sock
Nothing worked for me, then I've found that it was a permissions problem on /tmp directory:
sudo chmod 1777 /tmp
sudo chown root:root /tmp
None of the above answers worked for me. I finally figured it out by debugging the init script with:
sudo bash -x /etc/init.d/mongodb start
And seeing it was passing the wrong config path to mongod. I simply changed the line in /etc/init.d/mongodb from "CONF=/etc/mongodb.conf" to "CONF=/etc/mongod.conf". Version 2 uses the former, and installing version 3 added /etc/mongod.conf with the new format but apparently did not update the init script.
UPDATE: I now have a much stranger problem where the init script works, but only if I run it with "sudo bash -x /etc/init.d/mongodb start" and not with "sudo service mongodb start". Same thing for stop.
My mongodb was starting when launched from the command line as the mongod user, but not as a service with User=mongod.
After an hour checking permissions, definition of the service, sockets... it was SElinux !
In /etc/selinux/config I switched from enforcing to permissive and reboot. It is now ok.
After none of the above answers worked for me, deleting my log file brought Mongo back to life.
These days this error can occur if you've updated mongod and you are running and old database. Mongod will be using the wiredTiger engine by default and you'll have a mmapv1 database
edit the engine setting in /etc/mongod.conf
# engine: wiredTiger
engine: mmapv1
Careful - YAML is whitespace sensitive
journalctl/systemd won't see this problem. Check the mongod log in /var/log/mongodb/mongod.log
I presume you can convert the database with something like the steps outlined here
https://docs.mongodb.com/manual/tutorial/change-standalone-wiredtiger/