Postgresql: faster to SORT BY or sort after? - postgresql

Where I need entries returned from a postgresql table to be sorted based on the data in one of the columns, is it generally faster to do this as part of the query:
const arr = database.query("SELECT * FROM my_data WHERE key='a3zd' ORDER BY timestamp;");
... or to request unsorted data and then sort after:
const arr = database.query("SELECT * FROM my_data WHERE key='a3zd';");
arr.sort(function (a, b) { return a.timestamp - b.timestamp; });
Assume that the database and the processing code are hosted on the same server (in my case, docker / node.js) so there is no difference in terms of processing power for the sort operation.
My gut feeling is that the time taken for a sort operation will be roughly equivalent no matter where it is performed, but I don't know if the internal structures within a postgresql database makes it more efficient to do the sorting internally.
Does it make a difference whether or not the column on which the sort is carried out (timestamp here) is indexed? Or on the amount of data concerned (in my case there would typically be around 5000 entries to sort)?

Related

Multi Column Indexes with Order By and OR clause

I have below query to fetch list of tickets.
EXPLAIN select * from ticket_type
where ticket_type.event_id='89898'
and ticket_type.active=true
and (ticket_type.is_unlimited = true OR ticket_type.number_of_sold_tickets < ticket_type.number_of_tickets)
order by ticket_type.ticket_type_order
I have created below indexes but not working.
Index on (ticket_type_order,event_id,is_unlimited,active)
Index on (ticket_type_order,event_id,active,number_of_sold_tickets,number_of_tickets).
The perfect index for this query would be
CREATE INDEX ON ticket_type (event_id, ticket_type_order)
WHERE active AND (is_unlimited OR number_of_sold_tickets < number_of_tickets);
Of course, a partial index like that might only be useful for this specific query.
If the WHERE conditions from the index definition are not very selective, or a somewhat slower execution is also acceptable, you can omit parts of or the whole WHERE clause. That makes the index more widely useful.
What is the size of the table and usual query result? The server is usually smart enough and disables indexes, if it expects to return more than the half of the table.
Index makes no sense, if the result is rather small. If the server has - let say - 1000 records after several filtration steps, the server stops using indexes. It is cheaper the finish the query using CPU, then loading an index from HDD. As result, indexes are never applied to small tables.
Order by is applied at the very end of the query processing. The first field in the index should be one of the fields from the where filter.
Boolean fields are seldom useful in the index. It has only two possible values. Index should be created for fields with a lot of different values.
Avoid or filtering. It is easy in your case. Put a very big number into number_of_tickets, if the tickets are unlimited.
The better index in your case would be just event_id. If the database server supports functional indexes, then you can try to add number_of_tickets - number_of_sold_tickets. Rewrite the statement as where number_of_tickets - number_of_sold_tickets > 0
UPDATE: Postgresql calls it "Index on Expression":
https://www.postgresql.org/docs/current/indexes-expressional.html

Postgresql EXPLAIN command

I have a query that has several filter conditions after WHERE clause.
Also, most of the columns involved have indexes on them.
When I run EXPLAIN command, I see:
-> Bitmap Index Scan on feature_expr_idx (cost=0.00..8.10 rows=14 width=0)
feature_expr_idx is an index on one of the columns in WHERE clause.
But indexes for other columns are not shown. Instead, they are shown in FILTER row:
Filter: ((NOT is_deleted) AND (vehicle_type = 'car'::text) AND (source_type = 'NONE'::text))
Why only a single Index is shown in the result, while other columns also having index are instead part of Filter?
Postgresql has a clever engine which tries to plan the best way to run your query. Often, this involves reading as little as possible from disk, because disk operations are slow. One of the reasons why indexes are so helpful is that by reading from the index, we can find a small number of rows in the table that need to be read in order to satisfy the query, and thus we can avoid reading through the entire table. Note, however, that the index is also on disk, and so reading the index also takes some time.
Now, imagine your query has two filters, one over column A and one over column B, both of which are indexed. According to the statistics postgresql has collected, there are about 5 rows that satisfy the filter on column A, and about 1000 rows that satisfy the filter on column B. In that case, it makes sense to read only the index on column A, then read all the matching 5 (or so) rows, and filter out any of them which don't match the filter on column B. Reading the index on column B would probably be more expensive than just reading the 5 rows!
The actual reason may be different than my example, but the point is that postgresql is simply trying to be as efficient as possible.

Multiple indexes vs single index on multiple columns in postgresql

I could not reach any conclusive answers reading some of the existing posts on this topic.
I have certain data at 100 locations the for past 10 years. The table has about 800 million rows. I need to primarily generate yearly statistics for each location. Some times I need to generate monthly variation statistics and hourly variation statistics as well. I'm wondering if I should generate two indexes - one for location and another for year or generate one index on both location and year. My primary key currently is a serial number (Probably I could use location and timestamp as the primary key).
Thanks.
Regardless of how many indices have you created on relation, only one of them will be used in a certain query (which one depends on query, statistics etc). So in your case you wouldn't get a cumulative advantage from creating two single column indices. To get most performance from index I would suggest to use composite index on (location, timestamp).
Note, that queries like ... WHERE timestamp BETWEEN smth AND smth will not use the index above while queries like ... WHERE location = 'smth' or ... WHERE location = 'smth' AND timestamp BETWEEN smth AND smth will. It's because the first attribute in index is crucial for searching and sorting.
Don't forget to perform
ANALYZE;
after index creation in order to collect statistics.
Update:
As #MondKin mentioned in comments certain queries can actually use several indexes on the same relation. For example, query with OR clauses like a = 123 OR b = 456 (assuming that there are indexes for both columns). In this case postgres would perform bitmap index scans for both indexes, build a union of resulting bitmaps and use it for bitmap heap scan. In certain conditions the same scheme may be used for AND queries but instead of union there would be an intersection.
There is no rule of thumb for situations like these, I suggest you experiment in a copy of your production DB to see what works best for you: a single multi-column index or 2 single-column indexes.
One nice feature of Postgres is you can have multiple indexes and use them in the same query. Check this chapter of the docs:
... PostgreSQL has the ability to combine multiple indexes ... to handle cases that cannot be implemented by single index scans ....
... Sometimes multicolumn indexes are best, but sometimes it's better to create separate indexes and rely on the index-combination feature ...
You can even experiment creating both the individual and combined indexes, and checking how big each one is and determine if it's worth having them at the same time.
Some things that you can also experiment with:
If your table is too large, consider partitioning it. It looks like you could partition either by location or by date. Partitioning splits your table's data in smaller tables, reducing the amount of places where a query needs to look.
If your data is laid out according to a date (like transaction date) check BRIN indexes.
If multiple queries will be processing your data in a similar fashion (like aggregating all transactions over the same period, check materialized views so you only need to do those costly aggregations once.
About the order in which to put your multi-column index, put first the column on which you will have an equality operation, and later the column in which you have a range, >= or <= operation.
An index on (location,timestamp) should work better that 2 separate indexes for you case. Note that the order of the columns is important.

Query one document per association from MongoDB

I'm investigating how MongoDB would work for us. One of the most used queries is used to get latest (or from a given time) measurements for each station. There is thousands of stations and each station has tens of thousands of measurements.
So we plan to have one collection for stations and another for measurements.
In SQL we would do the query with
SELECT * FROM measurements
INNER JOIN (
SELECT max(meas_time) station_id
FROM measurements
WHERE meas_time <= 'time_to_query'
GROUP BY station_id
) t2 ON t2.station_id = measurements.station_id
AND t2.meas_time = measurements.meas_time
This returns one measurement for each station, and the measurement is the newest one before the 'time_to_query'.
What query should be used in MongoDB to produce the same result? We are really using Rails and MongoId, but it should not matter.
update:
This question is not about how to perform a JOIN in MongoDB. The fact that in SQL getting the right data out of the table requires a join doesn't necessary mean that in MongoDB we would also need a join. There is only one table used in the query.
We came up with this query
db.measurements.aggregate([{$group:{ _id:{'station_id':"$station_id"}, time:{$max:'$meas_time'}}}]);
with indexes
db.measurements.createIndex({ station_id: 1, meas_time: -1 });
Even though it seems to give the right data it is really slow. Takes roughly a minute to get a bit over 3000 documents from a collection of 65 million.
Just found that MongoDB is not using the index in this query even though we are using the 3.2 version.
I guess worst case solution would be something like this (out of my head):
meassures = []
StationId.all.each do |station|
meassurement = Meassurment.where(station_id: station.id, meas_time <= 'time_to_query').order_by(meas_time: -1).limit(1)
meassures << [station.name, meassurement.measure, ....]
end
It depends on how much time query can take. Data should anyway be indexed by station_id and meas_time.
How much time does the SQL query take?

MongoDB: does document size affect query performance?

Assume a mobile game that is backed by a MongoDB database containing a User collection with several million documents.
Now assume several dozen properties that must be associated with the user - e.g. an array of _id values of Friend documents, their username, photo, an array of _id values of Game documents, last_login date, count of in-game currency, etc, etc, etc..
My concern is whether creating and updating large, growing arrays on many millions of User documents will add any 'weight' to each User document, and/or slowness to the overall system.
We will likely never eclipse 16mb per document, but we can safely say our documents will be 10-20x larger if we store these growing lists directly.
Question: is this even a problem in MongoDB? Does document size even matter if your queries are properly managed using projection and indexes, etc? Should we be actively pruning document size, e.g. with references to external lists vs. embedding lists of _id values directly?
In other words: if I want a user's last_login value, will a query that projects/selects only the last_login field be any different if my User documents are 100kb vs. 5mb?
Or: if I want to find all users with a specific last_login value, will document size affect that sort of query?
One way to rephrase the question is to say, does a 1 million document query take longer if documents are 16mb vs 16kb each.
Correct me if I'm wrong, from my own experience, the smaller the document size, the faster the query.
I've done queries on 500k documents vs 25k documents and the 25k query was noticeably faster - ranging anywhere from a few milliseconds to 1-3 seconds faster. On production the time difference is about 2x-10x more.
The one aspect where document size comes into play is in query sorting, in which case, document size will affect whether the query itself will run or not. I've reached this limit numerous times trying to sort as little as 2k documents.
More references with some solutions here:
https://docs.mongodb.org/manual/reference/limits/#operations
https://docs.mongodb.org/manual/reference/operator/aggregation/sort/#sort-memory-limit
At the end of the day, its the end user that suffers.
When I attempt to remedy large queries causing unacceptably slow performance. I usually find myself creating a new collection with a subset of data, and using a lot of query conditions along with a sort and a limit.
Hope this helps!
First of all you should spend a little time reading up on how MongoDB stores documents with reference to padding factors and powerof2sizes allocation:
http://docs.mongodb.org/manual/core/storage/
http://docs.mongodb.org/manual/reference/command/collStats/#collStats.paddingFactor
Put simply MongoDB tries to allocate some additional space when storing your original document to allow for growth. Powerof2sizes allocation became the default approach in version 2.6, where it will grow the document size in powers of 2.
Overall, performance will be much better if all updates fit within the original size allocation. The reason is that if they don't, the entire document needs to be moved someplace else with enough space, causing more reads and writes and in effect fragmenting your storage.
If your documents are really going to grow in size by a factor of 10X to 20X overtime that could mean multiple moves per document, which depending on your insert, update and read frequency could cause issues. If that is the case there are a couple of approaches you can consider:
1) Allocate enough space on initial insertion to cover most (let's say 90%) of normal documents lifetime growth. While this will be inefficient in space usage at the beginning, efficiency will increase with time as the documents grow without any performance reduction. In effect you will pay ahead of time for storage that you will eventually use later to get good performance over time.
2) Create "overflow" documents - let's say a typical 80-20 rule applies and 80% of your documents will fit in a certain size. Allocate for that amount and add an overflow collection that your document can point to if they have more than 100 friends or 100 Game documents for example. The overflow field points to a document in this new collection and your app only looks in the new collection if the overflow field exists. Allows for normal document processing for 80% of the users, and avoids wasting a lot of storage on the 80% of user documents that won't need it, at the expense of additional application complexity.
In either case I'd consider using covered queries by building the appropriate indexes:
A covered query is a query in which:
all the fields in the query are part of an index, and
all the fields returned in the results are in the same index.
Because the index “covers” the query, MongoDB can both match the query
conditions and return the results using only the index; MongoDB does
not need to look at the documents, only the index, to fulfill the
query.
Querying only the index can be much faster than querying documents
outside of the index. Index keys are typically smaller than the
documents they catalog, and indexes are typically available in RAM or
located sequentially on disk.
More on that approach here: http://docs.mongodb.org/manual/tutorial/create-indexes-to-support-queries/
Just wanted to share my experience when dealing with large documents in MongoDB... don't do it!
We made the mistake of allowing users to include files encoded in base64 (normally images and screenshots) in documents. We ended up with a collection of ~500k documents ranging from 2 Mb to 10 Mb each.
Doing a simple aggregate in this collection would bring down the cluster!
Aggregate queries can be very heavy in MongoDB, especially with large documents like these. Indexes in aggregates can only be used in some conditions and since we needed to $group, indexes were not being used and MongoDB would have to scan all the documents.
The exact same query in a collection with smaller sized documents was very fast to execute and the resource consumption was not very high.
Hence, querying in MongoDB with large documents can have a big impact in performance, especially aggregates.
Also, if you know that the document will continue to grow after it is created (e.g. like including log events in a given entity (document)) consider creating a collection for these child items because the size can also become a problem in the future.
Bruno.
Short answer: yes.
Long answer: how it will affect the queries depends on many factors, like the nature of the queries, the memory available and the indices sizes.
The best you can do is testing.
The code bellow will generate two collections named smallDocuments and bigDocuments, with 1024 documents each, being different only by a field 'c' containing a big string and the _id. The bigDocuments collection will have about 2GB, so be careful running it.
const numberOfDocuments = 1024;
// 2MB string x 1024 ~ 2GB collection
const bigString = 'a'.repeat(2 * 1024 * 1024);
// generate and insert documents in two collections: shortDocuments and
// largeDocuments;
for (let i = 0; i < numberOfDocuments; i++) {
let doc = {};
// field a: integer between 0 and 10, equal in both collections;
doc.a = ~~(Math.random() * 10);
// field b: single character between a to j, equal in both collections;
doc.b = String.fromCharCode(97 + ~~(Math.random() * 10));
//insert in smallDocuments collection
db.smallDocuments.insert(doc);
// field c: big string, present only in bigDocuments collection;
doc.c = bigString;
//insert in bigDocuments collection
db.bigDocuments.insert(doc);
}
You can put this code in a file (e.g. create-test-data.js) and run it directly in the mongoshell, typing this command:
mongo testDb < create-test-data.js
It will take a while. After that you can execute some test queries, like these ones:
const numbersToQuery = [];
// generate 100 random numbers to query documents using field 'a':
for (let i = 0; i < 100; i++) {
numbersToQuery.push(~~(Math.random() * 10));
}
const smallStart = Date.now();
numbersToQuery.forEach(number => {
// query using inequality conditions: slower than equality
const docs = db.smallDocuments
.find({ a: { $ne: number } }, { a: 1, b: 1 })
.toArray();
});
print('Small:' + (Date.now() - smallStart) + ' ms');
const bigStart = Date.now();
numbersToQuery.forEach(number => {
// repeat the same queries in the bigDocuments collection; note that the big field 'c'
// is ommited in the projection
const docs = db.bigDocuments
.find({ a: { $ne: number } }, { a: 1, b: 1 })
.toArray();
});
print('Big: ' + (Date.now() - bigStart) + ' ms');
Here I got the following results:
Without index:
Small: 1976 ms
Big: 19835 ms
After indexing field 'a' in both collections, with .createIndex({ a: 1 }):
Small: 2258 ms
Big: 4761 ms
This demonstrates that queries on big documents are slower. Using index, the result time from bigDocuments is more than 100% bigger than in smallDocuments.
My sugestions are:
Use equality conditions in queries (https://docs.mongodb.com/manual/core/query-optimization/index.html#query-selectivity);
Use covered queries (https://docs.mongodb.com/manual/core/query-optimization/index.html#covered-query);
Use indices that fit in memory (https://docs.mongodb.com/manual/tutorial/ensure-indexes-fit-ram/);
Keep documents small;
If you need phrase queries using text indices, make sure the entire collection fits in memory (https://docs.mongodb.com/manual/core/index-text/#storage-requirements-and-performance-costs, last bullet);
Generate test data and make test queries, simulating your app use case; use random strings generators if needed.
I had problems with text queries in big documents, using MongoDB: Autocomplete and text search memory issues in apostrophe-cms: need ideas
Here there is some code I wrote to generate sample data, in ApostropheCMS, and some test results: https://github.com/souzabrs/misc/tree/master/big-pieces.
This is more a database design issue than a MongoDB internal one. I think MongoDB was made to behave this way. But, it would help a lot to have more obvious explanation in its documentation.