KOSKK network model in NetLogo - netlogo

I am trying to replicate the KOSKK model (Kumpula et al. 2007) in NetLogo but I am stuck.
The original algorithm is:
(I) Select a node i randomly, and
(a) select a friend’s friend k (by weighted search) and introduce
it to i with prob. p_1 (with initial tie strength w_0) if not already
acquainted. Increase tie strengths by "d" along the search path, as
well as on the link l_{ik} if it was already present.
(b) Additionally, with prob. p_r (or with prob. 1 if i has no connections), connect i to a random node j (with tie strength w_0).
(II) Select a random node and with prob. p_d remove all of its ties.
In particular, I am struggling to write correctly the initial step I-a. How can I tell the program to pick the friend k of a friend j (!= myself, i) in the highest weighted path (l_{ij},l_{jk})?

Related

How to get a new solution with high probability from previously found, incomplete solutions with different probabilities?

I am working on a AI algorithm. first when program runs a random solution is generated from which ,in first iteration of the program 10 solution vectors are created, by analyzing these solutions we could give each of them a probability ( highest , second highest, third highest and so on) towards the optimal solution , for the second input of the program I want it to be a vector (possible solution) obtained from those 10 vectors previously found. But i need the vector solution to consider all the previous solutions with a different impact depending on their probability ...
i.e A=[4.7 ,5.6, 3.5,9 ] b=[-7.9 ,8 ,-2.8 ,4.6] c=[7 ,9.7 , 4,6,3.9] ......
i used mean in my program
NextPossibleSolution = mean(([A;B;C;]))
But do you think mean is the right move ? i don't think because all the solution contributes equal to Next Possible Solution (next input) regardless of their likelihood ... Please if there is a method formula or anything , Let me know that ... I really need it badly .... A Billion Thanks

network security- cryptography

I was solving a RSA problem and facing difficulty to compute d
plz help me with this
given p-971, q-52
Ø(n) - 506340
gcd(Ø(n),e) = 1 1< e < Ø(n)
therefore gcd(506340, 83) = 1
e= 83 .
e * d mod Ø(n) = 1
i want to compute d , i have all the info
can u help me how to computer d from this.
(83 * d) mod 506340 = 1
i am a little wean in maths so i am having difficulties finding d from the above equation.
Your value for q is not prime 52=2^2 * 13. Therefore you cannot find d because the maths for calculating this relies upon the fact the both p and q are prime.
I suggest working your way through the examples given here http://en.wikipedia.org/wiki/RSA_%28cryptosystem%29
Normally, I would hesitate to suggest a wikipedia link such as that, but I found it very useful as a preliminary source when doing a project on RSA as part of my degree.
You will need to be quite competent at modular arithmetic to get to grips with how RSA works. If you want to understand how to find d you will need to learn to find the Modular multiplicative inverse - just google this, I didn't come across anything incorrect when doing so myself.
Good luck.
A worked example
Let's take p=11, q=5. In reality you would use very large primes but we are going to be doing this by hand to we want smaller numbers. Keep both of these private.
Now we need n, which is given as n=pq and so in our case n=55. This needs to be made public.
The next item we need is the totient of n. This is simply phi(n)=(p-1)(q-1) so for our example phi(n)=40. Keep this private.
Now you calculate the encryption exponent, e. Defined such that 1<e<phi(n) and gcd(e,phi(n))=1. There are nearly always many possible different values of e - just pick one (in a real application your choice would be determined by additional factors - different choices of e make the algorithm easier/harder to crack). In this example we will choose e=7. This needs to be made public.
Finally, the last item to be calculated is d, the decryption exponent. To calculate d we must solve the equation ed mod phi(n) = 1. This is most commonly calculated using the Extended Euclidean Algorithm. This algorithm solves the equation phi(n)x+ed=1 subject to 1<d<phi(n), where x is an unknown multiplicative factor - which is identical to writing the previous equation without using mod. In our particular example, solving this leads to d=23. This should be kept private.
Then your public key is: n=55, e=7
and your private key is: n=55, d=23
To see the workthrough of the Extended Euclidean Algorithm check out this youtube video https://www.youtube.com/watch?v=kYasb426Yjk. The values used in that video are the same as the ones used here.
RSA is complicated and the mathematics gets very involved. Try solving a couple of examples with small values of p and q until you are comfortable with the method before attempting a problem with large values.

Clusters merge threshold

I'm working with Mean shift, this procedure calculates where every point in the data set converges. I can also calculate the euclidean distance between the coordinates where 2 distinct points converged but I have to give a threshold, to say, if (distance < threshold) then this points belong to the same cluster and I can merge them.
How can I find the correct value to use as threshold??
(I can use every value and from it depends the result, but I need the optimal value)
I've implemented mean-shift clustering several times and have run into this same issue. Depending on how many iterations you're willing to shift each point for, or what your termination criteria is, there is usually some post-processing step where you have to group the shifted points into clusters. Points that theoretically shift to the same mode need not practically end up on directly top of each other.
I think the best and most general way to do this is to use a threshold based on the kernel bandwidth, as suggested in the comments. In the past my code to do this post processing has usually looked something like this:
threshold = 0.5 * kernel_bandwidth
clusters = []
for p in shifted_points:
cluster = findExistingClusterWithinThresholdOfPoint(p, clusters, threshold)
if cluster == null:
// create new cluster with p as its first point
newCluster = [p]
clusters.add(newCluster)
else:
// add p to cluster
cluster.add(p)
For the findExistingClusterWithinThresholdOfPoint function I usually use the minimum distance of p to each currently defined cluster.
This seems to work pretty well. Hope this helps.

To find the largest edge in the path between two given nodes / vertices

I am trying to update a MST by adding a new vertex in the MST. For this, I have been following "Updating Spanning Tree" by Chin and Houck. http://www.computingscience.nl/docs/vakken/al/WerkC/UpdatingSpanningTrees.pdf
A step in the paper requires me to find the largest edge in the path/paths between two given vertices. My idea is to find all the possible paths between the vertices and then, subsequently find the largest edge from the paths. I have been trying to implement this in MATLAB. However, so far, I have been unsuccessful. Any lead / clear algorithm to find all paths between two vertices or even the largest edge in the path between two given nodes/ vertices would be really welcome.
For reference, I would like to put forward an example. If the graph has following edges 1-2, 1-3, 2-4 and 3-4, the paths between 4 and 4 are:
1) 4-2-1-3-4
2) 4-3-1-2-4
Thank you
The algorithm works by lowering the t value to exclude large edges from the new MST. When the algorithm completes, t will be the lowest edge that remains to be inserted to complete the MST.
The m value represents the largest edge on a path from r to z, local to each run of INSERT. m is lowered at each iteration of the loop if possible, thereby removing the previous m edge as a possible candidate for t.
It's not easy to explain in words, I recommend doing a run of the algorithm on paper until the steps are clear.
I made a quick attempt to sketch the steps here: http://jacob.midtgaard-olesen.dk/?p=140
But basically, the algorithm adds edges from the old MST unless it finds a smaller edge to add between the new node z and another node in the old MST. In the example, the edge (A,B) is not in the new tree, since a better connection to B was found by the algorithm.
Note that on selecting h and k, if t and (w,r) have equal edge value, I believe you should choose (w,r)
Finally you should probably go trough the proof following the algorithm to understand why the algorithm works. (I didn't read it all :) )

Dijkstra's algorithm with negative weights

Can we use Dijkstra's algorithm with negative weights?
STOP! Before you think "lol nub you can just endlessly hop between two points and get an infinitely cheap path", I'm more thinking of one-way paths.
An application for this would be a mountainous terrain with points on it. Obviously going from high to low doesn't take energy, in fact, it generates energy (thus a negative path weight)! But going back again just wouldn't work that way, unless you are Chuck Norris.
I was thinking of incrementing the weight of all points until they are non-negative, but I'm not sure whether that will work.
As long as the graph does not contain a negative cycle (a directed cycle whose edge weights have a negative sum), it will have a shortest path between any two points, but Dijkstra's algorithm is not designed to find them. The best-known algorithm for finding single-source shortest paths in a directed graph with negative edge weights is the Bellman-Ford algorithm. This comes at a cost, however: Bellman-Ford requires O(|V|·|E|) time, while Dijkstra's requires O(|E| + |V|log|V|) time, which is asymptotically faster for both sparse graphs (where E is O(|V|)) and dense graphs (where E is O(|V|^2)).
In your example of a mountainous terrain (necessarily a directed graph, since going up and down an incline have different weights) there is no possibility of a negative cycle, since this would imply leaving a point and then returning to it with a net energy gain - which could be used to create a perpetual motion machine.
Increasing all the weights by a constant value so that they are non-negative will not work. To see this, consider the graph where there are two paths from A to B, one traversing a single edge of length 2, and one traversing edges of length 1, 1, and -2. The second path is shorter, but if you increase all edge weights by 2, the first path now has length 4, and the second path has length 6, reversing the shortest paths. This tactic will only work if all possible paths between the two points use the same number of edges.
If you read the proof of optimality, one of the assumptions made is that all the weights are non-negative. So, no. As Bart recommends, use Bellman-Ford if there are no negative cycles in your graph.
You have to understand that a negative edge isn't just a negative number --- it implies a reduction in the cost of the path. If you add a negative edge to your path, you have reduced the cost of the path --- if you increment the weights so that this edge is now non-negative, it does not have that reducing property anymore and thus this is a different graph.
I encourage you to read the proof of optimality --- there you will see that the assumption that adding an edge to an existing path can only increase (or not affect) the cost of the path is critical.
You can use Dijkstra's on a negative weighted graph but you first have to find the proper offset for each Vertex. That is essentially what Johnson's algorithm does. But that would be overkill since Johnson's uses Bellman-Ford to find the weight offset(s). Johnson's is designed to all shortest paths between pairs of Vertices.
http://en.wikipedia.org/wiki/Johnson%27s_algorithm
There is actually an algorithm which uses Dijkstra's algorithm in a negative path environment; it does so by removing all the negative edges and rebalancing the graph first. This algorithm is called 'Johnson's Algorithm'.
The way it works is by adding a new node (lets say Q) which has 0 cost to traverse to every other node in the graph. It then runs Bellman-Ford on the graph from point Q, getting a cost for each node with respect to Q which we will call q[x], which will either be 0 or a negative number (as it used one of the negative paths).
E.g. a -> -3 -> b, therefore if we add a node Q which has 0 cost to all of these nodes, then q[a] = 0, q[b] = -3.
We then rebalance out the edges using the formula: weight + q[source] - q[destination], so the new weight of a->b is -3 + 0 - (-3) = 0. We do this for all other edges in the graph, then remove Q and its outgoing edges and voila! We now have a rebalanced graph with no negative edges to which we can run dijkstra's on!
The running time is O(nm) [bellman-ford] + n x O(m log n) [n Dijkstra's] + O(n^2) [weight computation] = O (nm log n) time
More info: http://joonki-jeong.blogspot.co.uk/2013/01/johnsons-algorithm.html
Actually I think it'll work to modify the edge weights. Not with an offset but with a factor. Assume instead of measuring the distance you are measuring the time required from point A to B.
weight = time = distance / velocity
You could even adapt velocity depending on the slope to use the physical one if your task is for real mountains and car/bike.
Yes, you could do that with adding one step at the end i.e.
If v ∈ Q, Then Decrease-Key(Q, v, v.d)
Else Insert(Q, v) and S = S \ {v}.
An expression tree is a binary tree in which all leaves are operands (constants or variables), and the non-leaf nodes are binary operators (+, -, /, *, ^). Implement this tree to model polynomials with the basic methods of the tree including the following:
A function that calculates the first derivative of a polynomial.
Evaluate a polynomial for a given value of x.
[20] Use the following rules for the derivative: Derivative(constant) = 0 Derivative(x) = 1 Derivative(P(x) + Q(y)) = Derivative(P(x)) + Derivative(Q(y)) Derivative(P(x) - Q(y)) = Derivative(P(x)) - Derivative(Q(y)) Derivative(P(x) * Q(y)) = P(x)*Derivative(Q(y)) + Q(x)*Derivative(P(x)) Derivative(P(x) / Q(y)) = P(x)*Derivative(Q(y)) - Q(x)*Derivative(P(x)) Derivative(P(x) ^ Q(y)) = Q(y) * (P(x) ^(Q(y) - 1)) * Derivative(Q(y))