I'm both updating and installing packages/libaries, but are only able to use them through the Python3.6 console.
10:40 ~ $ pip3.6 install -U --user scikit-learn
Requirement already up-to-date: scikit-learn in ./.local/lib/python3.6/site-packages
Requirement already up-to-date: numpy>=1.11.0 in ./.local/lib/python3.6/site-packages (from scikit-learn)
Requirement already up-to-date: joblib>=0.11 in ./.local/lib/python3.6/site-packages (from scikit-learn)
Requirement already up-to-date: scipy>=0.17.0 in ./.local/lib/python3.6/site-packages (from scikit-learn)
When using pip install it fails with :
10:40 ~ $ pip install -U --user scikit-learn
Collecting scikit-learn
Using cached https://files.pythonhosted.org/packages/18/28/5a48b00599b476875415b97bdfdb3849bafb31183c1d785501dbc8a77aa2/scikit-learn-0.22.1.tar.gz
Complete output from command python setup.py egg_info:
Traceback (most recent call last):
File "<string>", line 1, in <module>
File "/tmp/pip-build-JYw8w1/scikit-learn/setup.py", line 47, in <module>
import sklearn
File "sklearn/__init__.py", line 81, in <module>
from . import __check_build # noqa: F401
File "sklearn/__check_build/__init__.py", line 46, in <module>
raise_build_error(e)
File "sklearn/__check_build/__init__.py", line 41, in raise_build_error
%s""" % (e, local_dir, ''.join(dir_content).strip(), msg))
ImportError: No module named _check_build
___________________________________________________________________________
Contents of sklearn/__check_build:
__init__.py _check_build.pyx __init__.pyc
setup.py
___________________________________________________________________________
It seems that scikit-learn has not been built correctly.
If you have installed scikit-learn from source, please do not forget
to build the package before using it: run `python setup.py install` or
`make` in the source directory.
It appears that you are importing a local scikit-learn source tree. For
this, you need to have an inplace install. Maybe you are in the source
directory and you need to try from another location.
----------------------------------------
Command "python setup.py egg_info" failed with error code 1 in /tmp/pip-build-JYw8w1/scikit-learn/
If you've installed a package using pip3.6, make sure that your kernel version for your notebook is 3.6 -- if it's (say) 3.7, then it won't work, because each version of Python has its own separate set of installed modules.
I imported the notebook, and forgot to change Kernel Python3.6. It was still on Python3. Changed notebook to 3.6, and the it used the updated libary's-
When you run pip on PythonAnywhere, outside virtual environment, it installs packages for python2. The latest version of scikit-learn to work with python2 is 0.20.4. So, install it with pip install scikit-learn==0.20.4
You tried to install 0.22.1 with python2.
Related
I have successfully installed Pillow:
chris#MBPvonChristoph sources % python3 -m pip install --upgrade Pillow
Collecting Pillow
Using cached Pillow-9.0.1-1-cp310-cp310-macosx_11_0_arm64.whl (2.7 MB)
Installing collected packages: Pillow
Successfully installed Pillow-9.0.1
but when i try to use it in pycharm got:
Traceback (most recent call last):
File "/Users/chris/PycharmProjects/pythonProject2/main.py", line 1, in
from PIL import Image
ModuleNotFoundError: No module named 'PIL'
or using in Blender i got:
ModuleNotFoundError: No module named 'PIL'
I am not a python lib installing pro...so obviously i made something wrong. But how do i fix that?
Maybe i have to say i am working on a M1 Macbook
looks like you may need to repoint your pycharm to your installed python interpreter.
go to command line and find out python interpreter path. On windows you can where python in your command line an it will give you where your python and packages are installed.. You could also activate python directly in command line and find paths from there. For example, open command line then;
python
press enter = activates python
within then you can do:
import sys
for x in sys.path: x
In pycharm make sure you point to path discovered from step 1 and select that to be your python interpreter within pycharm --- check out examples here https://www.jetbrains.com/help/pycharm/configuring-python-interpreter.html#add-existing-interpreter
Should work. Not sure about all the steps you took, but if you installed python with pycharm on top of your regular installation of python i would recommend :
finding all the paths from step 1
deleting python using system
checking if folders found from paths step still exist
if they do, delete those as well
start over just with one python installation
repoint to that in pycharm
first
pip uninstall PIL
after uninstall
python3 -m pip install --upgrade pip
python3 -m pip install --upgrade Pillow
or
brew install Pillow
While Installing Man in the Middle Framework (MITMf) i get an ImportError:No Module named capstone..
Although Capstone is already installed in my Kali Machine
I downloaded MITMf from https://github.com/byt3bl33d3r/MITMf
Heres what i get
root#kali:~/Desktop/MITMf# python mitmf.py --help
Traceback (most recent call last):
File "mitmf.py", line 36, in <module>
from plugins import *
File "/root/Desktop/MITMf/plugins/filepwn.py", line 72, in <module>
from libs.bdfactory import pebin
File "/root/Desktop/MITMf/libs/bdfactory/pebin.py", line 49, in <module>
from intel.intelCore import intelCore
File "/root/Desktop/MITMf/libs/bdfactory/intel/intelCore.py", line 38, in <module>
from capstone import *
ImportError: No module named capstone
root#kali:~/Desktop/MITMf# pip install capstone
Requirement already satisfied: capstone in /usr/lib/python3/dist-packages (3.0.5)
root#kali:~/Desktop/MITMf#
You need to install the python2.7 version of capstone. It looks like your python installation is a little weird. On Debian systems such as Kali, pip should be the installer for python2 packages and pip3 should be the installer for python3 packages.
From the pip man page:
On Debian, pip is the command to use when installing packages for Python 2, while pip3 is the command to use when installing packages for Python 3.
You probably should fix your pip installation by linking pip2 to pip. The way we do this is removing the pip binary and creating a symlink from pip2:
[k#box]$ sudo rm /usr/bin/pip
[k#box]$ sudo ln -s /usr/bin/pip2 /usr/bin/pip
Then you should be able to install the python2.7 version with pip
[k#box]$ pip install capstone
Explanation:
You have installed the python3.6 version of capstone. You can see in the output of your pip install command:
root#kali:~/Desktop/MITMf# pip install capstone
Requirement already satisfied: capstone in /usr/lib/python3/dist-packages (3.0.5)
If you look at the script mitmf.py, you will notice that the top line specifies python2.7
[k#box]$ head -n3 mitmf.py
#!/usr/bin/env python2.7
# Copyright (c) 2014-2016 Moxie Marlinspike, Marcello Salvati
I have followed the tutorial for installing Geodjango on my Ubuntu 14.04. I am using Django 1.10 and Python 3.5, postgres-9.6 and postgis 2.3.
I have checked here and here, but found no solution.
In a newly installed ubuntu 14.04 Virtual Machine, it worked.
But in my installation, when I tried making migrations, I got:
OSError: /usr/lib/libgdal.so.1: undefined symbol: sqlite3_column_table_name
Investigating a bit further, I tried simply:
from django.contrib.gis import gdal
And got:
Traceback (most recent call last):
File "<stdin>", line 1, in <module>
File "/home/pv/anaconda3/envs/dj110py35/lib/python3.5/site-packages/django/contrib/gis/gdal/__init__.py", line 49, in <module>
from django.contrib.gis.gdal.driver import Driver # NOQA
File "/home/pv/anaconda3/envs/dj110py35/lib/python3.5/site-packages/django/contrib/gis/gdal/driver.py", line 5, in <module>
from django.contrib.gis.gdal.prototypes import ds as vcapi, raster as rcapi
File "/home/pv/anaconda3/envs/dj110py35/lib/python3.5/site-packages/django/contrib/gis/gdal/prototypes/ds.py", line 9, in <module>
from django.contrib.gis.gdal.libgdal import GDAL_VERSION, lgdal
File "/home/pv/anaconda3/envs/dj110py35/lib/python3.5/site-packages/django/contrib/gis/gdal/libgdal.py", line 48, in <module>
lgdal = CDLL(lib_path)
File "/home/pv/anaconda3/envs/dj110py35/lib/python3.5/ctypes/__init__.py", line 347, in __init__
self._handle = _dlopen(self._name, mode)
OSError: /usr/lib/libgdal.so.1: undefined symbol: sqlite3_column_table_name
Is there any suggestions on how I could repair my setup?
UPDATE
It seems to be a problema with my conda environment. When I started using a pip virtualenv, the problem did not arise anymore. I am not answering the question, because I could not find the solution, only a workaround. But rebuilding the environment with pip virtualenv works.
In conda environment: conda install -c conda-forge gdal=2.2.1
In django settings.py:
GDAL_LIBRARY_PATH = '<HOME>/anaconda3/envs/<env_name>/lib/libgdal.so'
I was having this issue as well and the specifying
GDAL_LIBRARY_PATH = <HOME>/anaconda3/envs/<env_name>/lib/libgdal.so
(in project.settings or os.environ.setdefault) led to
libicui18n.so.56: cannot open shared object file: No such file or directory.
The fix that worked for me was to upgrade icu:
conda install -c conda-forge icu=58
Upgrading icu lead to some changes in other package versions as well (qt downgraded from 5.6.2-4 to 5.6.2-3, the rest upgraded).
I simply run under my conda environment:
conda install gdal
Guy de Carufel's solution did not work for me, though he pointed to a correct direction, thanks
Have you built SQLite from source? Then, you forgot to enable Column metadata. Recompile SQLite with
CFLAGS="-DSQLITE_ENABLE_COLUMN_METADATA=1" ./configure
make
sudo make install
Have fun using the cutting edge SQLite.
Reference - https://www.sqlite.org/compile.html#enable_column_metadata
I am having trouble running a virtualenv, and I keep getting this same error code: "setuptools pip wheel failed with error code 1"
I saw some pages talking about how this is a discrepancy between different versions of setuptools, but I've uninstalled and reinstalled virtualenv and setuptools in several versions to no results. Does anyone know what's happening here?
Roberts-MacBook-Air:script Rob$ virtualenv venv
New python executable in venv/bin/python
Installing setuptools, pip, wheel...
Complete output from command /Users/Rob/Seedstages/script/venv/bin/python -c "import sys, pip; sys...d\"] + sys.argv[1:]))" setuptools pip wheel:
Traceback (most recent call last):
File "<string>", line 1, in <module>
File "/Users/Rob/anaconda/lib/python2.7/site-packages/virtualenv_support/pip-7.1.2-py2.py3-none-any.whl/pip/__init__.py", line 13, in <module>
File "/Users/Rob/anaconda/lib/python2.7/site-packages/virtualenv_support/pip-7.1.2-py2.py3-none-any.whl/pip/utils/__init__.py", line 15, in <module>
File "/Users/Rob/anaconda/lib/python2.7/zipfile.py", line 6, in <module>
import io
File "/Users/Rob/anaconda/lib/python2.7/io.py", line 51, in <module>
import _io
ImportError: dlopen(/Users/Rob/Seedstages/script/venv/lib/python2.7/lib-dynload/_io.so, 2): Symbol not found: __PyErr_ReplaceException
Referenced from: /Users/Rob/Seedstages/script/venv/lib/python2.7/lib-dynload/_io.so
Expected in: dynamic lookup
----------------------------------------
...Installing setuptools, pip, wheel...done.
Traceback (most recent call last):
File "/Users/Rob/anaconda/bin/virtualenv", line 11, in <module>
sys.exit(main())
File "/Users/Rob/anaconda/lib/python2.7/site-packages/virtualenv.py", line 832, in main
symlink=options.symlink)
File "/Users/Rob/anaconda/lib/python2.7/site-packages/virtualenv.py", line 1004, in create_environment
install_wheel(to_install, py_executable, search_dirs)
File "/Users/Rob/anaconda/lib/python2.7/site-packages/virtualenv.py", line 969, in install_wheel
'PIP_NO_INDEX': '1'
File "/Users/Rob/anaconda/lib/python2.7/site-packages/virtualenv.py", line 910, in call_subprocess
% (cmd_desc, proc.returncode))
OSError: Command /Users/Rob/Seedstages/script/venv/bin/python -c "import sys, pip; sys...d\"] + sys.argv[1:]))" setuptools pip wheel failed with error code 1
Roberts-MacBook-Air:script Rob$
I would say that Anaconda causes the conflict, though to be more specific, it appears as if Anaconda's virtualenv is the problem. Running which virtualenv on my macbook (where I'm having the same problem) yields /Users/me/anaconda/bin/virtualenv while running it on the linux system I just tested this on yields /usr/local/bin/virtualenv.
So, on OS X, I downloaded virtualenv using /usr/local/bin/pip install virtualenv. This doesn't create a virtualenv binary (or it didn't for me) in the PATH folders, so I had to type this painfully long command:
sudo /usr/local/bin/python ... {the path to virtualenv.py in the system python's site-packages folder} new_env
And that did it. But that's ridiculous. No one wants to do that - even creating links would still be hacking it when you don't need to.
According to the ContinuumIO github page on this very subject, the virtualenv env and source /bin/activate commands are replaced with conda create -n env python=2.7 and source activate env.
Tested on my macbook (running Anaconda2 v4 on OS Yosemite) and it worked out.
I have tried pip install psycopg2 and following errors i got:
Error:
(ScrapeProj) C:\Users\e2sn7cy\Documents\GitHub\scraper>pip install psycopg2==2.5.4
Collecting psycopg2==2.5.4
Using cached psycopg2-2.5.4.tar.gz
Complete output from command python setup.py egg_info:
running egg_info
creating pip-egg-info\psycopg2.egg-info
writing pip-egg-info\psycopg2.egg-info\PKG-INFO
writing top-level names to pip-egg-info\psycopg2.egg-info\top_level.txt
writing dependency_links to pip-egg-info\psycopg2.egg-info\dependency_links.txt
writing manifest file 'pip-egg-info\psycopg2.egg-info\SOURCES.txt'
warning: manifest_maker: standard file '-c' not found
Error: pg_config executable not found.
Please add the directory containing pg_config to the PATH
or specify the full executable path with the option:
python setup.py build_ext --pg-config /path/to/pg_config build ...
or with the pg_config option in 'setup.cfg'.
----------------------------------------
Command "python setup.py egg_info" failed with error code 1 in c:\users\e2sn7cy\appdata\local\temp\pi
p-build-joij3x\psycopg2
Then I tried using easy_install by downloading the .exe file from Stickpole and I got following errors :
(ScrapeProj) C:\Users\e2sn7cy\Envs\ScrapeProj\Scripts>easy_install psycopg2-2.6.1.win-amd64-py2.7-pg9
.4.4-release.exe
Processing psycopg2-2.6.1.win-amd64-py2.7-pg9.4.4-release.exe
psycopg2.tests.test_module: module references __file__
psycopg2.tests.test_types_basic: module references __file__
creating 'c:\users\e2sn7cy\appdata\local\temp\easy_install-sa7asq\psycopg2-2.6.1-py2.7-win32.egg' and
adding 'c:\users\e2sn7cy\appdata\local\temp\easy_install-sa7asq\psycopg2-2.6.1-py2.7-win32.egg.tmp'
to it
creating c:\users\e2sn7cy\envs\scrapeproj\lib\site-packages\psycopg2-2.6.1-py2.7-win32.egg
Extracting psycopg2-2.6.1-py2.7-win32.egg to c:\users\e2sn7cy\envs\scrapeproj\lib\site-packages
Adding psycopg2 2.6.1 to easy-install.pth file
Installed c:\users\e2sn7cy\envs\scrapeproj\lib\site-packages\psycopg2-2.6.1-py2.7-win32.egg
Processing dependencies for psycopg2==2.6.1
Finished processing dependencies for psycopg2==2.6.1
But when I again tried to install through pip I am getting a new message that its already there :
(ScrapeProj) C:\Users\e2sn7cy\Envs\ScrapeProj>pip install psycopg2
Requirement already satisfied (use --upgrade to upgrade): psycopg2 in c:\users\e2sn7cy\envs\scrapepro
j\lib\site-packages\psycopg2-2.6.1-py2.7-win32.egg
Then I thought ok I should try to import and then I got this error:
(ScrapeProj) C:\Users\e2sn7cy\Envs\ScrapeProj>python
Python 2.7.10 (default, May 23 2015, 09:40:32) [MSC v.1500 32 bit (Intel)] on win32
Type "help", "copyright", "credits" or "license" for more information.
>>> import psycopg2
Traceback (most recent call last):
File "<stdin>", line 1, in <module>
File "C:\Users\e2sn7cy\Envs\ScrapeProj\lib\site-packages\psycopg2-2.6.1-py2.7-win32.egg\psycopg2\__
init__.py", line 50, in <module>
from psycopg2._psycopg import BINARY, NUMBER, STRING, DATETIME, ROWID
ImportError: DLL load failed: %1 is not a valid Win32 application.
Now I am not able to understand what to do. Thanks
Edit 1:
I have also added my PostgreSQL path to system path variables
path:C:\Program Files\PostgreSQL\9.4
path:C:\Program Files\PostgreSQL\9.4\bin
The correct answer was given by Craig Ringer, I am just adding this because I came to know that we should first check which version of 64 bit or 32bit Python installed on our system. If you have 32 bit version of Python and if you will try to install 64bit, then you will get the above error on importing.
For checking the version:
import platform
platform.architecture()
and you will get an output like this:
('32bit','WindowsPE')
Download the pre-packaged binary release of psycopg2 for Windows rather than compiling it yourself. It's a pain to compile on Windows. This is explained in the install documentation for psycopg2.
You might need to remove your half-installed attempts.
Choose the appropriate version from this page:
http://www.stickpeople.com/projects/python/win-psycopg/
Right click and select copy link address
Back at home, use easy_install <<Paste URL Here>>
Freeze your new requirements: pip freeze > requirements.txt
Now that psycopg is in PyPI (as of March 2017 it appears), just fire up a command prompt with administrator privileges and install like so:
python -m pip install -U pip
python -m pip install psycopg2
If you don't have pip installed, follow the instructions here to do that first:
https://stackoverflow.com/a/12476379/2540707
pip install psycopg2-binary
This worked for me
Step 1: Compilers Installation and configuration
https://wiki.python.org/moin/WindowsCompilers
Before do anything, install or upgrade the Setuptools Python package. It contain compatibility improvements and add automatic use of compilers:
pip install --upgrade setuptools
Step 2: Download and install PostgreSQL
Before you continue to install python packages inside you virtualenvs download postgres itself. It contains files that are needed when compiling the psycopg2 python package. Just use the PostgreSQL installer(version 10 for example).
Important: add the postgres C:\Program Files\PostgreSQL\10\bin folder to your path. It contains the .dll needed for psycopg2.
Step 3: Install psycopg2
pip install psycopg2
Tested on Windows 7 + python 3.7
The best/easiest way of installing packages (including this problematic psycopg2 ) for python on windows platform is to:
1) install anaconda and ...
2) use Anaconda Navigator GUI to install/update packages.
By this one avoids many inconsistencies and conflicts that occurs among different packages versions and installations.