I know the same question already exists here, but regarding Windows and no vitual-env.
I run ubuntu 20.04 with python3-venv and python 3.8.
In python3 command line I can import psycopg2 and connect to a database.
Only VS code gives me an import error on psycopg2.
python 3.8.10 (default, Jun 2 2021, 10:49:15)
[GCC 9.4.0] on linux
Type "help", "copyright", "credits" or "license" for more information.
>>> import psycopg2
>>>
How can I solve this?
Thanks for your help.
I just found the reason.
I did a
pip3 freeze > requirements.txt
git add *; git commit -m "savepoint"; git push
and commited all to my git repository. After that I deleted the whole project directory.
Then I created a new venv project and cloned the previously saved git repository.
pip3 install -r requirements.txt
did install all necessary python modules including psycopg2.
After that VS code could import psycopg2.
I think this was an issue with wrong dependenties in venv cache.
Related
I've placed package dependencies (wheels) of a Kedro project into a <project-root>/deps/*.whl directory. I'm using a venv installed into <project-root>/.venv and manage it using Poetry.
Packages are referenced in pyproject.toml like this (here e.g. local-package):
[tool.poetry.dependencies]
local-package = {path = "deps/local_package-X.Y.Z-py2.py3-none-any.whl"}
The package can be imported in a REPL session:
$ .venv/bin/python
Python 3.8.2 (default, Apr 27 2020, 15:53:34)
[GCC 9.3.0] on linux
Type "help", "copyright", "credits" or "license" for more information.
>>> import local_package
>>>
In VSCode I've activated my venv and am running `kedro jupyter lab` to start jupyter lab. If I try to import the package it cannot be found (running `import local_package` in a notebook cell leads to `ModuleNotFoundError: No module named "local_package"`). If I run `!poetry show | grep local-package` in a notebook cell I get `local-package X.Y.Z deps/local_package-X.Y.Z-py2.py3-none-any.whl`. The Python interpreter shown in Jupyter Lab is the project one. What do I have to do to get this working?
The version of my Python is 2.7.13.
I run the following in Jupyter Notebook.
Firstly, I installed the packages
%%bash
pip uninstall -y google-cloud-dataflow
pip install --upgrade --force tensorflow_transform==0.15.0 apache-beam[gcp]
Then,
%%bash
pip freeze | grep -e 'flow\|beam'
I can see that the package tensorflow-transform is installed.
apache-beam==2.19.0
tensorflow==2.1.0
tensorflow-datasets==1.2.0
tensorflow-estimator==2.1.0
tensorflow-hub==0.6.0
tensorflow-io==0.8.1
tensorflow-metadata==0.15.2
tensorflow-probability==0.8.0
tensorflow-serving-api==2.1.0
tensorflow-transform==0.15.0
However when I tried to import it, there are warning and error.
WARNING:tensorflow:From /usr/local/lib/python2.7/dist-packages/tensorflow_estimator/python/estimator/api/_v1/estimator/__init__.py:12: The name tf.estimator.inputs is deprecated. Please use tf.compat.v1.estimator.inputs instead.
ImportErrorTraceback (most recent call last)
<ipython-input-3-26a4792d0a76> in <module>()
1 import tensorflow as tf
----> 2 import tensorflow_transform as tft
3 import shutil
4 print(tf.__version__)
ImportError: No module named tensorflow_transform
After some investigation, I think I have some ideas of the problem.
I run this:
%%bash
pip show tensorflow_transform| grep Location
This is the output
Location: /home/jupyter/.local/lib/python3.5/site-packages
I tried to modify the $PATH by adding /home/jupyter/.local/lib/python3.5/site-packages to the beginning of $PATH. However, I still failed to import tensorflow_transform.
Based on the above and the following information, I think, when I ran the import command, it executes Python 2.7, not Python 3.5
import sys
print('\n'.join(sys.path))
/usr/lib/python2.7
/usr/lib/python2.7/plat-x86_64-linux-gnu
/usr/lib/python2.7/lib-tk
/usr/lib/python2.7/lib-old
/usr/lib/python2.7/lib-dynload
/usr/local/lib/python2.7/dist-packages
/usr/lib/python2.7/dist-packages
/usr/local/lib/python2.7/dist-packages/IPython/extensions
/home/jupyter/.ipython
Also,
import sys
sys.executable
'/usr/bin/python2'
I think the problem is tensorflow_transform package was installed in /home/jupyter/.local/lib/python3.5/site-packages. But when I run "Import", it goes to /usr/local/lib/python2.7/dist-packages to search for the package, rather than /home/jupyter/.local/lib/python3.5/site-packages, so even updating $PATH does not help. Am I right?
I tried to upgrade my python, but
%%bash
pip install upgrade python
Defaulting to user installation because normal site-packages is not writeable
Then, I added --user. It seems that the python is not really upgraded.
%%bash
pip install --user upgrade python
%%bash
python -V
Python 2.7.13
Any solution?
It seems to me that your jupyter notebook is not using the right python environment.
Perhaps, you installed the package under version 3.5,
but the Notebook uses the other one, thus it cannot find the library
You can pick the other interpreter by clicking on: Python(your version) - bottom left.
VS-Code - Select Python Environment 1
However you can do this also via:
CNTRL+SHIFT+P > Select Python Interpreter to start Jupyter Server
If that does not work make sure that the package you are trying to import is installed under the correct python environment.
If not open up a terminal, activate the environment and install it using:
pip install packagename
For example i did the same thing here: (Note: I'm using Anaconda)
installing tensorflow_transform
After a installation, you can import it in your code directly like this:
importing tensorflow_transform
First, I may have more of an issue with correct environment selection. I did a fresh install of Linux Mint 19 and apt dist-upgrade... etc... and then used apt-get and pip to install pymysql, pil.intertk and pylint for both python and python3 from the cli...
All is good from cli:
~$ python3 --version
Python 3.6.5
~$ pylint3 --version
No config file found, using default configuration
pylint3 1.8.3,
astroid 1.6.0
Python 3.6.5 (default, Apr 1 2018, 05:46:30)
[GCC 7.3.0]
python3
Python 3.6.5 (default, Apr 1 2018, 05:46:30)
[GCC 7.3.0] on linux
Type "help", "copyright", "credits" or "license" for more information.
>>> import pymysql
>>> import PIL
>>>
After installing VSC.... the only two selection of python environments are 2.7.12 and 3.5.2 ?
I then modified VSC settings with: "python.pythonPath": "/usr/bin/python3"
Which still shows as Python 3.5.2 64-bit within VSC
But here comes my issue that I have tried many suggestions I have found from searching with no luck...
pylint is not finding any module I install. I assume its due to the mix match of version ? But not sure how to resolve that?
When I try to specify the pylint path : "python.linting.pylintPath": "/usr/bin/pylint3"
I get an invalid path error in VSC.. but its a valid path
~$ which pylint3
/usr/bin/pylint3
Any help would be greatly appreciated....
So after some frustrating trail and error I have fixed the issue by uninstalling the Flatpak version of Visual Studio Code listed in the Linux Mint's Software Center... and installing the deb package from the official site.
After installing the deb package... the proper version of python are showing and pylint is working correctly.
Granted I've been off PYTHON for two + years. I'm trying to get back into the swing, and I remember having command and variable completion available on windows a few years back. We were stuck in 2.6 as we had dependencies.
Today, I'm trying to import readline. I get this message from pip.
C:\Users\Joe>pip3 install readline
Collecting readline
Using cached https://files.pythonhosted.org/packages/f4/01/2cf081af8d880b44939a5f1b446551a7f8d59eae414277fd0c303757ff1b/readline-6.2.4.1.tar.gz
Complete output from command python setup.py egg_info:error: this module is not meant to work on Windows
my version is:
Python 3.7.0 (v3.7.0:1bf9cc5093, Jun 27 2018, 04:59:51) [MSC v.1914 64 bit (AMD64)] on win32
Type "help", "copyright", "credits" or "license" for more information.
import readline
Traceback (most recent call last):
File "", line 1, in
ModuleNotFoundError: No module named 'readline'
I have recently faced the same issue on Windows 10. readline is not available for Windows, however there is pyreadline3 (a continuation of the abandoned pyreadline package) which is for windows and you may try it.
Try to install pyreadline3 and use it instead of readline:
pip: pip install pyreadline3 or python -m pip install pyreadline
mamba: mamba install -c conda-forge pyreadline3
conda: conda install -c conda-forge pyreadline3
Then, in your python file do this:
from pyreadline3 import Readline
readline = Readline()
That way, you can use readline in Windows like in linux systems.
Go to your CMD terminal and type
pip install pyreadline
with in few seconds it will be installed and you will be able to see message i.e. "Successfully installed pyreadline-"
then go back to your PYSPARK terminal and type again import readline
it will import now without any error
Thanks
I tried pyreadline after finding this question and had problems and eventually found that it is no longer supported.
What worked for me was installing pyreadline3 with:
pip install pyreadline3
I have tried pip install psycopg2 and following errors i got:
Error:
(ScrapeProj) C:\Users\e2sn7cy\Documents\GitHub\scraper>pip install psycopg2==2.5.4
Collecting psycopg2==2.5.4
Using cached psycopg2-2.5.4.tar.gz
Complete output from command python setup.py egg_info:
running egg_info
creating pip-egg-info\psycopg2.egg-info
writing pip-egg-info\psycopg2.egg-info\PKG-INFO
writing top-level names to pip-egg-info\psycopg2.egg-info\top_level.txt
writing dependency_links to pip-egg-info\psycopg2.egg-info\dependency_links.txt
writing manifest file 'pip-egg-info\psycopg2.egg-info\SOURCES.txt'
warning: manifest_maker: standard file '-c' not found
Error: pg_config executable not found.
Please add the directory containing pg_config to the PATH
or specify the full executable path with the option:
python setup.py build_ext --pg-config /path/to/pg_config build ...
or with the pg_config option in 'setup.cfg'.
----------------------------------------
Command "python setup.py egg_info" failed with error code 1 in c:\users\e2sn7cy\appdata\local\temp\pi
p-build-joij3x\psycopg2
Then I tried using easy_install by downloading the .exe file from Stickpole and I got following errors :
(ScrapeProj) C:\Users\e2sn7cy\Envs\ScrapeProj\Scripts>easy_install psycopg2-2.6.1.win-amd64-py2.7-pg9
.4.4-release.exe
Processing psycopg2-2.6.1.win-amd64-py2.7-pg9.4.4-release.exe
psycopg2.tests.test_module: module references __file__
psycopg2.tests.test_types_basic: module references __file__
creating 'c:\users\e2sn7cy\appdata\local\temp\easy_install-sa7asq\psycopg2-2.6.1-py2.7-win32.egg' and
adding 'c:\users\e2sn7cy\appdata\local\temp\easy_install-sa7asq\psycopg2-2.6.1-py2.7-win32.egg.tmp'
to it
creating c:\users\e2sn7cy\envs\scrapeproj\lib\site-packages\psycopg2-2.6.1-py2.7-win32.egg
Extracting psycopg2-2.6.1-py2.7-win32.egg to c:\users\e2sn7cy\envs\scrapeproj\lib\site-packages
Adding psycopg2 2.6.1 to easy-install.pth file
Installed c:\users\e2sn7cy\envs\scrapeproj\lib\site-packages\psycopg2-2.6.1-py2.7-win32.egg
Processing dependencies for psycopg2==2.6.1
Finished processing dependencies for psycopg2==2.6.1
But when I again tried to install through pip I am getting a new message that its already there :
(ScrapeProj) C:\Users\e2sn7cy\Envs\ScrapeProj>pip install psycopg2
Requirement already satisfied (use --upgrade to upgrade): psycopg2 in c:\users\e2sn7cy\envs\scrapepro
j\lib\site-packages\psycopg2-2.6.1-py2.7-win32.egg
Then I thought ok I should try to import and then I got this error:
(ScrapeProj) C:\Users\e2sn7cy\Envs\ScrapeProj>python
Python 2.7.10 (default, May 23 2015, 09:40:32) [MSC v.1500 32 bit (Intel)] on win32
Type "help", "copyright", "credits" or "license" for more information.
>>> import psycopg2
Traceback (most recent call last):
File "<stdin>", line 1, in <module>
File "C:\Users\e2sn7cy\Envs\ScrapeProj\lib\site-packages\psycopg2-2.6.1-py2.7-win32.egg\psycopg2\__
init__.py", line 50, in <module>
from psycopg2._psycopg import BINARY, NUMBER, STRING, DATETIME, ROWID
ImportError: DLL load failed: %1 is not a valid Win32 application.
Now I am not able to understand what to do. Thanks
Edit 1:
I have also added my PostgreSQL path to system path variables
path:C:\Program Files\PostgreSQL\9.4
path:C:\Program Files\PostgreSQL\9.4\bin
The correct answer was given by Craig Ringer, I am just adding this because I came to know that we should first check which version of 64 bit or 32bit Python installed on our system. If you have 32 bit version of Python and if you will try to install 64bit, then you will get the above error on importing.
For checking the version:
import platform
platform.architecture()
and you will get an output like this:
('32bit','WindowsPE')
Download the pre-packaged binary release of psycopg2 for Windows rather than compiling it yourself. It's a pain to compile on Windows. This is explained in the install documentation for psycopg2.
You might need to remove your half-installed attempts.
Choose the appropriate version from this page:
http://www.stickpeople.com/projects/python/win-psycopg/
Right click and select copy link address
Back at home, use easy_install <<Paste URL Here>>
Freeze your new requirements: pip freeze > requirements.txt
Now that psycopg is in PyPI (as of March 2017 it appears), just fire up a command prompt with administrator privileges and install like so:
python -m pip install -U pip
python -m pip install psycopg2
If you don't have pip installed, follow the instructions here to do that first:
https://stackoverflow.com/a/12476379/2540707
pip install psycopg2-binary
This worked for me
Step 1: Compilers Installation and configuration
https://wiki.python.org/moin/WindowsCompilers
Before do anything, install or upgrade the Setuptools Python package. It contain compatibility improvements and add automatic use of compilers:
pip install --upgrade setuptools
Step 2: Download and install PostgreSQL
Before you continue to install python packages inside you virtualenvs download postgres itself. It contains files that are needed when compiling the psycopg2 python package. Just use the PostgreSQL installer(version 10 for example).
Important: add the postgres C:\Program Files\PostgreSQL\10\bin folder to your path. It contains the .dll needed for psycopg2.
Step 3: Install psycopg2
pip install psycopg2
Tested on Windows 7 + python 3.7
The best/easiest way of installing packages (including this problematic psycopg2 ) for python on windows platform is to:
1) install anaconda and ...
2) use Anaconda Navigator GUI to install/update packages.
By this one avoids many inconsistencies and conflicts that occurs among different packages versions and installations.