java.io.EOFException: null while running Postgres via docker-compose - postgresql

I'm new to docker-compose, wanted to run a container with Postgres db in it. For this I've created a docker-compose.yml with the following content:
services:
postgresql:
image: postgres
container_name: postgres_db
ports:
- "5433:5433"
environment:
- POSTGRES_PASSWORD=admin
- POSTGRES_USER=postgres
- POSTGRES_DB=testdb
So far I didn't pack my Spring Boot app in a container as well, as I'd like to do it step by step and for now run only the database in container.
I start it with
docker-compose -f docker-compose.yml up, then I run my app in Intellij and see that in logs:
org.postgresql.util.PSQLException: The connection attempt failed.
Caused by: java.io.EOFException: null
Via
docker-exec I was able to connect to my testdb. However, in Intellij I can't do the same via Database tool, I keep getting authentication error (username/password are wrong).
I'm struggling with these new concepts. What am I missing here?

Related

How do I secure and connect to mongodb in a container?

I am trying to secure a mongoDB docker container and am stumped by the authentication.
So far, in my docker compose file, I am setting root environment variables, but I am unable to connect to the mongoDB from outside of the container. Without setting auth, I have no such issues.
services:
mongodb:
image: mongo:latest
restart: always
ports:
- "27017:27017"
command: ["--auth"]
environment:
- MONGO_INITDB_ROOT_USERNAME=root
- MONGO_INITDB_ROOT_PASSWORD=root
I've tried to connect to mongodb://root:root#localhost:27017 using MongoDB Compass tool, but I keep getting authentication errors.
I am assuming that the root user is already created since I am getting authentication errors. I have tried using a script to create a user, but still I could not connect.
Try without command: ["--auth"]
Environment variables that you have provided should already turn this option on. Let me know, if that works.

Postgres running via docker not persisting data after initialization script

I'm using docker for the first time to set up a test database that my team can then use. I'm having some trouble getting my data on DBeaver after running my docker-compose file. The issue I'm facing is that my database does not show up in DBeaver (along with relevant Schemas and Tables that I also create/populate in my initialization sql script).
Here is my docker-compose.yml
version: "3"
services:
test_database:
image: postgres:latest
build:
context: ./
dockerfile: Dockerfile
restart: always
ports:
- 5432:5432
environment:
- POSTGRES_USER=dev
- POSTGRES_PASSWORD=test1234
- POSTGRES_DB=testdb
container_name: test_database
In this, I specify the docker file I want it to use for building. Here is the dockerfile:
# syntax = docker/dockerfile:1.3
FROM postgres:latest
ADD test_data.tar .
COPY init_test_db.sql /docker-entrypoint-initdb.d/
Now, when I run docker-compose build and docker-compose up, I can see through the logs that my SQL commands (CREATE, COPY, etc.) do get executed and the rows do get added. But when I connect to this instance through DBeaver, I can't see this at all. In fact, the only database on there is the default Postgres database, even through the logs say I'm connected to test_database.
I followed some other solutions and used docker volume prune as well, but that didn't affect anything (I read some solutions about clearing up volumes, and at that point, I had volumes: /tmp:/tmp as well). Any ideas?
Wow, this wasn't an error after all. All I had to do was go on the connection settings on DBeaver and check 'Show all databases' under the Postgres tab. Hope this can help someone :)

Can't connect with docker-compose to Postgres database

I'm trying to build a docker-compose file that will spin up my EF Core web api project, connecting to my Postgres database.
I'm having a hard time getting the EF project connecting to the database.
This is what I currently have for my docker-compose.yml:
version: '3.8'
services:
web:
container_name: 'mybackendcontainer'
image: 'myuser/mybackend:0.0.6'
build:
context: .
dockerfile: backend.dockerfile
ports:
- 8080:80
depends_on:
- postgres
networks:
- mybackend-network
postgres:
container_name: 'postgres'
image: 'postgres:latest'
environment:
- POSTGRES_USER=username
- POSTGRES_PASSWORD=MySuperSecurePassword!
- POSTGRES_DB=MyDatabase
networks:
- mybackend-network
expose:
- 5432
volumes:
- ./db-data/:/var/lib/postgresql/data/
pgadmin:
image: dpage/pgadmin4
ports:
- 15433:80
env_file:
- .env
depends_on:
- postgres
networks:
- mybackend-network
volumes:
- ./pgadmin-data/:/var/lib/pgadmin/
networks:
mybackend-network:
driver: bridge
And my web project docker file looks like this:
# Get base DSK Image from Microsoft
FROM mcr.microsoft.com/dotnet/sdk:6.0 AS build-env
WORKDIR /app
# Copy the CSPROJ file and restore any dependencies (via NUGET)
COPY *.csproj ./
RUN dotnet restore
# Copy the project files and build our release
COPY . ./
RUN dotnet publish -c Release -o out
# Generate runtime image - do not include the whole SDK to save image space
FROM mcr.microsoft.com/dotnet/aspnet:6.0
WORKDIR /app
EXPOSE 80
COPY --from=build-env /app/out .
ENTRYPOINT ["dotnet", "MyBackend.dll"]
And my connection string looks like this:
User ID =bootcampdb;Password=MySuperSecurePassword!;Server=postgres;Port=5432;Database=MyDatabase; Integrated Security=true;Pooling=true;
Currently I have two problems:
I'm getting Npgsql.PostgresException (0x80004005): 57P03: the database system is starting up when I do docker-compose -up. I tried to add the healthcheck to my postgress db but that did not work. When I go to my Docker desktop app, and start my backend again, that message goes away and I get my second problem...
Secondly after the DB started it's saying: FATAL: password authentication failed for user "username". It looks like it's not creating my user for the database. I even changed not to use .env files but have the value in my docker-compose file, but its still not working. I've tried to do docker-compose down -v to ensure my volumes gets deleted.
Sorry these might be silly questions, I'm still new to containerization and trying to get this to work.
Any help will be appreciated!
Problem 1: Having depends_on only means that docker-compose will wait until your postgres container is started before it starts the web container. The postgres container needs some time to get ready to accept connections and if you attempt to connect before it's ready, you get the error you're seeing. You need to code your backend in a way that it'll wait until Postgres is ready by retrying the connection with a delay.
Problem 2: Postgres only creates the user and database if no database already exists. You probably have an existing database in ./db-data/ on the host. Try deleting ./db-data/ and Postgres should create the user and database using the environment variables you've set.

Postgresql version in docker container is not compatible with its data

Mac OS 10.13.6
docker 9.03.5, build 633a0ea
I create two docker containers, web and db using docker-compose.yml. It worked for several months. Recently I decided to rebuild containers from scratch, so I actually removed the existing ones and started over:
$ docker-compose -f docker-compose-dev.yml build --no-cache
$ docker-compose -f docker-compose-dev.yml up -d
Duiring the "build" run, building db container yields this:
DETAIL: The data directory was initialised by PostgreSQL version 9.6,
which is not compatible with this version 11.2.
exited with code 1
The db container does not start so I can not check what it's got inside.
My containers
are defined like this:
version: '3'
services:
web:
restart: unless-stopped
container_name: web
build:
context: .
dockerfile: Dockerfile.dev
ports:
- "8000:8000"
environment:
DJANGO_SETTINGS_MODULE: '<my_app>.settings.postgres'
DB_NAME: 'my_db'
DB_USER: 'my_db_user'
DB_PASS: 'my_db_user'
DB_HOST: 'my_db_host'
PRODUCTION: 'false'
DEBUG: 'True'
depends_on:
- db
volumes:
- ./:/usr/src/app/
db:
image: postgres:11.2-alpine
volumes:
- myapp-db-dev:/var/lib/postgresql/data
environment:
- POSTGRES_DB=<my_db>
- POSTGRES_USER=<my_db_user>
- POSTGRES_PASSWORD=<my_db_password>
volumes:
myapp-db-dev:
My local postgresql is 11.3 (which should be irrelevant):
$ psql --version
psql (PostgreSQL) 11.3
and my local postgresql data directory was removed completely
$ rm -rf /usr/local/var/postgres
However, it's up-to-date:
$ brew postgresql-upgrade-database
Error: postgresql data already upgraded!
I read Stack Overflow 17822974 and Stack Overflow 19076980, those advices did not help.
How to fix this data incompatibility? If possible, I would like to avoid downgrading postgres. I don't even get what data it's talking about at that point, all the data is migrated later in a separate step.
It seems like on the first run Postgres 9.6 was specified as an image. So, the container was initialized and the data was put to the myapp-db-dev named volume. Then someone changed the version and you've got the error. The possible solution would be:
Temporary downgrade the version to the Postgres 9.6, e.g. specify postgres:9.6.
Go to the container and dump the data with pg_dump utility.
Change version to 11.2 and specify new volume (it's a good advice to use host volume).
Restore the data.

Migrating Ruby on Rails application to Docker: Issues with Docker-Compose

I'm new to creating my own docker images. I've been following along with this guide. I've successfully built my by using docker-compose build in the root directory.
However, I encounter the same issue every time I try to run: docker-compose up
I get the following error:
Pulling postgresql (postgresql:latest)...
ERROR: pull access denied for postgresql, repository does not exist or may require 'docker login'
I've setup a docker account. I can run a postgresql image using the documentation.
I'm at a loss as to what to do. I'm thinking I should modify my Dockerfile for my project or the docker-compose.yml file, but I'm unsure.
Also, when I build my app, I get the following at the beginning:
postgresql uses an image, skipping
My docker-compose.yml file looks like:
web:
build: .
command: rails s -e production
ports:
- 3000
links:
- postgresql
- postgresql:postgresql.cloud66.local
environment:
- RAILS_ENV=production
- RACK_ENV=production
postgresql:
image: postgresql
You may be running an outdated version of docker-compose.0
Also, your YAML seems to have an indentation error:
web:
build: .
links:
- postgresql
postgresql:
image: postgresql
This should be:
web:
build: .
links:
- postgresql
postgresql:
image: postgresql
Maybe it was just a copy & paste error, because the error message implies it was parsed correctly.