Perl Libraries configuration, conflicts - perl

Question

I'm having troubles with Perl in my server machine I'm not an admin, but I assume I have created my environment, it was working just fine until I installed Conda.
I install Perl using brew so it can help me to configure his libraries.
brew info perl
perl: stable 5.32.0, HEAD
Highly capable, feature-rich programming language
https://www.perl.org/
/lustre/mnad/.linuxbrew/Cellar/perl/5.32.0
If I called cpan Don't work return error below:
ListUtil.c: loadable library and perl binaries are mismatched (got handshake key 0xcd00080, needed 0xed00080)
unless I unset PERL5LIB env or export it to Perl in the brew
env | grep PERL
PERL5LIB=/lustre/mnad/.linuxbrew/Cellar/perl/5.32.0/lib/perl5/5.32.0:
PERL_MB_OPT=--install_base "/lustre/mnad/perl5"
PERL_LOCAL_LIB_ROOT=:/lustre/mnad/perl5
PERL_MM_OPT=INSTALL_BASE=/lustre/mnad/perl5
when I make I run for any Perl script an error occurs:
Can't locate local/lib.pm in #INC (you may need to install the local::lib module) (#INC contains: /lustre....
Can't locate Text/Soundex.pm in #INC (you may need to install the Text::Soundex module) ....
then I tried to
cpan[1]> install local::lib
Reading '/lustre/mnad/.cpan/Metadata'
Database was generated on Tue, 14 Jul 2020 02:17:04 GMT
Running install for module 'local::lib'
Checksum for /lustre/mnad/.cpan/sources/authors/id/H/HA/HAARG/local-lib-2.000024.tar.gz ok
Scanning cache /lustre/mnad/.cpan/build for sizes
............................................................................DONE
'YAML' not installed, will not store persistent state
Configuring H/HA/HAARG/local-lib-2.000024.tar.gz with Makefile.PL
Checking if your kit is complete...
Looks good
Generating a Unix-style Makefile
Writing Makefile for local::lib
Writing MYMETA.yml and MYMETA.json
HAARG/local-lib-2.000024.tar.gz
/lustre/mnad/.linuxbrew/Cellar/perl/5.32.0/bin/perl Makefile.PL -- OK
Running make for H/HA/HAARG/local-lib-2.000024.tar.gz
cp lib/local/lib.pm blib/lib/local/lib.pm
cp lib/POD2/PT_BR/local/lib.pod blib/lib/POD2/PT_BR/local/lib.pod
cp lib/lib/core/only.pm blib/lib/lib/core/only.pm
cp lib/POD2/DE/local/lib.pod blib/lib/POD2/DE/local/lib.pod
Manifying 4 pod documents
HAARG/local-lib-2.000024.tar.gz
/usr/bin/make -- OK
The current configuration of allow_installing_outdated_dists is 'ask/yes', but for this option we would need 'CPAN::DistnameInfo' installed. Please install 'CPAN::DistnameInfo' as soon as possible. As long as we are not equipped with 'CPAN::DistnameInfo' this option does not take effect
Running make test for HAARG/local-lib-2.000024.tar.gz
PERL_DL_NONLAZY=1 "/lustre/mnad/.linuxbrew/Cellar/perl/5.32.0/bin/perl" "-MExtUtils::Command::MM" "-MTest::Harness" "-e" "undef *Test::Harness::Switches; test_harness(0, 'blib/lib', 'blib/arch')" t/*.t
t/bad_variables.t ...... ok
t/carp-mismatch.t ...... ok
t/classmethod.t ........ ok
t/de-dup.t ............. ok
t/lib-core-only.t ...... ok
t/pipeline.t ........... ok
t/shell.t .............. ok
t/stackable.t .......... ok
t/subroutine-in-inc.t .. ok
t/taint-mode.t ......... ok
All tests successful.
Files=10, Tests=220, 7 wallclock secs ( 0.08 usr 0.03 sys + 2.68 cusr 2.53 csys = 5.32 CPU)
Result: PASS
Terminal does not support GetHistory.
Lockfile removed.
HAARG/local-lib-2.000024.tar.gz
/usr/bin/make test -- OK
Running make install for HAARG/local-lib-2.000024.tar.gz
Manifying 4 pod documents
Appending installation info to /lustre/mnad/perl5/lib/perl5/x86_64-linux-thread-multi/perllocal.pod
HAARG/local-lib-2.000024.tar.gz
/usr/bin/make install -- OK
and
cpan[2]> install Text::Soundex
Running install for module 'Text::Soundex'
Checksum for /lustre/mnad/.cpan/sources/authors/id/R/RJ/RJBS/Text-Soundex-3.05.tar.gz ok
Configuring R/RJ/RJBS/Text-Soundex-3.05.tar.gz with Makefile.PL
The XS code will be compiled.
Checking if your kit is complete...
Looks good
Generating a Unix-style Makefile
Writing Makefile for Text::Soundex
Writing MYMETA.yml and MYMETA.json
RJBS/Text-Soundex-3.05.tar.gz
/lustre/mnad/.linuxbrew/Cellar/perl/5.32.0/bin/perl Makefile.PL -- OK
Running make for R/RJ/RJBS/Text-Soundex-3.05.tar.gz
cp Soundex.pm blib/lib/Text/Soundex.pm
Running Mkbootstrap for Soundex ()
chmod 644 "Soundex.bs"
"/lustre/mnad/.linuxbrew/Cellar/perl/5.32.0/bin/perl" -MExtUtils::Command::MM -e 'cp_nonempty' -- Soundex.bs blib/arch/auto/Text/Soundex/Soundex.bs 644
"/lustre/mnad/.linuxbrew/Cellar/perl/5.32.0/bin/perl" "/lustre/mnad/.linuxbrew/Cellar/perl/5.32.0/lib/perl5/5.32.0/ExtUtils/xsubpp" -typemap '/lustre/mnad/.linuxbrew/Cellar/perl/5.32.0/lib/perl5/5.32.0/ExtUtils/typemap' Soundex.xs > Soundex.xsc
mv Soundex.xsc Soundex.c
cc -c -D_REENTRANT -D_GNU_SOURCE -fwrapv -fno-strict-aliasing -pipe -fstack-protector-strong -I/lustre/mnad/.linuxbrew/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -O2 -DVERSION=\"3.05\" -DXS_VERSION=\"3.05\" -fPIC "-I/lustre/mnad/.linuxbrew/Cellar/perl/5.32.0/lib/perl5/5.32.0/x86_64-linux-thread-multi/CORE" Soundex.c
rm -f blib/arch/auto/Text/Soundex/Soundex.so
cc -shared -O2 -L/usr/local/lib -fstack-protector-strong Soundex.o -o blib/arch/auto/Text/Soundex/Soundex.so \
\
chmod 755 blib/arch/auto/Text/Soundex/Soundex.so
Manifying 1 pod document
RJBS/Text-Soundex-3.05.tar.gz
/usr/bin/make -- OK
The current configuration of allow_installing_outdated_dists is 'ask/yes', but for this option we would need 'CPAN::DistnameInfo' installed. Please install 'CPAN::DistnameInfo' as soon as possible. As long as we are not equipped with 'CPAN::DistnameInfo' this option does not take effect
Running make test for RJBS/Text-Soundex-3.05.tar.gz
"/lustre/mnad/.linuxbrew/Cellar/perl/5.32.0/bin/perl" -MExtUtils::Command::MM -e 'cp_nonempty' -- Soundex.bs blib/arch/auto/Text/Soundex/Soundex.bs 644
PERL_DL_NONLAZY=1 "/lustre/mnad/.linuxbrew/Cellar/perl/5.32.0/bin/perl" "-MExtUtils::Command::MM" "-MTest::Harness" "-e" "undef *Test::Harness::Switches; test_harness(0, 'blib/lib', 'blib/arch')" t/*.t
t/basic.t .. ok
All tests successful.
Files=1, Tests=18, 0 wallclock secs ( 0.03 usr 0.01 sys + 0.01 cusr 0.02 csys = 0.07 CPU)
Result: PASS
RJBS/Text-Soundex-3.05.tar.gz
/usr/bin/make test -- OK
Running make install for RJBS/Text-Soundex-3.05.tar.gz
"/lustre/mnad/.linuxbrew/Cellar/perl/5.32.0/bin/perl" -MExtUtils::Command::MM -e 'cp_nonempty' -- Soundex.bs blib/arch/auto/Text/Soundex/Soundex.bs 644
Manifying 1 pod document
Files found in blib/arch: installing files in blib/lib into architecture dependent library tree
Appending installation info to /lustre/mnad/perl5/lib/perl5/x86_64-`linux-thread`-multi/perllocal.pod
RJBS/Text-Soundex-3.05.tar.gz
/usr/bin/make install -- OK
Both are installed but when I rerun the Perl tool similar error occurs:
Can't locate local/lib.pm in #INC (you may need to install the local::lib module) (#INC contains: /lustre/mnad/.linuxbrew/Cellar/perl/5.32.0/lib/perl5/5.32.0/x86_64-linux-thread-multi /lustre/mnad/.linuxbrew/Cellar/perl/5.32.0/lib/perl5/5.32.0 /lustre/mnad/.linuxbrew/Cellar/perl/5.32.0/lib/perl5/site_perl/5.32.0/x86_64-linux-thread-multi /lustre/mnad/.linuxbrew/Cellar/perl/5.32.0/lib/perl5/site_perl/5.32.0 /lustre/mnad/.linuxbrew/Cellar/perl/5.32.0/lib/perl5/5.32.0/x86_64-linux-thread-multi /lustre/mnad/.linuxbrew/Cellar/perl/5.32.0/lib/perl5/5.32.0 /lustre/mnad/.linuxbrew/lib/perl5/site_perl/5.32.0/x86_64-linux-thread-multi /lustre/mnad/.linuxbrew/lib/perl5/site_perl/5.32.0).
BEGIN failed--compilation aborted.
Can't locate Text/Soundex.pm in #INC (you may need to install the Text::Soundex module) (#INC contains: /lustre/mnad/Tools/RM /lustre/mnad/.linuxbrew/Cellar/perl/5.32.0/lib/perl5/5.32.0/x86_64-linux-thread-multi /lustre/mnad/.linuxbrew/Cellar/perl/5.32.0/lib/perl5/5.32.0 /lustre/mnad/.linuxbrew/Cellar/perl/5.32.0/lib/perl5/site_perl/5.32.0/x86_64-linux-thread-multi /lustre/mnad/.linuxbrew/Cellar/perl/5.32.0/lib/perl5/site_perl/5.32.0 /lustre/mnad/.linuxbrew/lib/perl5/site_perl/5.32.0/x86_64-linux-thread-multi /lustre/mnad/.linuxbrew/lib/perl5/site_perl/5.32.0) at /lustre/mnad/Tools/RM/Taxonomy.pm line 80.
BEGIN failed--compilation aborted at /lustre/mnad/Tools/RM/Taxonomy.pm line 80.
Compilation failed in require at ./RepeatMasker line 332.
BEGIN failed--compilation aborted at ./RepeatMasker line 332.
/usr/bin/perl: symbol lookup error: /lustre/mnad/.linuxbrew/Cellar/perl/5.32.0/lib/perl5/5.32.0/x86_64-linux-thread-multi/auto/Socket/Socket.so: undefined symbol: Perl_xs_handshake
Someone help my struggle, please.
which Perl
perl is /lustre/mnad/.linuxbrew/bin/perl
perl is /lustre/mnad/.linuxbrew/bin/perl
perl is /usr/bin/perl
perl --version
This is perl 5, version 32, subversion 0 (v5.32.0) built for x86_64-linux-thread-multi
cpan -v
ListUtil.c: loadable library and perl binaries are mismatched (got handshake key 0xcd00080, needed 0xed00080)
which cpan
cpan is /lustre/mnad/.linuxbrew/bin/cpan
cpan is /lustre/mnad/.linuxbrew/bin/cpan
cpan is /lustre/mnad/perl5/bin/cpan
cpan is /usr/bin/cpan

Answer 1

This line able to solve it and Cpan start to work, But I still I don't have clear picture.
cd /lustre/mnad && mv perl5 perl5.old